ID GU474545; SV 1; linear; genomic RNA; STD; VRL; 4794 BP. XX AC GU474545; XX DT 05-MAR-2010 (Rel. 104, Created) DT 11-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Watermelon bud necrosis virus isolate wDel segment M, complete sequence. XX KW . XX OS Watermelon bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4794 RX DOI; 10.1007/s00705-010-0687-z. RX PUBMED; 20480193. RA Kumar R., Mandal B., Geetanjali A.S., Jain R.K., Jaiwal P.K.; RT "Genome organisation and sequence comparison suggest intraspecies RT incongruence in M RNA of Watermelon bud necrosis virus"; RL Arch. Virol. 155(8):1361-1365(2010). XX RN [2] RP 1-4794 RA Mandal B., Kumar R., Jain R.K.; RT ; RL Submitted (16-JAN-2010) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, New RL Delhi, Delhi 110012, India XX DR MD5; 76aa9ea54e696dfddd90237557e24dd2. XX FH Key Location/Qualifiers FH FT source 1..4794 FT /organism="Watermelon bud necrosis virus" FT /segment="M; medium" FT /host="watermelon" FT /isolate="wDel" FT /serotype="WSMoV" FT /mol_type="genomic RNA" FT /country="India:New Delhi, IARI" FT /isolation_source="experimental watermelon field" FT /collection_date="May-2008" FT /note="serogroup: IV" FT /db_xref="taxon:76052" FT gene 56..979 FT /gene="NSm" FT CDS 56..979 FT /codon_start=1 FT /gene="NSm" FT /product="NSm" FT /note="non-structural protein; movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:D3YHN5" FT /protein_id="ADD14052.1" FT /translation="MSRFSNVIESFRSSKNSNKELVPAVKTENNKNILARNVSQKDIDT FT AIMNKVKTLNGNQYISGGDSSVLGTYSGESEIEASSDDILSRLVIEQSAHLSNWKNDSL FT VGNGNDRVSFTINVMPTWNSKRKFMHISRLIIWVVPTIPDTKNNVKITLIDPNKMTKEE FT KIILSRQCSLKDPMCFIFHLNWSFPKERNTPGQCMRLNLTSDEKYAKGVSFASVMYSWV FT KNFCDTPIASKNNTCDVVPINRAKVIQSAALIEACKLMIPRGTSGKAIANQIKSLQKAA FT EKLALESEQEEKDIDVDIEMDSLLEI" FT gene complement(1382..4747) FT /gene="Gn/Gc" FT CDS complement(1382..4747) FT /codon_start=1 FT /gene="Gn/Gc" FT /product="glycoprotein" FT /note="Gn/Gc protein" FT /db_xref="GOA:D3YHN6" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:D3YHN6" FT /protein_id="ADD14053.1" FT /translation="MKKYYLPIYCLSLYLLFLASEVYLLNQIDNGDQLRKIQDRYKVDD FT PEDLIETEEHIPAETIKPRQKKLSRILRNGETTTQPPTQSLNCDNFEKKHCMIKGVSEF FT NAHYQIDNGGKIVSCISSSSNIFDICQYEKEFKRTKFKSFPVVPVLKLENKKVLEIGTK FT FFFVDKSNNPINIDPKVNLKSPTVARLSVRLSGGCKINQVSMSSPYQIKLRSEENIGVL FT IKNVKNPKSESIKSITGDSTINFKPEELDGNHFLLCGDKSSLIAKVDIPMRKCVAKYSE FT EPKKIFFCTNFSYFKWIFVFLTIAFPISWLIWKTKNALSIWYDIIGILTYPVLWAINWL FT WPYFPFKCRVCGCVSFLTHSCAEKCVCNQERASKTHTDDCYLFNRSKGEWRKLTLIQQF FT QFIINTKLSTNFLVLITKMILASILISYIPSSIALKQSNLRVEKCYYNLNLDSLTTDKF FT GMADNGYETCECSIGNVISETVYRSGVPMSRATALNDCVLGSELCLVSNNQAQNLFACR FT NGCNSLASIKNIPNTKFNKFYKGKSFKGNLTSLKIANRLRDGYMDSPIESKILEEEPIK FT EYKFYKSLKVDDVPPENLMPRQSLVFSTEVDGKYRYLLEMDIKANTGSVYLLSDDAAHS FT PMEFMVYVKSVGVEYDVRYKYSTAKIDTTVADYLVTCTGSCADCVKQKPKVGVLDFCVT FT PTSWWGCEELGCLAINEGSICGHCTNIYDLSSLVNIYQVVESHVTAEICIKSLDRYTCK FT KHSDRSPIQTDYYQLDMSIDLHNDYMSTDKLFAVTKQQKILTGNIADLGDFSGSSFGHP FT QITIDGVPLSVPATLSQNDFTWSCSAVGDKKVNIKQCGLYTYSAIYILSPSKDVSHLDE