ID GU584185; SV 1; linear; genomic RNA; STD; VRL; 4794 BP. XX AC GU584185; XX DT 24-MAR-2010 (Rel. 104, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Watermelon bud necrosis virus strain JT segment M, complete sequence. XX KW . XX OS Watermelon bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4794 RX DOI; 10.1007/s00705-010-0881-z. RX PUBMED; 21184244. RA Li J.T., Yeh Y.C., Yeh S.D., Raja J.A., Rajagopalan P.A., Liu L.Y., RA Chen T.C.; RT "Complete genomic sequence of watermelon bud necrosis virus"; RL Arch. Virol. 156(2):359-362(2011). XX RN [2] RP 1-4794 RA Chen T.-C., Li J.-T., Yeh Y.-C.; RT ; RL Submitted (29-JAN-2010) to the INSDC. RL Biotechnology, Asia University, 500, Lioufeng Rd., Wufeng, Taichung 41354, RL Taiwan XX DR MD5; 2db8f7d7eed360ea10c6c94ede6e029b. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..4794 FT /organism="Watermelon bud necrosis virus" FT /segment="M" FT /host="Citrullus lanatus (watermelon)" FT /strain="JT" FT /mol_type="genomic RNA" FT /country="India" FT /collection_date="30-May-2008" FT /db_xref="taxon:76052" FT CDS 56..979 FT /codon_start=1 FT /product="nonstructural NSm protein" FT /note="movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:D4P8G1" FT /protein_id="ADD83167.1" FT /translation="MSRFSNVIESFRSSKNSSKELVPAVKTENNKNILARNVSQKDIDT FT AIMNKVKTLNGNQYISGGDSSVLGTYSGESEIEASSDDILSRLVIEQSAHLSNWKNDSL FT VGNGNDKVSFTINVMPTWNSKRKFMHISRLIIWVVPTIPDTKNNVKITLIDPNKMTKEE FT KIILSRQCSLKDPMCFIFHLNWSFPKERNTPGQCMRLNLTSDEKYAKGVSFASVMYSWV FT KNFCDTPIASENNTCDVVPINRAKVIQSAALIEACKLMIPRGTSGKAIANQIKSLQKAA FT EKLALESEQEEKDIDVDIEMDSLLEI" FT CDS complement(1382..4747) FT /codon_start=1 FT /product="envelope glycoprotein" FT /db_xref="GOA:D4P8G2" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:D4P8G2" FT /protein_id="ADD83168.1" FT /translation="MKKYYLPIYCLSLYLLFLASEVYLLNQVDNNDQLRRIQDRYKVDD FT PEDLIETEEYIPAETTKLKQKKLSRILRNGETTTQSPTPSLNCDNFEKKHCMIKGVSEF FT NAHYQIDNGEEIISCISSSSNIFDICQYEREFRKTKFKNFPVVPVLKLENKKVLEIGTK FT FFFVDKSNNPINVDPKVNLKSPTVARLTVRLSGDCKINQVSMSSPYQIKLRSEENIGVL FT IKNVKNPKSESIKSITGDSTINFKPEELDGNHFLLCGDKSSLIAKVDIPVRNCVAKYSE FT EPKKIFFCANFSYFKWIFVFLTIAFPISWLIWKTKNALSIWYDIIGILTYPILWAINWL FT WPYFPFKCRVCGCVSFLTHSCAEKCVCNQERASKTHTDDCYLFNRSKVEWRKLTLIQQF FT QFIINTKLSTNFLVLITKMILASILISYIPSSIALKQPNLCVEKCYYNLNLDSLTTDKF FT GMADNGYETCECSIGNVITETVYRSGVPMSRATALNDCVLGSELCLVSNNQAQNLFACR FT NGCNSLASIKNIPNTKFNKFYKGKSFKGNLTSLKIANRLRDGYMDSPIESKILEEESIK FT EYKFYKSLKVDDVPPENLMPRQSLVFSTEVDGKYRYLLEMDIKANAGSVYLLSDDAAHS FT PMEFMVYVKSVGVEYDVRYKYSTAKIDTTVADYLVICTGSCADCVKQKPKVGVLDFCVT FT PTSWWGCEELGCLAINEGSICGHCTNIYDLSSLVNIYQVVESHVTAEICIKSLDGYTCK FT KHSDRSPIQTDYYQLDMSIDLHNDYMSTDKLFAVTKQQKILTGNIADLGDFSGSSFGHP FT QITIDGVPLSVPATLSQNDFTWSCSAVGDKKVNIKQCGLYTYSAIYILSPSKDVSHLDE FT NSNKLYMEKDFLVGKLKMVIDMPKEMFKKIPTKPVLSEVKMTCSGCAQCAAGIDCNITY FT TSDTTFSSRLVMDTCSFKSDQLGTFLGPNEKSIKVYCSEEISDKSLKLIPEDQEELTVD FT IQVDEFTEVDQDTIIHFDDKSAHDEKIHHSDTSISSLWDWIKAPFNWVASFFGTFFDLV