ID   GU395301; SV 1; linear; genomic DNA; STD; VRL; 1630 BP.
XX
AC   GU395301;
XX
DT   25-MAR-2010 (Rel. 104, Created)
DT   28-JAN-2011 (Rel. 107, Last updated, Version 3)
XX
DE   East African cassava mosaic virus (Uganda variant) isolate Gamago AC1
DE   protein (AC1) gene, partial cds; AC4 protein (AC4) and AV2 protein (AV2)
DE   genes, complete cds; and nonfunctional AV4 protein (AV4) gene, partial
DE   sequence.
XX
KW   .
XX
OS   East African cassava mosaic virus (Uganda variant)
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1630
RA   Akinbade S.A., Hanna R., Nguenkam A., Njukwe E., Fotso A., Doumtsop A.,
RA   Ngeve J., Tenku S.T.N., Kumar P.L.;
RT   "First report of the East African cassava mosaic virus-Uganda (EACMV-UG)
RT   infecting cassava (Manihot esculenta) in Cameroon";
RL   New Dis. Rep. 21:22-22(2010).
XX
RN   [2]
RP   1-1630
RA   Lava Kumar P.;
RT   ;
RL   Submitted (07-JAN-2010) to the INSDC.
RL   Virology & Molecular Diagnostics, International Institute of Tropical
RL   Agriculture (IITA), Oyo Road, Ibadan, Oyo PMB5320, Nigeria
XX
DR   MD5; 5fa81347aea866d20531349b73e71961.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1630
FT                   /organism="East African cassava mosaic virus (Uganda
FT                   variant)"
FT                   /segment="DNA A"
FT                   /host="Manihot esculenta (cassava)"
FT                   /isolate="Gamago"
FT                   /mol_type="genomic DNA"
FT                   /country="Cameroon"
FT                   /isolation_source="leaf"
FT                   /collection_date="Mar-2009"
FT                   /db_xref="taxon:375009"
FT   gene            complement(<1..536)
FT                   /gene="AC1"
FT   CDS             complement(<1..536)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="AC1 protein"
FT                   /db_xref="GOA:D4NXJ6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:D4NXJ6"
FT                   /protein_id="ADD85138.1"
FT                   /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQGLSYPTNIKFIR
FT                   VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI
FT                   EKGGEFLDAGLFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH
FT                   NISANADRIFQAPPQT"
FT   gene            complement(146..379)
FT                   /gene="AC4"
FT   CDS             complement(146..379)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:D4NXJ7"
FT                   /protein_id="ADD85137.1"
FT                   /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRELNHR
FT                   PMSKLTLKREGNFLTLDFSKSMPEVQGGKASI"
FT   gene            864..1220
FT                   /gene="AV2"
FT   CDS             864..1220
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:D4NXJ8"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:D4NXJ8"
FT                   /protein_id="ADD85139.1"
FT                   /translation="MWDPLVNDFPETVHGFRSMLAVKYLLHLEQEYERGTVGAEYIRDL
FT                   IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS
FT                   ETQDVQNVSKPRCP"
FT   gene            1024..>1630
FT                   /gene="AV4"
FT   misc_feature    1024..>1630
FT                   /gene="AV4"
FT                   /note="nonfunctional AV4 protein due to mutation"
XX
SQ   Sequence 1630 BP; 435 A; 325 C; 434 G; 436 T; 0 other;
     gtttgtggcg gagcctggaa gattctatct gcgttagcag atatgttatg gaactgtaaa        60
     aaaaaggact tgggatcttt ttctttaata atttgaagag cctcggattt agacgaagca       120
     ttcaacgcgt ctgcatatac ctgagctaaa tgctggcctt ccccccttgc acttctggca       180
     tcgacttgga aaagtccagc gtcaagaaat tcccctccct tttcaatgta agctttgaca       240
     tcggacgatg atttagctcc ctgaatgttc ggatggaaat gtgttgatcg ggatggggaa       300
     atgagatcga agaatctcgg gttggtacat tggaacttgc cttcgaattg gatgagaaca       360
     tggagatgag gcaccccatc ctgatgtagt tctctgcaaa ccctaatgaa tttgatattc       420
     gtcgggtacg aaaggccttg taattgggaa agggcttctt ctttggttaa tgagcatcgg       480
     ggataggtta tgaaataatt tttggcattt atttgaaaac gaccggctct tggcatattg       540
     gctgtcgttt tgaatcgggg gacactcaaa actccagggg aacggtggaa tggggggcat       600
     tatatatgat gtcccccaat ggcatatgtg taaataggta gacttccatt caaattttga       660
     attccgaata tgggcggcca tccgattaat attaccggaa tggccgcgcc ccgaaaaagc       720
     agggggaccc ccaatgaccc ccccgtgaaa gaaagtggtc cctgccccct ttttttggtc       780
     gcgcaagcat tttcccggaa ggaaggctaa atatttgttg tttgtcttta aagactcctc       840
     ccgaagtagt agagcgcgtc aacatgtggg atccattggt gaacgatttt cccgaaaccg       900
     ttcacggttt ccgttctatg cttgctgtta aatacctgtt acatctggaa caggaatacg       960
     agcgcggtac tgtcggggcg gagtatatac gggatctaat aggggtgcta cggtgtaaga      1020
     attatgtcga agcgaccagg agatataata atctcaacac ccgtatccaa ggtgcggagg      1080
     aggctgaact tcgacagccc atacacgaac cgtgttgttg cccccactgt ccgcgtcacc      1140
     agaagcaaaa tatgggccaa caggcccatg tatcggaaac ccaagatgta cagaatgtat      1200
     cgaagcccag atgtccctaa gggctgtgaa ggcccatgta aggtccagtc gtttgagcag      1260
     agggatgatg tgaagcacct tggtatctgt aaggtgatta gtgatgtgac gcgtgggcct      1320
     gggctgacac acagggtcgg aaagaggttt tgtatcaagt ccatttacat tcttggtaag      1380
     atctggatgg atgaaaatat taagaagcag aatcacacta ataatgtgat gttttacctg      1440
     cttagggata gaaggccgta tggcaatgcg ccccaagact ttgggcagat atttaacatg      1500
     tttgataatg agcccagtac tgcaacaatt aagaacgatt tgagggatag gtttcaggtg      1560
     ttgaggaaat ttcatgccac tgttgttggt ggtccatctg gcatgaagga gcaggcgttg      1620
     ggaaaaggtt                                                             1630
//