ID GU723708; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC GU723708; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate NT1-1 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT "Molecular diversity and pathogenicity of tomato-infecting begomoviruses in RT Taiwan"; RL Unpublished. XX RN [2] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT ; RL Submitted (08-FEB-2010) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; a0234a420d37200689b04925b3c587b1. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="NT1-1" FT /mol_type="genomic DNA" FT /country="Taiwan:Puli, Nantou" FT /collection_date="2007" FT /db_xref="taxon:196093" FT CDS 132..473 FT /codon_start=1 FT /product="V2 protein" FT /db_xref="GOA:D5KY88" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D5KY88" FT /protein_id="ADE09029.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSEFRQPIWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT CDS 292..1065 FT /codon_start=1 FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:Q09M61" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09M61" FT /protein_id="ADE09026.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1062..1466) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:D5KY90" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KY90" FT /protein_id="ADE09028.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPQTSHFLRVFKYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVTEGTVDAQFSHIIKFKIY" FT CDS complement(1207..1614) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:D5KY91" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KY91" FT /protein_id="ADE09027.1" FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQSETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT CDS complement(1514..2602) FT /codon_start=1 FT /product="C1 protein" FT /note="replication-associated protein" FT /db_xref="GOA:D5KY92" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D5KY92" FT /protein_id="ADE09025.1" FT /translation="MPQLNKFRINAKNYFLTYPHCSLTKEEALSQIQSIQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT DKDGDVLDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNNNLDRIFAPPLEVYISPFNSSSFDQVPIELVEWVTENVRDSAARPWRPMSIVLEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL FT YSRANQGPTQNSEEETNSQTEG" FT CDS complement(2152..2445) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D5KY93" FT /protein_id="ADE09030.1" FT /translation="MGLLTCTFSSNSKENSNVKITGSSTSHPQPGQHISIRTFRELRAQ FT QMSKPIWTKTETYLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2740 BP; 724 A; 529 C; 611 G; 876 T; 0 other; accggatggc cgcgaatttt ttaagtgggt cctacgcact aatgttggtc ggccaataga 60 aacgctccct caaagcttat taacaaaaat atccgttata aatacttggt ggctaagtta 120 cagtcggtaa aatgtgggat ccacttttaa atgattttcc ggagtctgta catggtctac 180 ggtgtatgct tgccattaag tatctacatc ttgtagaaaa tacatattcc ccggatactt 240 tgggttacga tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 300 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg tctgaatttc 360 gccagcccat atggcaaccg tgtagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcctc gtggttgtga aggcccatgt aaggtacagt catttgaaca gcgtcatgat 540 atatcccatg tgggtaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagcactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgacgattc 840 caggctacgg tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata cgataaccat 960 acagagaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaactgagc atcgactgtg ccctctgtta cattgtatag tacatgtctc 1140 attgctctaa atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1200 tggtacttaa ataccctcaa gaaatgcgag gtctgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gttccgtaga aatggtctct gattgtgttg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgaga atccatgtga tgcgcagtta attccaagat aataagagca 1500 cccacaagga agatcaaccc tccgtctgcg aattggtctc ttcttcgcta ttttgtgttg 1560 gaccttgatt ggcacgtgag tagagtggct cggtgagggt gatgaattcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg atcgacgtca tcaatgacgt tgtaccatgc ctcattgttg tagactcttg 1860 ggcttaggtc aagatgccca cacaagtaat tgtgtgggcc tagagacctg gcccaaagtg 1920 tcttccctgt acgactctct ccctctaaca caatactcat gggtctccat ggccgcgcag 1980 cggaatccct cacgttctcg gtaacccatt ctacaagttc tattggaact tgatcaaatg 2040 aagaagaatt aaaaggagaa atataaacct ccaatggagg tgcaaaaatc ctatctaaat 2100 tattatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc cttaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaat tccatgatca agtacgtctc 2280 cgtctttgtc catataggtt ttgacatctg ttgagctctt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa cctgttattt ttacattgga 2400 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg tgaagctctc 2460 tgcaaaccct aatgaatagc ttatttgttg gtgtttgtat agattgtatt tgggaaagtg 2520 cctcttcttt ggttagggag cagtgtggat atgtgaggaa gtagttcttt gcatttatcc 2580 tgaatttatt aagttgaggc atgttgactt ggtcaattgg tgtctctcaa acttctctat 2640 gtatcggtgt attggggtct tatttatatc tggacactaa atggcattta tgtaattaca 2700 taaaattacc aatgggtaaa gcggccatcc gtttaatatt 2740 //