Dbfetch
ID GU564595; SV 1; circular; genomic DNA; STD; VRL; 2597 BP. XX AC GU564595; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Pepper golden mosaic virus isolate SLP1 segment DNA-B, complete sequence. XX KW . XX OS Pepper golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2597 RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K., RA Cardenas-Conejo Y., Arguello-Astorga G.R.; RT "Characterization of begomoviruses from San Luis Potosi, Mexico by a RT lineage-specific overlapping PCR method"; RL Unpublished. XX RN [2] RP 1-2597 RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K., RA Cardenas-Conejo Y., Arguello-Astorga G.R.; RT ; RL Submitted (24-JAN-2010) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, Camino a la Presa San Jose 2055, San Luis Potosi, SLP 78216, RL Mexico XX DR MD5; ff7b292a8fe026256eb5c3778909e1d7. XX FH Key Location/Qualifiers FH FT source 1..2597 FT /organism="Pepper golden mosaic virus" FT /segment="DNA-B" FT /host="Capsicum annuum" FT /isolate="SLP1" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="2009" FT /db_xref="taxon:223301" FT gene 401..1171 FT /gene="bv1" FT CDS 401..1171 FT /codon_start=1 FT /gene="bv1" FT /product="nuclear shuttle protein" FT /note="BV1; BR1; NSP" FT /db_xref="GOA:D5KJB2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D5KJB2" FT /protein_id="ADD92375.1" FT /translation="MYQSRYARVAPYVQRRFQRRNQVFKRTASGRRNDAKRRSSQLIKS FT NEDPKITSQRIHENQYGPEFVMSHNAAISTFINYPVLGKSQPNRSRSYIKLKRLSFKGT FT VKIERVHADVNMDGLCPKIEGVFSLVIVVDRKPHLSSSGALHTFDELFGARIHSHGNLA FT ITAALKDRYYVRHVLKRVLSVEKDTVMVDIEGCTSLSNKRFNCWSTFKDLEHDTCNGVY FT GNISKNAILVYYCWMSDVMSKASTFVSYDLDYVG" FT gene complement(1230..2099) FT /gene="bc1" FT CDS complement(1230..2099) FT /codon_start=1 FT /gene="bc1" FT /product="movement protein" FT /note="BC1; BL1; MP" FT /db_xref="GOA:D5KJB3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D5KJB3" FT /protein_id="ADD92376.1" FT /translation="MEAGLASAPSAFNYLESHRDEYQLSHDLTEIVLQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINASGSVIVEIHDQRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWRLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFSHNDVDFSHVDYGQWERKVLRSNSMTRVGLTGPIELRPGESWASRCTVGTSGPSRD FT SEMHPYRELQQLGPSVLDPGDSASQVGLQRAQSNITMSMAQLNELVRTTVHECISNNCN FT PAQPKSLQ" XX SQ Sequence 2597 BP; 739 A; 519 C; 594 G; 745 T; 0 other; actggatggc cgcgattttt ttggagtcct gccagcctgg accgcattat tttgggactc 60 cgggcacttt tcccaaggaa ttggcccact acatcccatt atccgggacc actacaactg 120 gaggctgttc ttttactgga gatcaatctg gaccgttggc gaaacctaat cgcgcacgtt 180 cgtttgaatt ttgatttatt ggcgcgatta ccaataaatg gaccatgtgt ataacagttt 240 tgatgttgac atatttgtaa ttgagcagta catggtccag taaaaactca agtgtggagt 300 tatgtaattt gaaatgataa tcgtgttgac tatttaatgg acttgagttt taatacatga 360 aatcgtcagg taaggattaa acatctacat tgtccctaat atgtatcagt caagatatgc 420 acgtgtggca ccatatgttc agagacgatt tcaacgacgt aatcaagtgt ttaagcgcac 480 agcatctggg agacgtaatg atgccaaacg tcgatcaagt caattaatta agagtaatga 540 ggatcctaag attacgtcgc aacgcataca tgagaaccaa tatgggcctg agttcgttat 600 gtcgcataat gccgcaattt ccacgttcat taattatcct gtacttggta agagtcaacc 660 caaccgaagt aggtcttaca ttaagcttaa acgtctgtcg ttcaagggaa cagtaaaaat 720 tgagcgtgtg catgcggatg tgaacatgga cgggttatgt cctaaaattg aaggggtgtt 780 ctccctggtt atcgtggtgg atcgtaaacc tcatttaagt tcgtctggcg cattgcatac 840 attcgacgaa ctatttgggg caagaatcca cagccatggg aacttagcca ttacagcagc 900 attgaaagat cgttattacg tccgtcatgt attgaagcgc gttctatcag ttgagaagga 960 cactgtcatg gtagacatcg aaggatgcac atccctttct aacaagcgct tcaactgctg 1020 gtctacattt aaggatttag aacatgacac atgtaacggt gtttatggca atataagcaa 1080 gaatgccata ttagtgtact actgctggat gtcggatgtc atgtctaaag catccacatt 1140 tgtatcatat gacctagact atgtaggttg attcataata aaataatgga agtgtttcac 1200 attttgaaca ttcaataaaa gagacatttt tattgcaaag acttcggctg tgccgggtta 1260 caattattgc taatacattc gtgaaccgta gtcctaacca gctcgttcaa ttgggccatt 1320 gacattgtta tattggattg ggctcgttgt agcccaacct gtgatgcgga atcacctggg 1380 tctaatacac ttgggcccaa ttgttgaagc tctctatacg ggtgcatctc cgaatccctt 1440 gaaggcccac ttgtacccac agtacaccta gaagcccatg actcacctgg cctcaattca 1500 attgggcctg ttagcccaac cctagtcatt gaattggacc gtaatacctt ccgctcccac 1560 tggccatagt ccacatggga gaagtccaca tcgttgtggg agaactgttt agatagtatt 1620 ttgacagtgg gagcccggaa tggtatatct accgagtgct tagctgtgga cagtttgagt 1680 ttgcctttga acttggcaaa atgagtcctt tgatgtacat ttgtatcgga cactcggtag 1740 tataatctcc atggaatggg gtccttcagt gaaaagaatg acgacgagaa gtaatggaga 1800 tctatgttgc accttattgg aaatgtccac gacgcctgta atgactcgtt atccgtcatt 1860 ctttggtcat gaatctccac aatgaccgac ccagaagcgt taataggaac ttgctgtcta 1920 tattctatga cgcagtggtc aatcttcata cagctgcgac ttagtcgtgc cgttagctgt 1980 gatgctgtgg aagggaactg aaggactatc tcagtcagat catgcgatag ctggtattca 2040 tctcgatgag attcaagata attaaaggcg ctaggagcac tcgccaaccc cgcttccata 2100 tctgaaaata tggctgcgca gcagaagtgt ttcgcgaata agaggatgtt gctatcaagt 2160 tcgatggtgt gtctacaggt ttacaaagac gaaacactta cgctggtcgt tgctgaagtt 2220 ctgccaaaga atatatgaat tgttaaagga agtctgcgtt agcagctgag taatatggga 2280 agctatggca acaaccaata aagctcaaag tgatatgaag aggatcagga attgcattta 2340 atgttgaaat gttcatcggc gcaattgcaa tgagaagccg tctcaacaag ccattatata 2400 gacttaacat atgagggtga gtttaagaat tgtgaactag ttgagaagaa tgtcaaatat 2460 gtaaataccg tataggactc caggagagtc cctcaacttc tgtcatatat tgtggagtcc 2520 tggagtccct tatatactag aactctctag gaagctaaga gctgaggtgt cctaatcgcg 2580 gccatccata taatatt 2597 //