ID GU565151; SV 1; linear; genomic RNA; STD; VRL; 2587 BP. XX AC GU565151; XX DT 08-FEB-2010 (Rel. 103, Created) DT 08-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE Plum pox virus isolate SwC polyprotein gene, partial cds. XX KW . XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2587 RA Di Nicola E., Ilardi V.; RT "Silencing for wide range PPV resistance"; RL Unpublished. XX RN [2] RP 1-2587 RA Di Nicola E., Ilardi V.; RT ; RL Submitted (22-JAN-2010) to the INSDC. RL CRA-PAV, CRA, Via C.G. Bertero, 22, Rome, IT 00156, Italy XX DR MD5; 62b2d99418864c5bf89395a262ee0c02. XX FH Key Location/Qualifiers FH FT source 1..2587 FT /organism="Plum pox virus" FT /host="Prunus avium" FT /lab_host="Nicotiana benthamiana" FT /isolate="SwC" FT /serotype="C" FT /mol_type="genomic RNA" FT /country="Italy" FT /note="virus provided by D. Boscia" FT /db_xref="taxon:12211" FT 5'UTR 1..120 FT CDS 121..>2587 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D3KDU7" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:D3KDU7" FT /protein_id="ADC34678.1" FT /translation="MSTIVFGSFTCHLDAAIHQDNADRVAKAWARPENSQISNVHLLCR FT RTAKSLINTYESATASAWKGLEEKLQPMFAKREFSKTITKRKGLRCFKASSEQVIERKL FT KQQYKEERERFQWINGPENVVTHIEPVTEEAPTWVPFPDVPKRPLSKTPSMKRHIIFDK FT VRMSETTLQLFMRRVANNAKANGQKVEIIGTKHVVGNYIRKSQRTYFRTHVRHLDGLKP FT RYDITLDEATKKIVQIFANTSGFKHVHGKGEITPGMSGFVINPRNISDPMQIHDTDLFI FT VRGKHNSILVDARCPVSKEHSNELVHYSDPGKKFWVGFTNSFAQCKLRETDHQCTSDLD FT VQECGYVAALVCQAIIPCGKITCLQCAEKYAYMSQQEIRDRFSTVIEQHEKTVMDSYPQ FT FSHVLAFLKRYRELMRVENQNYEAFKDITHMIGERKEAPFSHINKINELIIKGGMMTVQ FT DYSEASDRLRELARYQKNRTENIQSGSIKAFRNKISAKAHVNMQLMCDNQLDTNGNFVW FT GQREYHAKRFFRNYFNVIDTSEGYRRHIVRENPRGTRKLAIGNLVMSTNLAALRKQLLG FT EECTRFEVSKECTSKRGANFVYQCCCVTHEDGTPLESEIISPTKNHLVIGNSGDSKYVD FT LPKTEGGGMYIAKAGYCYINIFLAMLVNVNEGEAKSFTKTVRDTLVPKLGTWPSMMDLA FT TACHFLAVLYPETRNAELPRILVDHESKIFHVVDSYGSLSTGMHILKANTVNQLISFAS FT DTLDSSMKMYLVGGLEVDRCDEFKNVKLLIRSIYRPELMQQVLTEEPYLLIMSVLSPGV FT LMALFNSGSL" FT mat_peptide 121..1047 FT /product="P1" FT mat_peptide 1048..2418 FT /product="helper component proteinase" FT mat_peptide 2419..>2587 FT /product="P3" XX SQ Sequence 2587 BP; 791 A; 545 C; 613 G; 638 T; 0 other; cgaaatttta tgcgatcaaa caaacttcaa gctttcaaaa acttgaatca tttgctaacc 60 aatctgcaaa gcacccgtac tctttgctcc aatctttttg cttacaaatc acactttacg 120 atgtcaacca ttgtatttgg ctcatttact tgtcatcttg acgcagcaat ccatcaggat 180 aatgcggaca gagtggcaaa ggcctgggct cgcccagaga acagccaaat cagtaatgtg 240 catctattgt gcaggaggac tgcaaaaagt ctcataaata catacgagag tgcaacagct 300 agcgcctgga aagggctaga ggagaaactt caaccaatgt ttgctaagcg agagtttagc 360 aaaacaatta cgaagcggaa