FT NSNKLYMEKDFLVGKLKVVIDMPKEMFKKIPTKPVLSEVKMICSGCAQCAAGIDCNITY FT TSDTTFSSRLVMDTCSFKSDQLGTFLGPNEKSIKVYCSEEISDKSLKLIPEDQEELTVD FT IQVDEFTEVDQDTIIHFDDKSAHDEKIHHSDTSISSLWDWIKAPFNWVASFFGTFFDLV FT RIILVITAACIGLYILSSIFRLSKTYYADRRRQKLEDAIESVESSVLLTNYTGVDQARK FT RKSPPKGYDFSLDI" XX SQ Sequence 4794 BP; 1516 A; 854 C; 831 G; 1593 T; 0 other; agagcaatcg gtgcgccaat tactagataa atcatcaaat aattaacaag aaataatgtc 60 tcgcttttct aacgtgatag aatctttccg ttcttcaaag aactcaaaca aagagttggt 120 gcctgctgta aaaacagaaa acaataagaa tattctagct agaaatgttt ctcagaagga 180 tattgatact gctataatga acaaagttaa gacacttaat ggaaatcagt atatttcagg 240 aggagattct agtgttttgg gcacttattc tggtgaatcg gaaatagaag catcttctga 300 cgatattcta tccaggctag ttattgagca gagcgctcac ttaagcaact ggaaaaatga 360 ttcacttgtt ggaaatggaa atgatagggt gagtttcacc ataaatgtta tgccaacatg 420 gaacagtaag cgtaaattca tgcacatatc aagacttata atttgggttg tccctacaat 480 ccctgacact aaaaacaatg ttaaaattac tttgattgac ccaaacaaaa tgaccaaaga 540 agagaaaata atactaagca gacaatgctc attaaaagat cctatgtgtt ttatcttcca 600 tcttaattgg tcattcccaa aagaaagaaa cactcccggg cagtgcatga ggcttaatct 660 gactagtgat gagaagtatg caaaaggagt tagctttgcc tctgtcatgt attcttgggt 720 gaagaacttc tgcgatactc ctattgcatc aaaaaataac acttgtgatg ttgtgcctat 780 caatagagct aaggtcattc aatctgctgc attaatcgaa gcatgtaagt taatgatacc 840 tagaggaact agtgggaaag caatagctaa tcagattaag agtttgcaga aagctgcaga 900 aaagctagct ttagaatcag aacaagaaga aaaagatatt gatgtcgata tagagatgga 960 tagccttctt gaaatttaag attactgatt ttaagtctga attatatcta ccaaccaagc 1020 tctaattacg tttgtttcta ataatttaag tttagaagtt tgtgttactt ataagagtat 1080 tttatgatct gctattcgaa tgtttgtgtg tttgtgtatc tatgtattgt gttatatttt 1140 atctttagaa ataagataat caaaaactaa acaaaaatga aaataagtaa aaacaacaaa 1200 aaaagagaaa aacaaaacaa aaaacaaaaa aactatatat atataaataa acaaggccta 1260 ggccaacttt ggcttttcag ccttttttgg attttgttgc tttatattgt ttttgggttt 1320 tttgtctgtt ttaaatatac atatatatat atatactttg caaattaact tacattcaga 1380 attaaatatc taaagaaaaa tcataacctt taggagggga tttcctcttc cttgcttgat 1440 ctactcctgt gtaatttgtc aaaagaacac ttgattcaac agattctata gcatcttcta 1500 atttttgcct tcttctatct gcataatatg tcttagataa tctgaaaatg ctacttagaa 1560 tgtacaatcc gatacatgct gctgtaatga ccaagataat cctgactaga tcgaagaaag 1620 tgccgaagaa agaagctacc caattgaagg gtgccttgat ccagtcccac aaactggaaa 1680 tagatgtatc agaatgatgt atcttttcat catgtgcact tttatcatca aaatgtatta 1740 ttgtatcttg atcaacttca gtaaactcat ccacctgaat gtccactgtc aattcttctt 1800 gatcctcagg gattaacttc agagatttgt ctgagatttc ttcagagcaa taaaccttga 1860 tagatttttc atttggacct agaaatgttc ccaattgatc agatttaaaa gagcatgtat 1920 ccatgactaa tcttgatgag aatgtagtgt ctgacgtgta agttatattg caatcaattc 1980 ctgcagcaca ttgagcacaa cctgaacaga tcattttaac ttcagacagg acaggctttg 2040 ttgggatctt tttgaacatt tctttaggca tatctatgac cactttcaat ttacccacta 2100 aaaaatcctt ctccatgtac agtttgttac tattctcatc taagtgagat acatctttgg 2160 atggagataa gatatagatg gcactgtatg tgtaaagccc acattgcttt atattaactt 2220 tcttatcccc aacagcacta caactccagg tgaaatcatt