ID GU480022; SV 1; linear; genomic RNA; STD; VRL; 4267 BP. XX AC GU480022; XX DT 08-MAR-2010 (Rel. 104, Created) DT 08-MAR-2010 (Rel. 104, Last updated, Version 1) XX DE Melon necrotic spot virus isolate MNSV-HM, complete genome. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4267 RA Wu H.J., Gu Q.S., Tian Y.P., Wen S.H.; RT ; RL Submitted (19-JAN-2010) to the INSDC. RL Biotechnology Centre, Zhengzhou Fruit Institute, The Chinese Academy of RL Agricultural Sciences, South of East Hanghai Road, Zhengzhou, Henan 450009, RL China XX DR MD5; 491dd2c1cda9727fdca6c528110d82e3. DR EuropePMC; PMC4337425; 24372390. DR EuropePMC; PMC5712577; 29238357. DR EuropePMC; PMC5954562; 29868081. XX FH Key Location/Qualifiers FH FT source 1..4267 FT /organism="Melon necrotic spot virus" FT /host="Cucumis melo L. (melon)" FT /isolate="MNSV-HM" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Apr-2007" FT /db_xref="taxon:11987" FT CDS 89..2464 FT /codon_start=1 FT /transl_except=(pos:893..895,aa:OTHER) FT /product="89K protein" FT /note="putative RNA-dependent RNA polymerase; replicase; FT produced by a readthrough of the amber codon" FT /db_xref="GOA:D3YJ48" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D3YJ48" FT /protein_id="ADD17683.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLNGWLSHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND FT KKELEPAPKPLSGAFDRLAWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALRWEHSVY FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQIE FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL" FT CDS 89..895 FT /codon_start=1 FT /product="29K protein" FT /db_xref="UniProtKB/TrEMBL:D3YJ49" FT /protein_id="ADD17681.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLNGWLSHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2443..2829 FT /codon_start=1 FT /transl_except=(pos:2638..2640,aa:OTHER) FT /product="14K protein" FT /note="produced by a readthrough of the amber codon at FT 2638-2640" FT /db_xref="GOA:D3YJ50" FT /db_xref="InterPro:IPR007982" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:D3YJ50" FT /protein_id="ADD17680.1" FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAIAESKQG FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN FT TYVHHFDNSSVKTQYVGISTNGDG" FT CDS 2443..2640 FT /codon_start=1 FT /product="7K protein" FT /db_xref="GOA:D3YJ51" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:D3YJ51" FT /protein_id="ADD17679.1" FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAIAESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2816..3988 FT /codon_start=1 FT /product="42K protein" FT /note="coat protein" FT /db_xref="GOA:D3YJ52" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D3YJ52" FT /protein_id="ADD17682.1" FT /translation="MAMVKRINNLPTVKLAKQALPLLANPKIVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPANDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDFGQFLFATYSGAGSTAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVT FT SSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 4267 BP; 1077 A; 894 C; 1062 G; 1234 T; 0 other; ggattactct agccggatcc ccgactctct tatttctcgt gagttagttc gtgtattgat 60 tatctgtctt aatcagtata ggttagcaat ggatactggt ttgaaatttc ttgtttctgg 120 aggtttagcc acctcgtctg ttatcaggaa agtgagtgct gtgagttcat tggattcgtc 180 cctcccttca tcatctatat tatctgccat tcatgggtct tggactagtg ctatcagcca 240 cgattgtagt aaaattgcca aggttgccgc cgtggttgga attggttatc ttggggttag 300 gattggtgcc gcttggtgcc gtcgtactcc cgggataacg aattccataa tcacctatgg 360 ggaagaagtg gttgagcaag taaaggtaga tattgatgag gatgctgaag aggagtccga 420 tactggtgag gaaattgtgg ttggcacgat aggtattggt atacatacaa acgtcaaccc 480 tgaagttcga gctaagcgca gacatagatc gaggccattc atcaagaaga tcgtaaattt 540 gactaagaat cacttcggtg gatgtcccga ctcaagtaaa tcgaacgtca tggctgtaag 600 caaatttgtt tatgaacaat gtaaacagca caattgtctt ccacatcaaa cgagattgat 660 catgagtatt gcagttccat tggtgctaag tcccgatatg tacgacattt ccagtaaagc 720 tctgctaaac agcgagatat tgacagaaaa cagagccacg ctggaccgcc tcaaaactct 780 taatgggtgg ctatcacact tggtgtgcca tccccttagc gcgaaagcct ggaggcgggc 840 