ID GU584130; SV 1; linear; genomic RNA; STD; VRL; 2866 BP. XX AC GU584130; XX DT 03-FEB-2011 (Rel. 107, Created) DT 03-FEB-2011 (Rel. 107, Last updated, Version 2) XX DE Brome mosaic virus strain BMV-CZ segment RNA2, complete sequence. XX KW . XX OS Brome mosaic virus OC Viruses; Riboviria; Bromoviridae; Bromovirus. XX RN [1] RP 1-2866 RA Gadiou S., Kundu J.K.; RT "Complete genome sequence of a Brome mosaic virus isolate from the Czech RT Republic"; RL Czech J Genet Plant Breed 46(4):178-182(2010). XX RN [2] RP 1-2866 RA Gadiou S., Vacke J., Kundu J.K.; RT ; RL Submitted (29-JAN-2010) to the INSDC. RL Department of Virology, Crop Research Institute, Drnovska 507, Prague 6 RL 16106, Czech Republic XX DR MD5; f49529726c6cb7e5147b1d788908294a. DR RFAM; RF01084; TLS-PK3. DR RFAM; RF01113; BMV3_UPD-PK3. XX CC Genbank Accession Numbers GU584129-GU584121 represent the complete CC genome of Brome mosaic virus strain BMV-CZ. XX FH Key Location/Qualifiers FH FT source 1..2866 FT /organism="Brome mosaic virus" FT /segment="RNA2" FT /host="Agropyron repens" FT /lab_host="Hordeum vulgare" FT /strain="BMV-CZ" FT /mol_type="genomic RNA" FT /country="Czech Republic" FT /note="originally isolated in 1968" FT /db_xref="taxon:12302" FT 5'UTR 1..103 FT CDS 104..2572 FT /codon_start=1 FT /product="polymerase 2a" FT /db_xref="GOA:E9KIL3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR007610" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:E9KIL3" FT /protein_id="ADW09018.1" FT /translation="MSSKTWDDDFVRQVPSFQWIIDQSLEDEVEAASLQVQEPADGVAI FT DGSLASFKLAIAPLEIGGVFDPPFDRVRWGSICDTVQQMVQQFTDRPLIPQAEMARMLY FT LDIPGSFVLEDEIDDWYPEDTSDGYGVSFAADEDHASDLKLASDSSNCEIEEVRVTGDT FT PKELTLGDRYMGIDEEFQTTNTDYDITLQIMNPIERRVSRVIDTHCHPDNPDISTGPIY FT MERVSLARTEATSHSILPTHAYFDDSYHQALVENGDYSMDFDRIRLKQSDVDWYKDPDR FT YFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPEMGDAINMKDTAKAIAKRFRSTFLNV FT DGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNVAAETDLCRYQHMLKSDVKPVVTDTL FT HLERAVAATITFHSKGVTSNFSPFFTACFEKLSLALKSRFIVPIGKISSLELKNVRLNN FT RYFLEADLSKFDKSQGELHLEFQREILLALGFPAPLTNWWSDFHRDSYLSDPHAKVGMS FT VSFQRRTGDAFTYFGNTLVTMAMIAYASDLSDCDCAIFSGDDSLIISKVKPVLDTDMFT FT SLFNMEIKVMDPSVPYVCSKFLVETEMGNLVSIPDPLREIQRLARRKILRDEQMLRAHF FT VSFCDRMKFINQLDEKMITMLCHFVYLKYGKEKPWIFEEVRAALAAFSLYSENFLRFSD FT CYCTEGIRVYQMSDPVCKFKRTTEERKTDGDWFHNWKNPKFPGVLDKVYRTLGIYSSDC FT STKELPVKRIGRSHEALERESLKLANDRRTTQRLKKKVDDYATGRGGLTSVDALLVKSH FT CETFKPSDLR" FT 3'UTR 2573..2866 XX SQ Sequence 2866 BP; 772 A; 601 C; 678 G; 815 T; 0 other; gtaaaccacg gaacgaggtt caatcccttg tcgacccacg gtttgtccaa cacacatcta 60 accttgttgt tgttgtgttt tgtttctttc tactatcacc aagatgtctt caaaaacctg 120 ggatgatgat ttcgttcgcc aggtcccgtc tttccaatgg atcatagatc aatccttaga 180 agacgaggtg gaggctgcta gccttcaggt gcaggagccg gcagacggag ttgccattga 240 cggatctctc gcgagtttta aattagctat agcgcccttg gagataggag gggtattcga 300 tccccctttt gaccgagtgc gctggggctc tatttgcgat accgtccagc aaatggttca 360 acagttcacc