ID GU584131; SV 1; linear; genomic RNA; STD; VRL; 3234 BP. XX AC GU584131; XX DT 03-FEB-2011 (Rel. 107, Created) DT 03-FEB-2011 (Rel. 107, Last updated, Version 2) XX DE Brome mosaic virus strain BMV-CZ segment RNA1, complete sequence. XX KW . XX OS Brome mosaic virus OC Viruses; Riboviria; Bromoviridae; Bromovirus. XX RN [1] RP 1-3234 RA Gadiou S., Kundu J.K.; RT "Complete genome sequence of a Brome mosaic virus isolate from the Czech RT Republic"; RL Czech J Genet Plant Breed 46(4):178-182(2010). XX RN [2] RP 1-3234 RA Gadiou S., Vacke J., Kundu J.K.; RT ; RL Submitted (29-JAN-2010) to the INSDC. RL Department of Virology, Crop Research Institute, Drnovska 507, Prague 6 RL 16106, Czech Republic XX DR MD5; ed9eefcc41af53915600b7e5a25ca55b. DR RFAM; RF01084; TLS-PK3. XX CC Genbank Accession Numbers GU584129-GU584121 represent the complete CC genome of Brome mosaic virus strain BMV-CZ. XX FH Key Location/Qualifiers FH FT source 1..3234 FT /organism="Brome mosaic virus" FT /segment="RNA1" FT /host="Agropyron repens" FT /lab_host="Hordeum vulgare" FT /strain="BMV-CZ" FT /mol_type="genomic RNA" FT /country="Czech Republic" FT /note="originally isolated in 1968" FT /db_xref="taxon:12302" FT 5'UTR 1..74 FT CDS 75..2960 FT /codon_start=1 FT /product="replication protein 1a" FT /db_xref="GOA:E9KIL4" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E9KIL4" FT /protein_id="ADW09019.1" FT /translation="MSSSIDLLKLIAEKGADSQSAQDIVDNQVAQQLSAQIEYAKRSKK FT INVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHFDCLDSFPPEDPV FT IDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQESDDFDEVPNFCLN FT RAQDCDVQADWAICIHGGYDMGFQGLCDAMHSHGVRVLRGTVMFDGAMLFDREGFLPLL FT KCHWQRDGSGTDEVIKFDFENESTLSYIHGWQDLGSFFTESVHCIDGTTYLLEREMLKC FT NIMTYKIIATNLRCPRETLRHCVWFEDISKYVGVSIPEDWSLNRWKCVRVAKTTVREVE FT EIAFRCFKENKEWTENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLN FT LYQKYEKLTALRDGMEWKGWCHHFKTRFWWGGDSSRAKVGWLRTLASRFPLLRLDSYAD FT SFKFLTRLSNVEEFEQDSVPISRLRTFWTEEDLFDRLEHEVQTAKTKRSKKKAKVPPAA FT EMPQEEFHDAPESSSPESVSDDVKPVTDVVPGAEVSVAVPTDPRGISRHGAMKEFVRYC FT KRLHNNSESNLRHLWDISGGRGSEIANKSIFETYHRIDDMVNVHLANGNWLYPKKYDYT FT VGYNEHSLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGVAGCGKTTA FT IKDAFRMGEDLIVTANRKSAEDVRMALFPDTFNSKVALDVVRTADSAIMHGVPSCYRLL FT VDEAGLLHYGQLLVVAALSKCSQVLAFGDTEQISFKSRDAGFKLLHGNLQYDRRDVVHK FT TYRCPQDVIAAVNLLKRKCGNRDTKYQSWTSESKVSRSLTKRRITSGLQVTIDPNRTYL FT TMTQADKAALQTRAKDFPVSKDWIDGHIKTVHEAQGISVDNVTLVRLKSTKCDLFKHEE FT YCLVALTRHKKSFEYCFNGELAGDLIFNCVK" FT 3'UTR 2961..3234 XX SQ Sequence 3234 BP; 829 A; 675 C; 841 G; 889 T; 0 other; gtagaccacg gaacgaggtc caatcccttg tcgaccacgg ttctcccact tgttctttgt 60 ttttcaccaa caaaatgtca agttctatcg atttgctgaa gttgattgct gagaagggtg 120 ctgacagcca gagtgcccaa gacatcgtag acaatcaggt tgcgcaacag ttatctgcgc 180 agattgaata cgcgaaaagg tctaagaaaa tcaacgttcg caataagctc tctattgagg 240 aggctgacgc cttccgtgac cgttatggtg gtgcttttga cttaaatttg actcagcagt 300 atcacgcgcc ccatagtctg gctggtgctc tgcgtgtagc ggagcatttc gactgtctcg 360 acagttttcc ccctgaagac cccgttatag atttcggagg gtcttggtgg catcactttt 420 caagaaggga taaaagggtg cacagttgtt gtcctgtgtt gggtgttaga gacgctgccc 480 gacatgagga aaggatgtgc cgcatgcgaa aaattttgca agaaagcgat gatttcgatg 