ID GU550512; SV 1; linear; genomic RNA; STD; VRL; 2587 BP. XX AC GU550512; XX DT 17-MAR-2010 (Rel. 104, Created) DT 17-MAR-2010 (Rel. 104, Last updated, Version 1) XX DE Plum pox virus isolate ISPaVe46 polyprotein gene, partial cds. XX KW . XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2587 RA Di Nicola E., Ilardi V.; RT "Silencing for wide range PPV resistance"; RL Unpublished. XX RN [2] RP 1-2587 RA Di Nicola E., Ilardi V.; RT ; RL Submitted (15-JAN-2010) to the INSDC. RL CRA-PAV, CRA, Via C.G. Bertero, 22, Rome, IT 00156, Italy XX DR MD5; e3cdb262c5bc6a68ce13bb76c16e8fdf. XX FH Key Location/Qualifiers FH FT source 1..2587 FT /organism="Plum pox virus" FT /host="Prunus domestica" FT /lab_host="Nicotiana benthamiana" FT /strain="D" FT /isolate="ISPaVe46" FT /serotype="D" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:12211" FT 5'UTR <1..120 FT CDS 121..>2587 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D4P076" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:D4P076" FT /protein_id="ADD69812.1" FT /translation="MSTIVFGSFTCHLDAAIHQDNADRLAKAWTRPENRQVSNVHLLCR FT RAAKSLINTYESATASAWKGLEEKLQPMFAKREFSKTVTKRKGLRCFKESSEKFIEKKL FT RKQYQEERERFQFLNGPDAIVNQISVDKCEASVWVPFPHIIEKPSFATPSMKKKVVFTK FT VRMSEASLQLFMRRVAANAKANSQKVEIIGRKRVVGNYTTKSRLTYFRTHVRHLDGSKP FT RYDLVLDEATKKILQLFANTSGFHHVHKKGEITPGMSGFVVNPMNLSDPMQVYDTDLFV FT VRGKHNSILVDSRCKVSKEQSNEIIHYSDPGKQFWDGFTNSFMQCKLRETDHQCTSDLD FT VKECGYVAALVCQAIIPCGKITCLQCAQKYSYMSQQEIRDRFSTVIEQHEKTVMDNYPQ FT FSHVLAFLKRYRELMRVENQNYEAFKDITHMIGERKEAPFSHLNKINELLIKGGMMSAQ FT DYIEASDHLRELARYQKNRTENIRSGSIKAFRNKISSKAHVNMQLMCDNQLDTNGNFVW FT GQREYHAKRFFRNYFDVIDVSEGYRRHIVRENPRGTRKLAIGNLVMSTNLAALRKQLLG FT EECIHFEVSKECTSKRGENFVYQCCCVTHEDGTPLESEIISPTKNHLVVGNSGDSKYVD FT LPTAKGGAMFIAKAGYCYINIFLAMLININEDEAKSFTKTVRDTLVPKLGTWPSMMDLA FT TACHFLAVLYPETRNAELPRILVDHEAKIFHVVDSFGSLSTGMHVLKANTINQLISFAS FT DTLDSDMKTYLVGGLEVDKCDEFKNVKLLIRSIYKPQIMEQVFKEEPYLLLMSVLSPGV FT LMALFNSGSL" FT mat_peptide 121..1047 FT /product="P1" FT /note="proteinase" FT mat_peptide 1048..2418 FT /product="helper component proteinase" FT /note="HC-Pro; silencing suppressor" FT mat_peptide 2419..>2587 FT /product="P3" XX SQ Sequence 2587 BP; 818 A; 522 C; 585 G; 662 T; 0 other; caaaatttta tgcgatcaaa tcaatctcaa gctatcaaaa tttttcaaat ctcacttgaa 60 agatcaaaaa tcaacaagga aaattcctca atttctctac caaatttact gcaagtcagg 120 atgtcaacca ttgtatttgg ctcattcact tgccacctcg atgcagctat ccaccaggat 180 aatgcagaca gattggcaaa ggcctggacc cgtccagaga accgccaagt cagtaacgtg 240 catctactgt gccgaagagc ggcaaaaagt ctcataaaca catatgagag tgcaacagct 300 agtgcttgga aagggctgga agagaagttg caacctatgt ttgctaagcg tgagtttagc 360 