ID GU451249; SV 1; circular; genomic DNA; STD; VRL; 2844 BP. XX AC GU451249; XX DT 02-MAR-2010 (Rel. 104, Created) DT 02-MAR-2010 (Rel. 104, Last updated, Version 1) XX DE Jatropha leaf curl virus strain JCLCV/PDVN-MPR-Guj-1 segment DNA-A, DE complete sequence. XX KW . XX OS Jatropha leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2844 RA Sudheer Pamidimarri D.V.N., Rahman H., Reddy M.P., Chikara J.; RT "Genome sequencing and analysis of Jatropha leaf curl virus"; RL Unpublished. XX RN [2] RP 1-2844 RA Sudheer Pamidimarri D.V.N., Rahman H., Reddy M.P., Chikara J.; RT ; RL Submitted (09-JAN-2010) to the INSDC. RL Biotechnology, Shree M. & N. Virani Science College, Saurashtra University, RL Rajkot, Gujarat 360005, India XX DR MD5; f4328b8d80802f0fe35f06ee1bfb6877. XX FH Key Location/Qualifiers FH FT source 1..2844 FT /organism="Jatropha leaf curl virus" FT /segment="DNA-A" FT /host="Jatropha curcas" FT /strain="JCLCV/PDVN-MPR-Guj-1" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="16-Jun-2009" FT /db_xref="taxon:543876" FT CDS 175..528 FT /codon_start=1 FT /product="precoat protein" FT /note="AV2" FT /db_xref="GOA:D3YC63" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:D3YC63" FT /protein_id="ADD10369.1" FT /translation="MWDPLINEFPETLHGFRCMLAVKYIQALLSSYAPDTVGYEYLRDL FT ISVLRCRDYAKASVRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATS FT EQKTVDIQEKESS" FT misc_feature 335..1072 FT /note="nonfunctional coat protein due to mutation; AV1" FT CDS complement(1107..1511) FT /codon_start=1 FT /product="replication enhancer protein" FT /note="AC3" FT /db_xref="GOA:D3YC64" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3YC64" FT /protein_id="ADD10370.1" FT /translation="MDSRTGEPITAARLNNGVFIWTVPNPLYFRLLSHMSRPFNLDQDI FT IHLRIQFNHNLRQALQIHKCFLSFKVWTRSRIQTGIFLRVFKTQVIRYLDRLGVISINL FT VIRAVDHVLYNVLHHTMQVEQSNEIMFRLY" FT CDS complement(1252..1656) FT /codon_start=1 FT /product="unknown" FT /note="AC2" FT /db_xref="GOA:D3YC65" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D3YC65" FT /protein_id="ADD10371.1" FT /translation="MLSCSTATVPLQLLSRNARGDLRSGGDKAEEDRLEVRVFIFSVNN FT CANHGFTHRGTHHCSSFEQWRLYLDSPKSSVLPTPQSHEQALQSGSGHHTPPNTIQSQS FT QASTTDTQVLPELQSLDSFTDSDWDFLTSL" FT misc_feature complement(1590..2699) FT /note="nonfunctional rep protein due to mutation; AC1" XX SQ Sequence 2844 BP; 814 A; 619 C; 682 G; 729 T; 0 other; accggatggc cgcgattttt ttaacgtggg tcccacagca gacaaacaga caaagaaaag 60 aaaggggaac ccaccacaaa gacaaaagaa ggcgtccaat ggagagcgcg cctggaactc 120 aaactaaagt cccgcgcgct ataaaacttg ctggcgaagg agtagagccg caacatgtgg 180 gatccattaa tcaacgagtt tcccgaaacc ctgcacgggt ttcgctgtat gcttgcagtc 240 aaatatatac aagctctact ctcttcgtac gctcctgata cagtcggata cgagtacctt 300 cgtgatctga tcagcgtact acgctgccgc gactatgcca aagcgtctgt tcgatatggt 360 aggatcgtcg ccgctaagaa taacacgccg gaaactgaac ttcgggagtc cctcccgtct 420 