ID GU584184; SV 1; linear; genomic RNA; STD; VRL; 3401 BP. XX AC GU584184; XX DT 24-MAR-2010 (Rel. 104, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Watermelon bud necrosis virus strain JT segment S, complete sequence. XX KW . XX OS Watermelon bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3401 RX DOI; 10.1007/s00705-010-0881-z. RX PUBMED; 21184244. RA Li J.T., Yeh Y.C., Yeh S.D., Raja J.A., Rajagopalan P.A., Liu L.Y., RA Chen T.C.; RT "Complete genomic sequence of watermelon bud necrosis virus"; RL Arch. Virol. 156(2):359-362(2011). XX RN [2] RP 1-3401 RA Chen T.-C., Li J.-T., Yeh Y.-C.; RT ; RL Submitted (29-JAN-2010) to the INSDC. RL Biotechnology, Asia University, 500, Lioufeng Rd., Wufeng, Taichung 41354, RL Taiwan XX DR MD5; 245224f4a7fc28336d4457d006205884. DR EuropePMC; PMC3371012; 22715400. DR EuropePMC; PMC4326804; 25540203. XX FH Key Location/Qualifiers FH FT source 1..3401 FT /organism="Watermelon bud necrosis virus" FT /segment="S" FT /host="Citrullus lanatus (watermelon)" FT /strain="JT" FT /mol_type="genomic RNA" FT /country="India" FT /collection_date="30-May-2008" FT /db_xref="taxon:76052" FT CDS 67..1386 FT /codon_start=1 FT /product="nonstructural NSs protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:D4P8F9" FT /protein_id="ADD83165.1" FT /translation="MSNEKSVASEFIKSYGTRDNRAVNDCYSVFSGEGVNFLNLFMHNN FT AGIKSAFSINDLGRNEDIKIHEAEVIDSCHDYHYFEKFGLDITFCEHEMGLVVRKPGVK FT NTGCKFTMHNQIFNPNSDVLDLAPGTTSEDIFYEKSKIRPIGMTPSGWCLDECRRNNFY FT IAANGELALDYGFSVMGKTTSYWRENMSREKILSVKQKSLPDNTVPTNRLLSTSTVKGI FT QLGSELASDNTVILSLKQNLNIDLKSQYRISFHGIQEEGAFARTFCVPFENKSRMICMY FT AKTVVDNSNERTTLIIKVVTKTVDSRLVIPIRNHANCTRKIGARIGLVDFCDTDPNYNQ FT MIVKELLSVHTQFAIKLSEVVGKPIIVFKMYDKELSNNHVDVFGRILNYQTDTEGNIYF FT LSKTLEVLPKSLSTLSYLGSIAPIQWIECLEHQHFVVIAN" FT CDS complement(2507..3334) FT /codon_start=1 FT /product="nucleocapsid protein" FT /db_xref="GOA:D4P8G0" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:D4P8G0" FT /protein_id="ADD83166.1" FT /translation="MSTVKQLTDKKIKDLLAGGAADVEIETEDATPGFSFKSFYDNNKD FT VEITFTTCLNILKCRKQIFTACKNGKYNFCGKNIVATTAQVGPDDWTFKRTEAFIRTKM FT VSMVEKSTNENAKQEMYTKIMELPLVAAYGLNVPAAYDSCALRMMLCIGGPLPLLSSLT FT GLAPVIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKGEMDKMFKSAVEL FT LSKSNPGTASSISLKKYDDQVKYMDRIFNSSLSMDDYGEHSKKSSKASSSLEV" XX SQ Sequence 3401 BP; 1102 A; 583 C; 586 G; 1130 T; 0 other; agagcaatcg aagcatctaa taattctaga aaaacagcga taaattcaag aaatactatt 60 tcaggcatgt ctaacgaaaa gagtgttgct tctgagttta tcaaaagtta tggcacgaga 120 gacaacagag cagttaatga ttgctattct gttttctctg gagaaggtgt caactttctc 180 aatttgttca tgcataacaa tgcaggtatc aaatctgcgt tcagcatcaa cgatttgggc 240 aggaatgagg atatcaaaat ccatgaagct gaagttattg attcatgcca tgattatcat 300 tactttgaaa aatttggtct agacattact ttttgcgagc atgaaatggg tctggtcgtg 360 agaaagcctg gtgtgaaaaa cacaggctgc aaattcacaa tgcacaacca aatcttcaac 420 cctaactctg acgttttaga tctggcacct ggaacaactt cagaagacat cttttatgaa 480 aaaagtaaga taagacccat tggaatgacc ccttctggct ggtgtttaga tgaatgccgg 540 aggaataact tttacatagc tgctaatgga gaactggctc ttgattatgg tttttctgtc 600 atgggcaaaa caacatctta ttggagagag aacatgtcaa gagagaagat tttgtcggtg 660 aagcagaaat ctcttcccga caacactgtt ccaacaaata gattgctgtc