agggcttcga tgtttcaagg caagttcgga gcaagtcatt 420 gagaggaaac tcaagcagca atataaggag gaacgcgagc ggttccaatg gatcaacggg 480 cccgagaatg tggtaaccca catcgagcca gttactgaag aggctccaac ttgggtacct 540 tttcctgatg tccccaagag acctctctct aaaacacctt caatgaagag gcacatcatc 600 tttgacaagg tcaggatgtc tgagaccact ctgcagttat tcatgcggag agtagccaac 660 aacgcaaagg cgaacgggca gaaggttgag ataataggca caaaacatgt agttggaaac 720 tacattcgga agagccagcg gacatatttc cgcacgcatg tgcggcatct agatggtctc 780 aagccacgct acgacattac tttggatgag gctacaaaga agattgttca gatcttcgcc 840 aatacaagtg gcttcaaaca tgttcatggc aagggcgaga taaccccagg gatgagcggt 900 tttgttataa atccacggaa catatcagat ccaatgcaga ttcacgacac tgatctgttc 960 atagtgcgtg gaaaacacaa ctcaatcctt gttgacgcac gatgcccggt ctctaaggag 1020 catagcaacg agttagtcca ctactcggac ccaggcaaga agttttgggt gggattcacg 1080 aattcatttg ctcaatgtaa attgcgtgag actgaccatc aatgcacgtc tgacttagat 1140 gtgcaagagt gtggatatgt tgcggcactt gtttgccagg ctatcattcc gtgtgggaag 1200 atcacatgcc tgcaatgcgc ggagaagtat gcatacatgt cacagcaaga gatccgtgat 1260 agattctcta cggtcattga gcaacatgag aaaacagtga tggatagcta cccgcaattt 1320 tcacatgtgc ttgcgttcct caagagatat cgtgaattaa tgcgggttga gaatcaaaat 1380 tatgaggcat tcaaagatat cactcacatg attggtgagc gtaaagaagc accattctcc 1440 cacattaaca aaattaatga attgatcatc aagggtggga tgatgactgt gcaagattac 1500 tcagaagctt cagatcgctt gcgagaactc gcacgttacc agaaaaatcg aacggagaac 1560 attcagagtg gctccataaa ggctttcaga aataaaatct ccgccaaagc acatgtcaac 1620 atgcaactca tgtgtgacaa ccagcttgat actaatggta attttgtgtg gggtcaaagg 1680 gagtatcatg ccaagcgctt ctttcggaac tatttcaatg tgatagacac aagtgagggg 1740 tacaggcgac acattgttcg tgagaaccca aggggaactc gtaagctggc aatagggaac 1800 ctcgttatgt ccactaacct ggctgcgttg cgcaagcaat tacttggtga ggagtgcact 1860 cgctttgaag tatccaaaga atgtacaagc aagcgaggtg cgaactttgt ctaccaatgt 1920 tgctgtgtta cacacgagga cggcacacca ttggaatctg agatcataag cccaacaaag 1980 aatcatttgg taattggcaa ttcaggggat tcaaagtacg ttgacttacc aaagacagaa 2040 gggggtggaa tgtatatcgc aaaggcaggc tattgctaca tcaacatctt tcttgcaatg 2100 ctcgttaatg ttaatgaagg tgaggcaaag agtttcacga agactgtgcg agacacactg 2160 gtacctaagc tcggaacatg gccatccatg atggatttag caacagcatg tcactttctt 2220 gcagtgctat atccggagac tcgaaacgct gaactcccaa ggatacttgt tgatcacgaa 2280 tcaaagatat ttcatgtcgt tgattcgtat ggttcattat cgacgggcat gcacatcctg 2340 aaagcaaaca cagtgaacca acttataagc tttgcaagtg atacgctaga ctcaagcatg 2400 aaaatgtatc tcgttggagg tctagaggtt gatcgatgcg atgaattcaa gaatgtgaaa 2460 ctcctcatcc ggagtattta tagaccagag ttaatgcaac aagtgctgac tgaagagcca 2520 tatttactga ttatgagcgt attgtcgcct ggtgttctga tggcattgtt taatagtggt 2580 tcactcg 2587 //