cattgccagt gccgtcactg ccccagacat gggatacaaa aggagggcgt ggacgtggcg 480 accagcgaac agaaaaccgt cgatatacag gagaaggaga gctcctgatg tgccgcgtgg 540 atgtgaggga ccatgcaaag tacagtcatt cgaaaagaga catgatgtca cgcacacggg 600 gggcgttcta tgcatatctg acgtcacacg cggcaatggt atcacgcata gagtgggtaa 660 gagattctgc gtgaaatccg tctatatact tggcaagatt tggatggacg agaatatcaa 720 gacgaagaac catactaaca gcgtgatctt ctggttggtc agagacaggc gtccatttgg 780 cactccaatg gatctgggtc aagtctttaa catgtatgat aacgagccca gtacagccac 840 agtcaagaac gatctgaggg atagatatca agtgttacac aaatgcaacg cgtcggttac 900 tggtggtgtc tatgcatcga aggaacaggc gataatcaga agttctacag agtcaataat 960 tatgtggtct ataatcacca ggaagccgcg aaatacgaga atcatactga gaatgcgtta 1020 ttattgtata tggcatgtac tcatgcatca aatccagtgt atgcaacatt gaaaatacgc 1080 atatatttct acgactcagt atcaaattaa taaagacgaa acattatttc attgctttgt 1140 tcaacctgca tcgtatgatg cagtacatta tacaatacat gatctacagc cctaattaca 1200 agattaattg aaattacacc taatctatct aaatatctaa taacttgagt cttaaagact 1260 cgtaagaaaa tcccagtctg aatccgtgaa cgagtccaga ctttgaagct caggaagcac 1320 ttgtgtatct gtagtgcttg cctgagattg tgattgaatt gtattcggag gtgtatgatg 1380 tcctgatcca gattgaaggg cctgctcatg tgactgagga gtcggaagta cagaggattt 1440 gggactgtcc agataaagac gccattgttc aaacgagctg cagtgatggg ttcccctgtg 1500 cgtgaatcca tgattcgcgc agttattgac agaaaatatg aacacccgca cttcaagtcg 1560 atcctcctcc gccttatccc cccctgatct caggtcgcct ctggcgtttc ttgaaaggag 1620 ctggaggggg actgtcgctg ttgaacacga aagcattctt gagaagcgga ggaggagtag 1680 agaggttctg agaggaagac gaaaaagaca ttcttaacag cccagttctt taatgctgcg 1740 ttcttatctt cgtctaaata ctctttatag ctggaattgg gcccaggatt gcagaggaag 1800 attgtcggaa tgcccccttt aatttgaacg ggctttccat actttgtgtt actttgccag 1860 tctctctggg cccccataaa ttccttgaag tgcttgagat aatgcggatc aacatcatca 1920 atgacgttat accatacgtc attactatac actcttggac tgagatccaa gtgaccgcat 1980 aaataattgt gtgggccgag agaccgagcc cacattgtct tcccagtacg actatcgccc 2040 tctaagacaa tacttatggg tctaaaaggc cgcgcagcgg gactgacaac attttcagaa 2100 gcccaaatct cgagttcttc tggaactcga tcaaacgaag aaagaggata aggagaaaca 2160 taatctactc taggaggtgt aaatatcctc tctaaattgg actttaaatt atgatagtga 2220 aaaatataat ctcttggcat cttttcacgg ataatagcta gagcagcgtc tgcagagtcg 2280 gggtttaggg cctccgctgc tgcatcatta gctgtctgtt gacctcctct agcagatctt 2340 ccatcgatct gaaaagaacc ccagtcgatg taatctccgt ccttctcgat ataggactta 2400 acatcagagg aggacttagc tccctggata tttggatgga attgggagga gctgtgagga 2460 tgggtgagat cgaaatgtcg tgcatttctg aatctggcct tacccttgaa ctggataagg 2520 gcatggatat gcagtgaccc atcctcgtgt ttctcctgcg cgactctaat aaataattta 2580 tcggaaggac aggatatgtt tcgcaggagg tccaagactg tctccttgga taatgggcat 2640 ttgggataag tgaggaatat gtttttagcg cttactgaaa atgcgttaac acgaggcatt 2700 ttaaacagag ggtattgggg agacgctgta aaactctcta caattgggga cttggggacg 2760 catttatacc agtgtcccca aatggcacgc ttgtaatttt tttgtgaaaa tcccctgtcc 2820 aacagcggcc atccgattaa tatt 2844 //