gatagaccac tgattcctca ggctgaaatg gcacgaatgt tatatcttga 420 cattccgggc tctttcgtgc ttgaagatga aatcgatgac tggtatcctg aggatactag 480 tgatggttac ggtgtatcgt ttgccgctga tgaagatcat gcgagcgatc taaaactcgc 540 cagtgattcc tcgaactgtg aaattgagga agttcgtgtt actggagata cccccaagga 600 gctgaccctt ggagataggt acatgggcat tgacgaagag tttcagacta ctaatactga 660 ttacgacatc actcttcaga tcatgaaccc tattgaacgt agggtttcgc gcgttattga 720 tacgcactgc catccagata accctgacat ctccactggg ccaatttata tggagagagt 780 cagccttgct agaacagaag caaccagtca ttccatactg ccaacccatg cttatttcga 840 tgattcgtac catcaagccc ttgttgaaaa tggtgattat tccatggact ttgataggat 900 cagacttaag caaagtgacg tagactggta taaggacccc gatagatatt ttcaaccaaa 960 aatgaatatc gggagtgctc agcgaagagt tggtactcag aaagaagtct taaccgcact 1020 taaaaagcga aacgcggatg ttccagaaat gggagacgcg attaacatga aggacactgc 1080 gaaggctata gcaaagcgct ttcgtagcac attcctgaat gttgacggtg aagactgtct 1140 gagagcttct atggatgtca tgactaaatg tcttgagtac cataagaagt ggggtaagca 1200 catggacttg caaggtgtga atgtggcagc agagactgat ttatgtcggt accagcatat 1260 gctgaagtct gacgtaaaac ctgttgtaac tgacaccctt cacttggaac gagcggtagc 1320 agctactata acatttcata gtaaaggtgt gactagtaat ttttcaccct ttttcactgc 1380 ttgtttcgag aagttatcac tggccctgaa atccaggttc attgtgccta tcggaaagat 1440 atcctctctg gagcttaaga atgtccgctt gaataacaga tattttcttg aagcggacct 1500 aagcaaattt gataaatctc agggtgagct gcacctagag tttcagagag agatactcct 1560 tgcgctgggc tttccagcgc cgctgacgaa ttggtggtct gattttcatc gcgattctta 1620 tttatcagac cctcatgcca aggtgggaat gtccgtttcc ttccaacgca gaactggtga 1680 cgcgtttaca tatttcggta atactcttgt cactatggct atgattgcat atgcctctga 1740 tctaagtgac tgtgactgtg caatattttc aggagatgat tctttaatca tctctaaagt 1800 taaaccagtc ctggataccg atatgttcac gtctctcttc aatatggaga taaaagtcat 1860 ggaccctagt gtgccctacg tttgtagtaa gtttcttgtt gaaactgaaa tgggcaattt 1920 ggtgtctata ccagatcctc tgagagagat ccagcgctta gctaggcgaa agattctgcg 1980 tgatgaacag atgctcagag cacatttcgt ttccttctgt gatcgaatga agtttatcaa 2040 tcaacttgat gagaagatga ttacgatgct ctgtcatttt gtttatctga aatatgggaa 2100 agaaaaacct tggattttcg aggaggttag agctgctctt gcagcttttt ccttatattc 2160 cgagaatttc ctgaggttct ctgattgcta ctgtaccgaa ggcatcagag tttatcagat 2220 gagcgatcct gtatgtaagt tcaaacgcac cacggaagag cgtaaaactg atggtgactg 2280 gtttcacaac tggaagaatc caaagtttcc tggtgtgtta gacaaagtct acagaaccct 2340 tgggatttat tcctcggact gtagtactaa ggagctccct gtcaaacgga tcggacgttc 2400 acatgaggcc cttgagcgtg agtcactcaa attagctaat gatcgtagga ccacacaacg 2460 cttgaaaaag aaggtcgacg attacgctac cggtagagga ggcctaacgt cagttgatgc 2520 tttgctcgtg aagtcccatt gtgagacttt taagccctct gatctgagat gatcggttct 2580 atttatatat gaacctaagc tgtgaacagc cctttggtta aggtaaaaaa ctcctggtcg 2640 ggcagaccac tttggctaag tttaaaagct tgttgaatca gtacaataac tgatagtcgt 2700 ggttgacacg cagacctctt acaagagtgt ctaggtgcct ttgagagtta ctctttgctc 2760 tcttcggaag aacccttagg ggttcgtgca tgggcttgca tagcaagtct tagaatgcgg 2820 gtgccgtaca gtgttgaaaa acactgtaaa tctctaaaag agacca 2866 //