540 aagtcccgaa cttctgtctt aaccgagctc aagattgtga tgtccaagct gattgggcta 600 tctgtatcca tggcggttat gatatgggct tccaaggtct gtgtgacgcc atgcattcgc 660 atggagtacg cgtactacgt ggtaccgtta tgttcgacgg tgctatgttg tttgaccgtg 720 agggttttct tcccttactt aaatgtcact ggcaacgtga cgggtcaggc acagatgagg 780 tgattaaatt cgattttgaa aatgaaagca cattatctta catccacgga tggcaagatt 840 tgggctcttt tttcaccgag tcggtgcatt gcatcgatgg aaccacctat ctgttggagc 900 gcgagatgct gaaatgtaac atcatgacct ataagatcat cgctacaaat ttacgctgcc 960 cccgggagac actacgtcac tgtgtatggt ttgaagacat atctaagtac gtaggagtct 1020 caatacctga agactggagt ctcaatcgct ggaaatgtgt gcgcgtcgcc aaaaccacag 1080 tgagagaggt agaggagata gctttcagat gtttcaaaga aaataaagaa tggactgaga 1140 acatgaaagc tgtcgcatct atcttatctg ccaagtcgtc gactgttatt attaacggtc 1200 aggctattat ggctggtgag cgtttagaca ttgaagatta tcatctagtg gcctttgctt 1260 tgaccctgaa tttgtatcag aagtacgaaa agcttacggc cctccgcgat gggatggaat 1320 ggaaaggttg gtgccatcac ttcaaaacta ggttttggtg gggtggagat tcatccaggg 1380 cgaaagtagg atggctgagg acattagcta gcagatttcc cctactacgt ctggattctt 1440 atgcggacag tttcaagttt ctgactcgtc tctcaaacgt tgaagaattt gagcaagatt 1500 ctgtaccaat atcacgtttg agaacgtttt ggactgaaga ggacttattc gaccggctgg 1560 agcatgaagt gcagacagcc aagaccaaac gctcgaagaa gaaggcgaaa gtcccgccag 1620 ctgctgagat gcctcaggag gagtttcacg atgcccctga gagttcgagc cctgagtccg 1680 tcagtgatga cgttaaaccg gtgactgatg tggtcccggg tgccgaggtg tctgttgcgg 1740 taccaacgga ccctcgtggc atatctagac acggagccat gaaggaattt gtgcgttatt 1800 gtaagagatt acataacaac tccgagtcta atcttcgtca cctatgggac atttccggcg 1860 gtcgcggaag tgagatcgca aataagagca tctttgagac ctaccatcgc atagacgata 1920 tggtgaatgt ccatttggcc aacggtaatt ggttgtatcc taaaaaatac gattacactg 1980 ttggatataa tgagcatagt ttaggtccga agcacgcaga tgaaacgtac attgttgata 2040 aaacatgtgc atgctctaac ttgagggaca ttgcagaagc tagcgccaaa gtttctgtcc 2100 ctacatgcga tatttccatg gttgatggag ttgcgggatg cggtaaaacc actgccataa 2160 aagatgcatt ccgtatggga gaggacctaa ttgtgacggc gaatcgtaaa tcggccgagg 2220 acgtcaggat ggctttattc cctgacactt ttaattccaa ggtagctttg gacgttgtgc 2280 gcaccgcgga ttctgcgatc atgcacggtg taccgtcctg ttataggttg cttgttgatg 2340 aggctggttt actgcattat ggtcaactcc tggtggtggc tgctctgtct aaatgttcac 2400 aagttcttgc ctttggggac acagagcaga tttcgttcaa gtctcgtgac gcgggtttta 2460 aattgctcca cggtaatctg caatatgatc gccgtgacgt tgttcacaag acttaccggt 2520 gtccgcaaga tgttatcgct gctgttaatc tgttgaagcg taaatgcggt aatagggaca 2580 cgaagtatca atcctggaca tctgagtcca aagtttctag aagtctcacg aagcgtcgta 2640 ttacttctgg tttgcaggtc actattgatc cgaacagaac gtatcttacg atgactcaag 2700 ctgataaagc ggcccttcaa acaagggcta aggattttcc cgtgagcaag gactggattg 2760 atggacacat aaaaacagta cacgaagcgc aagggatctc tgtcgacaat gtcactttgg 2820 ttcggcttaa gtcgaccaaa tgtgatttgt ttaaacatga ggagtattgt ttggttgcct 2880 taacacgaca caagaagtcc ttcgagtatt gctttaacgg cgagctcgct ggtgatttga 2940 tttttaattg tgttaagtag tgcgcttgtc tctgtgtgag acctctgctc gaggagagcc 3000 ctgttccagg taggaacgtt gtggtctaac ttaagactag ctgaatcggt gctataaccg 3060 atagtcgtgg ttgacacgca gacctcttac aagagtgtct aggcgccttt gagagttact 3120 ctttgctctc ttcggaagaa cccttagggg ttcgtgcatg ggcttgcata gcaagtctta 3180 gaatgcgggt gccgtacagt gttgaaaaac actgtaaatc tctaaaagag acca 3234 //