ID   GU584129; SV 1; linear; genomic RNA; STD; VRL; 2108 BP.
XX
AC   GU584129;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   03-FEB-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Brome mosaic virus strain BMV-CZ segment RNA3, complete sequence.
XX
KW   .
XX
OS   Brome mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Bromovirus.
XX
RN   [1]
RP   1-2108
RA   Gadiou S., Kundu J.K.;
RT   "Complete genome sequence of a Brome mosaic virus isolate from the Czech
RT   Republic";
RL   Czech J Genet Plant Breed 46(4):178-182(2010).
XX
RN   [2]
RP   1-2108
RA   Gadiou S., Vacke J., Kundu J.K.;
RT   ;
RL   Submitted (29-JAN-2010) to the INSDC.
RL   Department of Virology, Crop Research Institute, Drnovska 507, Prague 6
RL   16106, Czech Republic
XX
DR   MD5; 40f7bb417831300c0dde5c1bc929692b.
DR   RFAM; RF01084; TLS-PK3.
DR   RFAM; RF01108; BMV3_UPD-PK1.
XX
CC   Genbank Accession Numbers GU584129-GU584121 represent the complete
CC   genome of Brome mosaic virus strain BMV-CZ.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2108
FT                   /organism="Brome mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Agropyron repens"
FT                   /lab_host="Hordeum vulgare"
FT                   /strain="BMV-CZ"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /note="originally isolated in 1968"
FT                   /db_xref="taxon:12302"
FT   5'UTR           1..91
FT   CDS             92..1003
FT                   /codon_start=1
FT                   /product="movement protein 3a"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:E9KIL1"
FT                   /protein_id="ADW09016.1"
FT                   /translation="MSNIVSPFSGSSRTTSDVGKQAGGTSDEKLIESLFSEKAVKEIAA
FT                   ECKLGCYNYLKPNEPRNYIDLVPKSHVSAWLSWATPKYDKGELPSRGFMNVPRVVCFLV
FT                   RTTDSAESGSITVSLCDSGKAARAGVLEAIDNQEATIQLSALPALIALTPSYDCPMEVI
FT                   GGDSGRNRCFGIATQLSGVVGTTGSVAVTHAYWQANFKAKPNNYKLHGPATIMVMPFDR
FT                   LRRLDKKSLKNYIRGISNQSVDHGYLLGRPLQSVDQVAQEDLLVEESESPSAPDRGVKD
FT                   SKSVSASSVAGLPVSSPTLRIK"
FT   CDS             1242..1811
FT                   /codon_start=1
FT                   /product="coat protein 3b"
FT                   /db_xref="GOA:E9KIL2"
FT                   /db_xref="InterPro:IPR002009"
FT                   /db_xref="UniProtKB/TrEMBL:E9KIL2"
FT                   /protein_id="ADW09017.1"
FT                   /translation="MSTSGTGKMTRAQRRAAARRNPRAVKVQPVIVEPLAAGQGKAIKA
FT                   IAGYSISKWEASSDAITAKATNAMSITLPHELSSEKNKELKVGRVLLWLGLLPSVAGRI
FT                   KACVAEKQAQAEAAFQVALVVADSSKEVVAAMYTDAFRGATLGDLLNLQIYLYASEAVP
FT                   AKAVVVHLEVEHVRPTFDDFFTPVYR"
FT   3'UTR           1812..2108
XX
SQ   Sequence 2108 BP; 517 A; 469 C; 544 G; 578 T; 0 other;
     gtaaaatacc aactaattct cgttcgattc cggcgaacat tttattttac caacatcggt        60
     tttttcagta gtgatactgt ttttgttccc gatgtctaac atagtttctc ccttcagtgg       120
     ttcctcacga actacgtctg acgttggcaa gcaagcggga ggtactagcg acgagaagct       180
     cattgagtcg ctgttctctg aaaaggctgt gaaagagata gctgccgagt gtaaactcgg       240
     atgttataac tatctgaagc ctaatgaacc ccgcaactat atagacctgg tgccaaagtc       300
     acacgtatct gcttggctct catgggctac acccaagtat gataaaggag agttaccttc       360
     caggggattc atgaacgttc cacgcgtcgt ttgttttctc gttcgtacca cagatagcgc       420
     agaatccggt tctataaccg tgagcctgtg cgattctggt aaggctgctc gtgctggagt       480
     actcgaagcg attgataatc aggaggctac aattcaattg tcggctttac ctgctttgat       540
     agctttgacg cctagctatg attgtccgat ggaagtcatc ggcggtgata gcggtaggaa       600
     tcgatgtttt gggatagcaa cccaacttag cggtgtggta gggacaacag gttccgttgc       660
     agttactcat gcgtattggc aagctaattt taaagcgaag cccaacaact ataagttgca       720
     tggtcccgct acaattatgg tgatgccatt tgacagactg agacgtctcg ataagaaaag       780
     cctcaaaaat tacatcagag gtatttctaa ccagtctgtg gatcatgggt atcttctcgg       840
     aagaccgtta caatctgttg atcaggttgc ccaggaagat ttgttagttg aggaatccga       900
     gtctccttcc gctcccgaca gaggtgtgaa ggatagtaag tctgtatccg cgtcatctgt       960
     cgctggactt cctgtgtcca gtcctacgct tagaattaaa taggtaaatc cggtctaaca      1020
     agctcggtcc atttcttaga gttaagcaag ctggggagac ccccgacagc cgtttggatc      1080
     agcgctcgcg tctcgtttgg gttcaattcc cttaccttac aacggcgtgt tgagataggt      1140
     cctcggggga ggttatccat gtttgtggat attctatgtt atgtgtctga gttattaaaa      1200
     aaaaaaaaaa aagatctatg tcctaattca gcgtattaat aatgtcgact tcaggaactg      1260
     gtaagatgac tcgcgcgcag cgtcgtgctg ccgctcgtag aaatcctcgg gctgttaaag      1320
     tccaaccggt aattgtcgaa ccactcgctg ctggccaagg caaggccatt aaagcgattg      1380
     caggatacag catatcaaag tgggaggcgt cttcggacgc gattacagcg aaagccacca      1440
     atgccatgag tatcactctg ccccatgagc tctcttctga gaagaataag gagcttaagg      1500
     ttggtagggt gttgctttgg ttgggattgc ttcctagcgt tgctgggagg attaaggctt      1560
     gtgttgctga gaaacaggca caggccgagg ctgcttttca agtagccttg gtggttgctg      1620
     actcctcgaa agaggtggtc gcggccatgt atacggacgc ctttcgaggg gcgactctgg      1680
     gggatctgct taacctccag atttatctgt atgcatctga agcagtgcct gctaaggcgg      1740
     tcgttgtaca tctagaagtc gagcacgtaa ggcctacgtt cgatgacttc ttcaccccgg      1800
     tttataggta gtgcccctgc tcggagagcc cctgactggg ttaaagttac aggcccctcg      1860
     tctcaggctg agaccctgtc caggtaggac gctttggcta agattaaaag cttgttgaat      1920
     cggtacaata accgatagtc gtggttgaca cgcagacctc ttataagagt gtctaggtgc      1980
     ccttgagagt tactctttgc tctcttcgga agaacccctt ggggttcgtg catgggcttg      2040
     catagcaagt cttagaatgc gggtaccgta cagtgtgtaa aaacactgta aatctctaaa      2100
     agagacca                                                               2108
//