ttgagacaga gttgctggga 2280 ctgatagtgg gacaccatct attgtgatct gaggatgtcc aaacgatgat cctgaaaaat 2340 cccccaagtc agctatgttg cccgtaagaa ttttctgctg tttagtcacg gcaaatagtt 2400 tatcagtgct catataatcg ttgtgaagat ctatggacat gtcaagttga tagtaatctg 2460 tttggatagg agatctgtct gagtgttttt tgcatgtgta tctatctaaa gattttatgc 2520 agatctcagc agtaacatga ctctcaacga cctgatagat gttgaccaag cttgacaagt 2580 cataaatgtt cgtacaatgt ccacagatgg atccttcgtt aattgctaga caaccaagtt 2640 cttcacagcc ccaccaagag gttggtgtta cacagaagtc taaaactccc actttaggtt 2700 tttgttttac acagtcagca caactccccg tgcatgtcac taggtaatct gccactgttg 2760 tgtcaatctt tgctgtggaa tatttgtacc tcacatcata ttcaacacca acacttttta 2820 cataaaccat aaactccatg ggagaatgtg ctgcatcgtc actgagtaag taaactgatc 2880 ccgtatttgc ttttatgtcc atttccaaga gatatctata tttcccatca acttcagttg 2940 agaacaccaa agattgtctt ggcattaaat tctcaggagg tacatcatcg acctttaagc 3000 ttttataaaa tttatattct ttgataggtt cttcttccag gattttagat tcaattgggc 3060 tgtccatata accatctctt aatctattag ctatcttcag actagtaaga ttgcctttaa 3120 aagatttccc tttgtagaat ttattaaatt tggtgtttgg tatatttttt atggatgcca 3180 aagagttgca accatttctg catgcaaaca aattttgagc ctggttgttg cttaccaaac 3240 acaattctga acccaaaaca caatcgttca atgctgttgc tctagacatt ggcacaccag 3300 acctgtatac tgtttcagag attacatttc caatagagca ctcacatgtc tcatatccat 3360 tatctgccat cccaaacttg tctgtagtca aggagtctaa atttaagtta taatagcatt 3420 tttcaacacg caagttggat tgtttaagtg caatacttga tggtatataa gatataagaa 3480 tagatgccaa gatcattttt gttataagaa ctaagaaatt ggtgcttaat tttgtattta 3540 ttatgaactg aaattgctga atcaaagtta attttctcca ctcaccttta cttctgttga 3600 aaagatagca atcatcggtg tgggtttttg atgctctctc ttgattgcaa acacattttt 3660 ctgcgcagga atgagtcaag aatgatacgc aaccgcaaac tctacattta aatgggaaat 3720 atggccataa ccagttgatg gcccaaagaa cgggatatgt taagatcccg attatgtcgt 3780 accatatgct cagagcattt ttagttttcc aaatgagcca tgatataggg aaagctattg 3840 tcaaaaacac aaaaatccat ttaaaataag aaaaatttgt gcagaagaaa atcttttttg 3900 gctcctctga gtatttggca acacatttcc tcattggtat atctactttg gcaatcaagc 3960 tagatttatc accacaaagg agaaaatgat ttccatctag ttcttctggt ttgaaattta 4020 ttgttgaatc acctgtgatg gatttgatgc tttcggattt aggatttttt acatttttta 4080 ttaagactcc aatgttctct tcagatctca gtttgatttg ataaggagat gacatcgaca 4140 cttgatttat tttgcaacca ccagacaacc ttacagaaag ccgtgccaca gtaggggact 4200 ttaaatttac tttaggatca atgttgatag ggttgtttga cttgtctaca aaaaagaact 4260 ttgttccaat ctctaaaact tttttattct ctaattttag cacgggaacc acaggaaagc 4320 ttttgaattt tgtcctttta aattcttttt catattggca aatatcaaat atattggaag 4380 agctgcttat acatgaaacg atttttcctc cattgtcaat ttggtaatga gcgttgaact 4440 cgctcacacc ctttatcatg caatgctttt tctcaaaatt gtcacagttc aagctctggg 4500 taggtggttg agtcgtggtt tcaccatttc ttaagatcct ggacaatttc ttctgcctag 4560 gcttgattgt ttcagctgga atgtgctcct ctgtttcgat aagatcttcc ggatcatcta 4620 ctttgtatct atcttgaatc tttctcaact ggtcaccatt atctatctga ttcaacaggt 4680 agacctcaga cgcgagaaag agcaaatata gacttagaca gtagataggt agatagtatt 4740 tcttcatctt tatgaggtat ttctaaggtg atgaattgtt gcactgattg ctct 4794 //