FT RIILVITAACIGLYILSSIFRLSKTYYADRRRQKLEDAIESIESSVLLTNCTGVDQARK FT RKSPPKGYDFSLDI" XX SQ Sequence 4794 BP; 1519 A; 851 C; 827 G; 1597 T; 0 other; agagcaatcg gtgcgccaat tactagataa atcatcaaat aattaacaag aaataatgtc 60 tcgcttttct aacgtgatag aatctttccg ttcttcaaag aactcaagca aagagttggt 120 gcctgctgta aaaacagaaa acaataagaa tattctagct agaaatgttt ctcagaagga 180 tattgatact gctataatga acaaagttaa gacactgaat ggaaatcagt atatttcagg 240 aggagattct agtgttttgg gcacttattc tggtgaatcg gaaatagaag catcttctga 300 cgatattcta tccaggctag ttattgagca gagcgctcac ttaagcaact ggaaaaatga 360 ttcacttgtt ggaaatggaa atgataaggt gagtttcacc ataaatgtta tgccaacatg 420 gaacagtaag cgtaaattca tgcacatatc aagactcata atttgggttg tccctacaat 480 ccctgacact aaaaacaatg ttaaaattac tttgattgac ccaaacaaaa tgaccaaaga 540 agagaaaata atactgagca gacaatgctc attaaaagat cctatgtgtt ttatcttcca 600 tcttaattgg tcattcccga aagaaagaaa cactcctggg cagtgcatga ggcttaatct 660 gactagtgat gagaaatatg caaaaggagt tagctttgcc tctgtcatgt attcttgggt 720 gaagaacttc tgcgatactc ctattgcatc agaaaataac acttgtgatg ttgtgcctat 780 caatagagct aaggtcattc aatctgctgc attaatcgaa gcatgcaagt taatgatacc 840 tagaggaact agtgggaaag caatagctaa tcagattaag agtttgcaga aagctgcaga 900 aaagctagct ttagaatcag aacaagaaga aaaagatatt gatgtcgata tagagatgga 960 tagccttctt gaaatttaag attactgatt ttaagtctga attatatcta ccaaccaagc 1020 tctaattacg tttatttcga ataatttaag tttagaagtt tgtgttactt ataagagtat 1080 attatgatct gctattcgaa tgtttgtgtg tttgtgtatc tatgtattgt gttatgtttt 1140 atctttagaa ataagataag caaaaactaa acaaaaatta aaataagtaa aaacaacaaa 1200 aaaagagaaa aacaaaacaa aaaacaaaaa actatatata tataaataaa caaggcctag 1260 gccaactttg gcttttcagc ctttttttgg attttgttgt tttatattgt ttttggtttt 1320 tttgtctgtt ttgaatatat atatatatat atatattttg caaattaact cacattcaga 1380 attaaatatc taaagaaaaa tcataacctt taggagggga tttcctcttc cttgcctgat 1440 ctactcctgt gcaatttgtc aaaagaacac ttgattctat ggattcaatg gcatcttcta 1500 atttttgcct tcttctatct gcataatatg tcttagataa tctgaaaatg ctacttagaa 1560 tatacaatcc gatacatgct gctgtaatga ccaagataat cctgactaga tcgaagaaag 1620 tgccgaagaa agaagctacc caattgaagg gtgccttgat ccagtcccat aaactggaaa 1680 tagatgtatc agaatgatgt atcttttcat catgtgcact tttatcatca aaatgtatta 1740 ttgtatcttg atcaacttca gtaaactcat ccacctgaat gtccactgtc aattcttctt 1800 gatcctctgg gattaacttc agagatttgt ctgagatttc ttcagagcaa taaaccttga 1860 tagatttttc atttggacct agaaatgttc ctaattgatc agatttaaaa gagcatgtat 1920 ccatgactaa tcttgatgaa aatgtagtgt ctgacgtgta agttatattg caatcaattc 1980 ctgcagcaca ttgagcacaa cctgaacagg tcattttaac ctcagacaga acaggctttg 2040 ttgggatctt tttaaacatt tccttgggca tatctatgac cattttcaat ttacccacta 2100 aaaaatcctt ctccatgtac agtttgttac tattctcatc taagtgagat acatctttgg 2160 atggagataa gatatagatg gcactgtatg tgtaaagccc acattgcttt atattaactt 2220 ttttatcccc aacagcacta caactccagg taaaatcatt ttgagacaaa gttgctggga 2280 ctgatagtgg aacaccatct attgtgatct gaggatgtcc aaacgatgat cctgaaaaat 