ID   GU385766; SV 1; linear; genomic DNA; STD; VRL; 854 BP.
XX
AC   GU385766;
XX
DT   01-MAR-2010 (Rel. 104, Created)
DT   28-OCT-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Cotton leaf curl virus isolate Lucknow movement/precoat protein (AV2) gene,
DE   partial cds; coat protein (AV1) gene, complete cds; and replication
DE   enhancer protein gene, partial cds.
XX
KW   .
XX
OS   Cotton leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-854
RX   DOI; 10.1007/s11262-010-0531-2.
RX   PUBMED; 20890652.
RA   Kumar A., Kumar J., Khan Z.A., Yadav N., Sinha V., Bhatnagar D., Khan J.A.;
RT   "Study of betasatellite molecule from leaf curl disease of sunn hemp
RT   (Crotalaria juncea) in India";
RL   Virus Genes 41(3):432-440(2010).
XX
RN   [2]
RP   1-854
RA   Kumar A., Kumar J., Khan J.A.;
RT   ;
RL   Submitted (05-JAN-2010) to the INSDC.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, Uttar Pradesh 226001, India
XX
DR   MD5; 3934224019ea29a1bf9d58783baee507.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..854
FT                   /organism="Cotton leaf curl virus"
FT                   /host="Crotalaria juncea"
FT                   /isolate="Lucknow"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf tissue"
FT                   /collection_date="Sep-2008"
FT                   /db_xref="taxon:53010"
FT   gene            <1..230
FT                   /gene="AV2"
FT   CDS             <1..230
FT                   /codon_start=3
FT                   /gene="AV2"
FT                   /product="movement/precoat protein"
FT                   /db_xref="GOA:D3Y1K4"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:D3Y1K4"
FT                   /protein_id="ADC93764.1"
FT                   /translation="DLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPH
FT                   CPRHQSKSMGEQAHEQKAQDVQDVQKSRCS"
FT   gene            34..807
FT                   /gene="AV1"
FT   CDS             34..804
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:D3Y1K5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:D3Y1K5"
FT                   /protein_id="ADC93763.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(801..>854)
FT                   /codon_start=1
FT                   /product="replication enhancer protein"
FT                   /db_xref="UniProtKB/TrEMBL:D3Y1K6"
FT                   /protein_id="ADC93765.1"
FT                   /translation="EHVVYVDQSSSIKFNIY"
XX
SQ   Sequence 854 BP; 249 A; 151 C; 209 G; 245 T; 0 other;
     gggatttgat ttcagtaata agggccagga attatgtcga agcgaccagc agatataatc        60
     atttccacgc ccgcttcgaa ggtacgccgc cgtctcaact tcgacagccc atatgtgagc       120
     cgtgctgctg cccccattgt ccgcgtcacc aaagcaaaag catgggcgaa caggcccatg       180
     aacagaaagc ccaggatgta caggatgtac agaagtccag atgttcctag aggatgtgaa       240
     ggtccatgta aggttcagtc gtttgagtcc agacatgata ttcagcatat aggtaaagtc       300
     atgtgtgtta gtgatgttac tcgtggtact gggcttaccc atagagttgg taagagattt       360
     tgtgttaagt ctgtgtatgt tttgggtaag atatggatgg atgagaacat taagaccaag       420
     aatcacacga atagtgtgat gtttttctta gttagagatc gtagacctgt tgataaacct       480
     caagattttg gagaggtatt taacatgttt gataatgagc ccagtacggc gactgtgaag       540
     aatgttcatc gtgataggta tcaagtgctg cgcaaatggt atgcaactgt caccggtgga       600
     caatacgctt caaaggaaca agctcttgtg aagaagttta ttagggttaa taattatgtt       660
     gtgtataacc agcaggaagc tggtaagtat gagaatcatt ctgagaacgc tttaatgttg       720
     tatatggcgt gtactcacgc ctctaaccca gtgtatgcta ctttgaagat acggatctac       780
     ttctatgatt ccgtgacaaa ttaataaata ttgaatttta ttgaagatga ttggtctaca       840
     tatacaacat gctc                                                         854
//