aaaacagtca caaagagaaa agggcttcgg tgcttcaaag aaagctctga gaagtttatt 420 gaaaagaagc tcaggaaaca gtatcaagag gagcgtgaga gattccaatt tctcaacggt 480 ccggatgcaa tagtcaacca aatcagtgtt gacaaatgtg aagcttcagt atgggtgcca 540 ttccctcata ttattgagaa acctagcttt gcgacaccat caatgaaaaa gaaggtggtg 600 tttactaagg ttaggatgtc cgaggcatca ctacaacttt ttatgaggag ggttgctgca 660 aacgccaagg caaatagtca aaaagttgag atcatagggc gtaagcgcgt agttggtaac 720 tacacaacga aaagtcgcct gacatacttt cgcacacatg ttcggcactt ggatggttca 780 aaaccacgct atgatcttgt gttggacgag gcaaccaaga agattctgca attgtttgca 840 aacacaagcg gtttccacca tgtccacaag aaaggggaga taacaccagg aatgagcgga 900 tttgtggtaa atcccatgaa tctatcggac ccaatgcaag tgtatgacac ggatcttttt 960 gtagttcgtg gaaaacacaa ctccattctc gttgactcac ggtgtaaggt ttctaaagag 1020 cagagcaatg agataatcca ctactctgac ccaggcaaac aattttggga tggtttcacc 1080 aattcattta tgcagtgcaa gctacgcgaa actgatcatc agtgcacatc tgacctggac 1140 gtgaaggagt gtggttatgt cgcagcactt gtgtgccaag cgataatccc ttgtggaaaa 1200 atcacatgtt tgcaatgtgc tcaaaagtac tcttacatgt cacaacagga aatacgtgat 1260 agattttcga cagtaattga gcagcatgag aaaacagtga tggataacta tccacaattt 1320 tcacatgttc tcgcttttct aaagaggtat cgtgaactaa tgcgcgtgga aaatcagaat 1380 tacgaagctt tcaaggatat cacgcacatg ataggcgagc gtaaagaagc acctttttcc 1440 catctcaaca aaatcaatga gttactcatt aagggtggta tgatgagtgc acaagactac 1500 atagaagcct cggatcatct gcgcgaacta gcgcgatatc agaagaatcg cacggagaac 1560 attaggagcg gatctataaa ggctttcagg aataaaatct catcaaaagc acatgtcaat 1620 atgcagctta tgtgtgacaa tcaacttgat actaatggca atttcgtgtg gggacagaga 1680 gagtatcatg ccaaacgctt ctttaggaat tacttcgatg tgatcgatgt tagcgagggc 1740 tacagacgtc atattgttcg tgaaaatcct aggggcaccc gcaaattggc cattggcaac 1800 cttgttatgt caacaaatct ggcagcacta cgtaagcagc tcttgggtga agagtgcatt 1860 cattttgagg tctcaaagga atgcactagc aagcgagggg aaaactttgt ataccaatgt 1920 tgctgtgtca cacacgaaga cggtacacca ctggagtctg aaataataag tccaacaaag 1980 aatcatttag ttgttggtaa ctcaggtgat tcgaagtatg tggatttgcc cacagcaaaa 2040 ggaggtgcaa tgttcatagc aaaggcaggt tattgttaca ttaacatttt ccttgccatg 2100 ctgatcaaca taaatgaaga cgaagccaag agtttcacaa agacggtgcg tgacactctt 2160 gtacctaagc ttggaacatg gccgtcgatg atggacttag ctacagcctg ccactttctc 2220 gcagttctct acccagaaac tcggaatgct gagcttccac gaatactcgt tgatcatgaa 2280 gcaaaaatct ttcatgtggt tgactcattc ggatcactgt caactggaat gcatgttttg 2340 aaagcgaaca caatcaatca gcttattagc tttgctagtg acacattgga ttcagatatg 2400 aaaacatacc tagttggagg tcttgaagtg gataagtgtg acgaattcaa aaatgtcaag 2460 ctcttgatca gaagcattta caagccacaa atcatggagc aggtgtttaa ggaagaacca 2520 tatttactgc tcatgagcgt tttgtcacct ggcgtcttga tggcgctgtt caatagtggt 2580 tcattgg 2587 //