aattgacaac ttgtgtggtc ttccagattg gaaggctttc aagttggtca actaggggtg 900 cctagaggag ctcgctgggt tctgtacttc ggtacggaga gggacacacc cagacatgac 960 cgagtttcct caggatcgtc ccattaagac acgcaaactg tattgtttag ggggagttgg 1020 gactagcgtg aagttcaacg tgcacaataa ctctctagct aaccttcggc gcggtctaat 1080 tgagcgcgtt ttcttcgttg aaaatgataa gaaggaacta gagcctgccc ctaaacctct 1140 tagtggtgcg tttgaccgct tagcctggtt tcgtcggaaa ctccacaata ttgtgggtac 1200 tcattccagt attagtccag gtcaattctt ggacttctat actggcagga ggcgcacgat 1260 ttatgaaggt gctgtgaaat cgttggaggg gttaagtgtt caacgaagag atgcctatct 1320 gaagacgttt gttaaagcgg agaagattaa taccactaag aagcctgacc cagctccgcg 1380 ggttatacaa ccgaggaacg taagatataa cgttgaggtt ggtcgttatc tacgtaggtt 1440 tgagcattac ctctatcgag gaattgacga aatctggaat ggccccacca taattaaagg 1500 gtacactgtc gagcaaattg ggaaaatcgc ccgtgatgct tgggactctt ttgtaagtcc 1560 tgtagcaatc gggtttgaca tgaaaaggtt cgaccaacat gtatcctccg acgctcttag 1620 atgggaacat agtgtttatc ttgatgcttt ttgccacgac tcttatcttg cagaattatt 1680 agagtggcaa ttagttaata agggcgtcgg gtatgccagt gatggaatga tcaaatataa 1740 ggttgatggg tgccggatga gtggtgacat gaatacagct atgggtaact gtctgattgc 1800 ttgtgccatc acacatgatt tcttccgtag tcgtggtatc agggcgcgtt tgatgaacaa 1860 tggggatgac tgtgtcgtaa tatgcgaaaa agaatgtgcc gcggtggtta aagccgacat 1920 ggtaaggcac tggagacaat tcgggtttca atgcgaactc gagtgtgacg cagaaatctt 1980 cgagcaaatt gagttttgtc aaatgcggcc tgtgtatgac ggggagaaat atgtgatggt 2040 gcggaatccg ttggttagtc tatctaaaga ttcctactca gtcggccctt ggaatggaat 2100 caaccatgca cgcaagtggg tgaacgcagt tggcttgtgt ggcttatccc tcactggtgg 2160 aattcctgtt gtccagagtt attataatat gatgattcgc aacacccaat ccgtgaacag 2220 ttctggcata cttcgcgatg tcagttttgc cagtggattt cgggagctag cacgattggg 2280 taacaggaaa agtggtgcca tatctgaaga cgcccgtttt agcttttatc tcgcatttgg 2340 cattactcca gatttacaac gtgccatgga aagtgactat gatgctcata ccatagagtg 2400 gggtttcgtg ccccagggaa atcctagaat acagccaatc tcatggactc tcaacgaact 2460 gtagaacaaa ctaatcctcg gggaagaagt aaagaacgtg gtgacagcgg gggaaaacaa 2520 aagaactcaa tggggcgaaa gatagccaat gacgctatcg ctgaatcgaa gcaaggagtt 2580 atgggtgcta gcacatacat tgctgataaa attaaggtga ccattaactt taatttttag 2640 tgtatggcct gttatcgttg tgactccagc cccggggatt actccggagc attgcttata 2700 ttatttatct catttgtttt cttttatatt acctcgctta gcccgcaagg aaatacttac 2760 gttcatcact tcgataattc ttccgttaaa acacaatacg ttggcatctc tacaaatggc 2820 gatggttaaa cgcattaata atctaccaac agtgaagctc gctaagcagg ctctacctct 2880 gctagcgaat cctaaaattg taaataaggc tatagatgtg gttcctttgg tcgttcaagg 2940 tggtcagaaa ttgtctaagg ctgctaagcg actgcttggc gcttatgggg gcaacatttc 3000 gtacactgag ggtgccaagc caggtgcaat atcagctcca gtcgccatca gtcggcgagt 3060 ggctggtatg aagcctaggt ttgtccgatc agaaggatct gtgaagatag ttcataggga 3120 gtttattgcc tctgttcttc ccgcaaatga tctcaccgtt aataatggtg acgtcaatgt 3180 tggtaagtat agagtcaatc ccagcaataa cgctttattt acatggcttc agggacaagc 3240 acaattatat gatatgtaca gatttactcg gctccgtttc acctatattc caactaccgg 3300 atctacttcc actggtcgtg tctctatcct ttgggataga gattcacaag accccctccc 3360 cattgatcgt gctgccatta gctcttatgc tcattacgct gactcagcgc cttgggctga 3420 gaatgtccta gtggttccgt gtgacaatac gtggaggtac atgaatgata ctaatgctgt 3480 cgaccggaag ttggttgatt ttgggcagtt tctctttgca acttattctg gtgctggtag 3540 caccgcccat ggtgaccttt acgttgagta tgctgtggaa ttcaaggatc cccagcctat 3600 cgctgggatg gtttgcatgt ttgatcgctt ggtctctttc tctgaagttg gatccactat 3660 caagggagtc aattacattg ctgatcgtga tgtgataact accgggggca atattggtgt 3720 taacatcaat attcccggga cttatcttgt cacgattgta cttaatgcta catcaattgg 3780 ttccctcacc ttcactggta actctaaact tgtaggcaat agtctcaatg ttaccagcag 3840 tggtgcatct gctcttacgt ttacccttaa ctctacaggt gtgcccaaca gtagtaattc 3900 ttcattctct gtgggtaccg tcgttgcatt gactagggta cgtatgacga tcactcgctg 3960 ctctccggaa acagcctacc tcgcctaatt taatttactg cactccaaat ctggtctcct 4020 tattcctacc tgttctcagc cagatctctg ttctggtgtc ctatagacgt ccttgtcgtg 4080 tgtagtgcgg tctggctacc cgtaacggcg tatcggcttg ggtcttcgat gattaggctc 4140 cggaatgtac gacatagctg aagatggatg gagtttggta gatcaccgct agcaaaatac 4200 actctgtgtg gggcgtgcta gtggatagtc atgtatgttt gagatgggtt gtaggcccat 4260 cccgccc 4267 //