ID GU564594; SV 1; circular; genomic DNA; STD; VRL; 2617 BP. XX AC GU564594; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Pepper golden mosaic virus isolate SLP1 segment DNA-A, complete sequence. XX KW . XX OS Pepper golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2617 RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K., RA Cardenas-Conejo Y., Arguello-Astorga G.R.; RT "Characterization of begomoviruses from San Luis Potosi, Mexico by a RT lineage-specific overlapping PCR method"; RL Unpublished. XX RN [2] RP 1-2617 RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K., RA Cardenas-Conejo Y., Arguello-Astorga G.R.; RT ; RL Submitted (24-JAN-2010) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, Camino a la Presa San Jose 2055, San Luis Potosi, SLP 78216, RL Mexico XX DR MD5; 9c29411a5b3cf71ce078743662469288. XX FH Key Location/Qualifiers FH FT source 1..2617 FT /organism="Pepper golden mosaic virus" FT /segment="DNA-A" FT /host="Capsicum annuum" FT /isolate="SLP1" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="2009" FT /db_xref="taxon:223301" FT gene 209..964 FT /gene="av1" FT CDS 209..964 FT /codon_start=1 FT /gene="av1" FT /product="capsid protein" FT /note="CP; AV1; AR1; coat protein" FT /db_xref="GOA:D5KJA8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D5KJA8" FT /protein_id="ADD92371.1" FT /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY FT RKPRIYRTYRSADVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSAYVLGKIWMDENIKLKNHTNSVMLWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV FT KNDLRDRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(961..1359) FT /gene="ac3" FT CDS complement(961..1359) FT /codon_start=1 FT /gene="ac3" FT /product="replication enhancer protein" FT /note="AC3; AL3; REn" FT /db_xref="GOA:D5KJA9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KJA9" FT /protein_id="ADD92372.1" FT /translation="MDSRTGESITVDQAENSVFIWEVPNPLFFRIHHVEDPLFTRTRIY FT HIEVRFNHNLRRALALQKAYLRFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGLNN FT VIRAVRFATDGYYVNYVLENHEIQFKLY" FT gene complement(1106..1495) FT /gene="ac2" FT CDS complement(1106..1495) FT /codon_start=1 FT /gene="ac2" FT /product="transcription activator" FT /note="AC2; AL2; TrAP; transactivator; suppresor of FT silencing" FT /db_xref="GOA:D5KJB0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KJB0" FT /protein_id="ADD92373.1" FT /translation="MLNSSSSTLPSIKAQHRIAKKRPIRRRRIDLNCGCSIFLHINCAN FT NGFTHRGEHHCGSGREFRFYLGGSKSPIFQDTPRGGPVVHQNQDIPHRSPVQPQLTPSI FT GSPKSIPPFPSLDDFDDSFWDDIFK" FT gene complement(1437..2486) FT /gene="ac1" FT CDS complement(1437..2486) FT /codon_start=1 FT /gene="ac1" FT /product="replication initiation protein" FT /note="AC1; AL1; Rep; rolling-circle replication initiator" FT /db_xref="GOA:D5KJB1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D5KJB1" FT /protein_id="ADD92374.1" FT /translation="MPLPPKSFRLQCKNIFLTYPQCDIPKDEALEMLRSLKWSVVKPMY FT IRVSREEHSDGFPHLHCLIQLSGKCNIKDARFFDITHPRRSAQFHPNVQAAKDANAVKN FT YITRDGDYCETGEYKVSGGSKANKDDVYYNAVNAASAVEALDIIKAGDPKTFIVSYHNI FT KANIERLFTTPPMPWTPPYPLSSFNNVPEDMQHWVAEYFGRSSAARPDRPISIVIEGDS FT RSGKTMWARALGPHNYLSGHLDFNAKVYSNDVEYNVIDDITPQYLKLKHWKELIGAQKD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENASLRAWTQKNAQFVILHAP FT LYKSTAQDS" XX SQ Sequence 2617 BP; 669 A; 568 C; 632 G; 748 T; 0 other; actggatggc cgcgattttt tggagtcttt tggggaccac tcagaataga gggctgagat 60 taactagata aagatatggg gccaccaatt attggatatt tgactgacca atcacatccc 120 gcctgtcaag tctaggtaat tgtgccttgg tgaccaaggt gtgggcctat aaatgcacgt 180 gcatctgcat ttatcgcttt aattcaaaat ggttaagcgg gatgccccat ggcgtttaat 240 ggcggggacc tctaaggttt cccgctctgc caattattca cgtggcacgg gtatgggccc 300 taaattcgat aaggccgctg cttgggttaa caggcccatg tacaggaagc ccaggatata 360 tcgtacctat agaagcgcag atgtgcctag aggttgtgaa gggccttgta aggtccagtc 420 cttcgagcag cggcatgata tctcacatgt tggcaaggtc atgtgcattt cggacgtgac 480 acgtggtaac ggcattactc atcgtgtggg caagcgtttc tgcgtcaagt ctgcatacgt 540 tttgggtaag atatggatgg acgagaatat caagctgaag aaccacacta acagcgtcat 600 gctctggctc gtgagagata ggagaccata tggtacccct atggattttg ggcaggtttt 660 caacatgtat gacaacgagc ccagtacagc cactgtgaag aacgatcttc gtgatcgtta 720 ccaagtcatg cacaggttct ccgcgaaagt aacaggtggc cagtatgcca gcaacgagca 780 ggcgttggtt aggcgctttt ggaaggtgaa caactacgtc gtgtacaacc accaggaagc 840 tggcaaatac gagaatcata cggagaacgc cctgttattg tatatggcat gtactcatgc 900 ctctaacccc gtgtatgcga cattgaaaat tcggatctat ttttatgatt cgataacaaa 960 ttaataaagt ttgaattgta tttcatgatt ctcaagtaca taatttacat agtaaccgtc 1020 cgtcgcaaaa cgcacagctc taattacatt gtttaagcct atggccccta gcctatgtaa 1080 atacaacatg acgcgaaatt tgaatctatt taaatatgtc gtcccagaag ctgtcatcga 1140 agtcgtccag acttggaaac ggaggtatgc tttttggaga gccaatgctc ggcgtaagtt 1200 gtggttgaac cggacttcga tgtggtatat cctggttctg gtgaacaacg ggtcctccac 1260 gtggtgtatc ctgaaaaata ggggatttgg aacctcccaa ataaaaacgg aattctctgc 1320 ctgatccaca gtgatgctct ccccggtgcg tgaatccatt attagcgcag ttgatgtgga 1380 ggaagataga gcagccgcag tttaggtcta tgcgtcgtct gcgaataggg cgctttttag 1440 ctatcctgtg ctgtgctttt atagagggga gcgtggagga tgacgaattg agcatttttt 1500 tgtgtccacg ctctcaatga tgcattttcc tctttgttga ggaaagctat atagctgcta 1560 ccttcccctg gattgcacag cacaattgat ggtatcccgc ctttaatttg aactggcttt 1620 ccgtatttac agttggactg ccagtctttt tgggccccaa taagctcttt ccagtgtttc 1680 agctttagat attggggcgt gatatcatca atgacgttat actccacatc gtttgaatag 1740 acctttgcat tgaaatcaag atgaccgctc aaataattat gtgggcctaa tgcacgtgcc 1800 cacattgtct tgccgcttcg cgaatcaccc tcaattacaa tactaatcgg tctatctggc 1860 cgcgcagcgg aactccgacc aaaatattca gcaacccaat gttgcatatc ctcaggaacg 1920 ttgttaaacg aggataatgg ataaggagga gtccatggca taggaggagt tgtaaatagg 1980 cgctcgatgt tagcctttat gttatgataa ctaacaatga acgttttcgg atcaccagct 2040 ttgattatgt cgagcgcctc caccgcactt gcagcattta ccgcgttata gtagacgtcg 2100 tctttatttg ctttggaacc cccggaaact ttgtactccc cagtttcaca atagtcacca 2160 tctctcgtga tgtaattctt tacggcattt gcgtctttag ctgcctgaac gtttggatga 2220 aactgggctg atctccgggg gtgtgtaatg tcgaagaacc gtgcatcttt gatgttgcac 2280 tttccactca actggattaa acagtgcaag tgcgggaacc catcggaatg ctcctcccgt 2340 gatacccgta tgtacatggg ttttaccact gaccatttta atgaacggag catttcgaga 2400 gcttcatcct ttgggatatc gcattgtgga tatgttaaga aaatgttttt acattgtaag 2460 cgaaatgatt ttggaggcag tggcattttt gcaaatatgg tgtaggactc cggtagagtc 2520 cctcaacttc tgtcatatat tgtggagtcc tggagtccct tatatacata aagcctcttg 2580 gggactccaa gggcaaaagc ggccatccta taatatt 2617 //