2340 cccccaagtc agctatgttg cctgtaagaa ttttctgctg tttagtcaca gcaaatagtt 2400 tatcagtgct catataatcg ttgtgaagat ctatggacat gtcgagttga tagtaatctg 2460 tttggatagg agatctgtct gagtgttttt tgcatgtgta tccatctaaa gattttatgc 2520 agatctcagc agtaacatgg ctctcaacaa cctgatagat gttgaccaag cttgacaagt 2580 cataaatgtt cgtacaatgc ccacagatgg atccttcgtt aattgctaga caaccaagtt 2640 cttcacagcc ccaccaagag gttggtgtta cacagaagtc taaaactccc actttaggtt 2700 tttgctttac acagtcagca caactccctg tgcatattac taggtaatct gccactgttg 2760 tgtcaatctt tgctgtggaa tatttgtacc tcacatcata ttcaacacca acacttttta 2820 cataaaccat aaactccatg ggagaatgtg ctgcatcgtc actgagtaag taaactgatc 2880 ccgcatttgc ttttatgtcc atttccaaga ggtatctata ttttccatca acttcagttg 2940 agaacaccaa agattgtctt ggcattaaat tctcaggagg tacatcatcg acctttaagc 3000 ttttataaaa tttatattct ttgatagatt cttcttccag gattttagat tcaattgggc 3060 tgtccatgta accatctctt aatctattag ctatcttcag actagtgaga ttgcctttaa 3120 aagatttccc tttgtagaat ttattaaatt tggtgtttgg tatatttttt atggatgcca 3180 aagagttgca accatttctg catgcaaaca aattttgagc ttggttattg ctcaccaaac 3240 acaattctga acccaaaaca caatcgttca atgctgttgc tctagacatt ggcacaccag 3300 acctgtatac tgtttcagtg attacatttc caatagagca ctcacatgtc tcatatccat 3360 tatctgccat cccaaacttg tctgtagtca aggagtctaa atttaagtta taatagcatt 3420 tttcaacaca taagttgggt tgtttaagtg caatacttga tggtatatag gatataagaa 3480 tagatgccaa gatcattttt gttataagaa ctaagaagtt ggtgcttaat tttgtattta 3540 ttatgaactg aaattgctga atcaaagtta attttctcca ctcgacttta cttctgttga 3600 aaagatagca atcatcggtg tgggtttttg atgctctctc ttgattgcaa acacattttt 3660 ctgcgcagga atgagtcaag aatgatacgc aaccgcaaac tctacattta aatgggaaat 3720 atggccacaa ccagttgata gcccaaagaa tgggatatgt taagatcccg attatgtcgt 3780 accatatgct cagagcattt ttagttttcc aaatgagcca tgatataggg aaagctattg 3840 tcaaaaacac aaaaatccat ttaaaataag aaaaatttgc gcagaaaaaa atcttttttg 3900 gctcctctga gtatttggca acgcagttcc tcaccggtat atctactttg gcaatcaagc 3960 tagatttatc accacaaagg agaaaatgat ttccatctag ttcttctggt ttgaaattta 4020 ttgttgaatc acctgtgatg gatttgatgc tctcggattt aggatttttt acatttttta 4080 ttaagactcc aatattctct tctgatctca gtttgatttg ataaggagat gacatcgaca 4140 cttgatttat tttgcaatca ccagatagtc gtactgtgag tcgtgccaca gtaggggact 4200 ttaaattcac tttagggtca acgttgatag ggttgtttga cttgtctaca aaaaagaact 4260 ttgtcccaat ctctaaaact tttttgtttt ccaattttag cacaggaacc acaggaaagt 4320 ttttgaattt tgtctttcta aattctcttt catattggca tatatcaaat atattggaag 4380 agctacttat gcatgaaata atttcttctc cattatcaat ctgataatga gcattgaact 4440 cactcactcc ttttatcatg caatgcttct tctcaaaatt gtcacaattt aagctcggag 4500 taggagactg agttgtggtt tcaccatttc ttaaaatcct ggacaatttc ttctgcttaa 4560 gcttagttgt ttcagccgga atgtactcct cagtttcgat aaggtcttct ggatcatcta 4620 ctttgtatct atcttgaatc cttcttaact ggtcattatt gtctacctga ttcaacaggt 4680 agacctcaga cgcgagaaag agcaaatata gacttagaca gtagataggt agatagtatt 4740 tcttcatctt tatgaggtat ttcaaaagta tttaattgtt gcaccgattg ctct 4794 //