tacttcaaca 720 gttaaaggaa tccaactggg ttcggaactg gcatctgata acacagtcat attgtcattg 780 aagcaaaatc tgaacattga cttgaaatca cagtaccgga tttcattcca tgggatccaa 840 gaagaaggag cctttgcaag gactttctgt gttccttttg aaaacaaatc aaggatgatc 900 tgcatgtacg caaaaaccgt tgtggataac agcaatgaga gaaccacttt aataataaaa 960 gtggtaacaa aaactgttga ttctcgtctt gtcatcccca tcagaaatca tgccaactgc 1020 acgaggaaga ttggagccag gataggtctt gtcgatttct gtgatactga tcccaattat 1080 aatcaaatga ttgttaaaga attactatct gttcacactc agttcgctat taaattatct 1140 gaagtggttg ggaaacctat aatagtgttt aaaatgtatg ataaagagct gagcaataat 1200 catgtggatg tttttggaag gattttaaat taccagacag atacagaagg aaatatttat 1260 ttcctctcga aaacccttga agttcttcct aaatcacttt caactttaag ttatctgggg 1320 agtattgccc caattcaatg gatagaatgc ttagagcacc agcattttgt tgtgattgct 1380 aactgattta ctaaataacc tagttccagc agacgatttc tatcttaatg ttttataaat 1440 aattaagtcc ttccttatca aataatatta agttttaagt tcaatatatg tttgaatatt 1500 taaatgttta tcatagttta ctagattaaa gctagtatta ataagttgtg tagcatgaat 1560 atgtttaata tgagtgtaaa cctatgaaag ttaataaaga aaacccaaaa aaatcaaaaa 1620 acaaaaaacc aaaaaagacc tcgaaagggg caaacttggc ttttttattc caagtgatcc 1680 taacctggtt ttaataacct tgtttatttg agctgctggc ttgaagtgtt acgggtgcaa 1740 cgtgctgttc gagcttattc aagattaaca aaggaaagtt ctgtccccat gtttattagc 1800 taaagcaaac tgacagacac aaccactaga tggttcagta aaattagata tagcagatcg 1860 atttatacag atctaaattg ttattcattt tacattacac ctaatattct gatcataact 1920 tatgcatatc cttaaagttc taattaaaat gttcaaaatg ccaacttttg ttcaaatttg 1980 agtctttcaa actggtttct aagaatataa tcagctttaa gctactggat acatagaagt 2040 ttggttattt tacatagctg gtgctaatgt ctggtataca atatctgtaa atagtggcca 2100 ttatttgccc caaaagaggc tttttttgga tttttttggt tttttgattt tttggttttt 2160 atttgttttt tgattttttt ggatttttga attttgattt tatttatcct gtttatgtaa 2220 aatattctat ttatatattt atctttaaaa cacacattag cacaccgaca tagcaaatag 2280 cttacatatt aaattcagtt taatattagt ggaaacacac aaataaacta atagtacaca 2340 caaacttttt aaataagact tttaatagtt aataatatgt ttaacttaat attaatgtaa 2400 acacatgaat aaactaatga tacacacaaa cagttttaaa ttatctgttt aatagtaggt 2460 aaatacattc atacataaat atttatatgc aacttggtgt tttaagtcac acttccaaag 2520 aagagctagc ctttgagctc ttcttagagt gctcaccata gtcatccatg gaaagactag 2580 aattgaagat cctgtccatg tatttaacct ggtcatcata tttcttcaga gagattgaac 2640 tggctgttcc tgggttactc ttgctgagca actcaacagc tgatttgaac atcttatcca 2700 tttctccctt gaactcaatt tgtgaggcag aaagaacttt agctactttg cacacctgtt 2760 cataagtaga aaagtttttt atgcctagct tctctttttt cacattttga taataagcta 2820 aaggaaatat gactggtgct agccctgtca aactagatag gagaggtaaa ggacctccaa 2880 tacataacat cattcttaga gcacatgaat cataagctgc aggaacattc aagccatagg 2940 ctgccaccaa tggcagttcc attatttttg tatacatctc ttgtttggcg ttttcattag 3000 tacttttctc caccatacta accatctttg ttctgatgaa agcttctgtc cttttaaaag 3060 tccaatcgtc agggcctact tgagcagttg ttgcaacgat atttttccca cagaaattat 3120 atttcccatt cttgcaagca gtaaagatct gctttctgca ctttaagata ttcaagcagg 3180 ttgtaaaagt tatttcaaca tccttattat tgtcgtagaa agatttaaaa ctgaatccag 3240 gtgttgcatc ctcggtttca atttcaacat cagcggcacc accagccaac aagtctttga 3300 ttttcttgtc ggtaagttgc ttaacggtag acatggtgtt tactatggaa acgtctaatt 3360 gattgacttt aaacggattt tattaatgct tcgattgctc t 3401 //