ID GU358449; SV 1; circular; genomic DNA; STD; VRL; 2571 BP. XX AC GU358449; XX DT 02-FEB-2010 (Rel. 103, Created) DT 02-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE Tomato severe rugose virus strain Sumare segment DNA-B, complete sequence. XX KW . XX OS Tomato severe rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2571 RX DOI; 10.1007/s10327-009-0198-5. RX AGRICOLA; IND44293718. RA Barbosa J.C., Barreto S.S., Inoue-Nagata A.K., Reis M.S., Firmino A.C., RA Bergamin Filho A., Rezende J.A.M.; RT "Natural infection of Nicandra physaloides by Tomato severe rugose virus in RT Brazil"; RL J. Gen. Plant Pathol. 75(6):440-443(2009). XX RN [2] RP 1-2571 RA Barbosa J.C., Firmino A.C., Barreto S.S., Inoue-Nagata A.K., RA Bergamin Filho A., Rezende J.A.M.; RT ; RL Submitted (24-DEC-2009) to the INSDC. RL Departamento de Fitopatologia e Nematologia, ESALQ, Universidade de Sao RL Paulo, Av. Padua Dias, 11, Piracicaba, SP 11, Brazil XX DR MD5; dc032370e35795b6786cf3146977dd04. XX FH Key Location/Qualifiers FH FT source 1..2571 FT /organism="Tomato severe rugose virus" FT /segment="DNA-B" FT /host="Nicandra physaloides" FT /strain="Sumare" FT /mol_type="genomic DNA" FT /country="Brazil:Sao Paulo state, Sumare" FT /collected_by="Julio C. Barbosa" FT /collection_date="Feb-2007" FT /db_xref="taxon:158463" FT rep_origin join(2189..2571,1..410) FT /note="intergenic spacer; contains the common region" FT gene 411..1181 FT /gene="BV1" FT CDS 411..1181 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:D3K2N4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D3K2N4" FT /protein_id="ADB90412.1" FT /translation="MYPIKYRRGMSFNHRRSYSSNPVFKRLHGAKRSDFKRRSSNQIKS FT MDETKMSVQRIHENQFGPEFVIGHNSAISTFITFPTLCKTVPNRCRSYIKLRRLRFKGT FT IKIDRVHAEVNMDGTSPMIEGVFSLVVVVDRKPHLGSSGTLHSFDEIFGARIHSHGNLA FT IVSSLKERFYIRHVWKKVISVEKDTTMVDVEGSTILSNRRFNCWSSFKDIDRESCNGVY FT ANISKNALLVYYCWMSDNVSKASTFVSFDLDYVG" FT gene complement(1307..2188) FT /gene="BC1" FT CDS complement(1307..2188) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:D3K2N5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D3K2N5" FT /protein_id="ADB90413.1" FT /translation="MESQLVNPPNAFNYIESKRDEYQLSHDLTEIMLQFPSTASQLSPR FT LSRSCMKIDHCVIEYRQQVPINAVGSVIVEIHDRRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQSTHFAKFKGRLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDIDFSHVGYGKWERKMIRSASISRLGLHNPLEIMPGESWAVRSTIGLSPSEAG FT SDIENAMHPYRQLHRLGTGTLDPGDSASVIGAQRAQSNITLSMAQLNELVKAAAHECIN FT SNCTPSQPKSLK" XX SQ Sequence 2571 BP; 731 A; 443 C; 537 G; 860 T; 0 other; accggatggc cgcgggattt ttcttatctg ctacgtggcg aaatcgtgta cgttgcctcg 60 cgctttccat tttaattgag cgcctttttg aagtccgcga aatgcgttaa ttgtcttttt 120 gaaatccgct gtttgtgcat cacctttaat ttgaattaaa ggttggatag ttcatattga 180 tcaatcattt cgcttgttta cttcctgtcg tggtgtaatt acaaccgttc gttaaaaata 240 taagaaattt acgacgtgga ctgtctaaat ttcatctaca tagttaattt gacaaatgaa 300 tgcatattta aactctgctt tcgtgtgggt ttacaccacg tctatacata ttgtatagag 360 ttattttgtc taagtataat ttttattttg tcttatctta ttatctgaac atgtatccca 420 ttaagtatag acgtggaatg tcgtttaatc atcgacgatc ttactcatct aatcccgtat 480 ttaagcgttt acacggagcg aaacgaagtg atttcaagcg tcgttcgagt aatcagatta 540 agagcatgga tgagactaaa atgtctgttc agcggattca tgagaaccag tttggccctg 600 aatttgtaat tggccacaat tctgccatat ccacattcat tacattccct actctttgta 660 agactgtccc gaaccgttgt aggtcataca taaagttaag acgactacgt tttaaaggca 720 caatcaagat tgaccgtgtt catgctgagg tgaatatgga cggtacaagt ccaatgattg 780 aaggagtctt ctctctggtt gtagtcgttg atcgcaaacc tcatttgggc tcatctggaa 840 ctctgcattc ttttgatgag atatttggtg caaggattca tagtcatggt aacctggcaa 900 tagtatcctc tctgaaagag cgtttttaca tacgtcacgt ttggaagaaa gtaatatctg 960 ttgagaagga tacaaccatg gttgatgttg aaggaagtac tattttatct aacaggcgtt 1020 ttaattgttg gtcatccttt aaggatattg accgtgaatc atgtaatggt gtttatgcaa 1080 acataagcaa gaacgccctg ttagtttatt actgttggat gtctgataat gtgtctaagg 1140 catcgacatt tgtatcattt gaccttgatt atgttggcta aataataagt gtaatacgtg 1200 attagtaata atgtttaact cgcttcaata ataaatacaa gaatttgttc agtaataata 1260 ttcaactcgc aataataaca aaaaaatgtg tttaataata taaaatttat tttaaagatt 1320 ttggctgtga aggagtacag ttgctgttta tacattcatg ggccgctgct ttaacaagtt 1380 cgtttaattg ggccattgac agtgttatgt tcgattgggc cctttgagca ccaattacgg 1440 acgcagaatc acctgggtct aaagtgcctg tacccagtct atgtaattgt ctgtatggat 1500 gcatcgcgtt ctctatatct gagcccgcct ctgatgggct taagcctata gtacttctaa 1560 cagcccatga ctctccgggc attatttcaa gtgggttgtg aaggcccaat cttgatattg 1620 aggcggatct gatcatcttc ctttcccatt tgccatagcc tacgtgactg aaatcaatgt 1680 ccttatctgt aaattgtttt gaaaggatct tcaccgttgg ggcacggaaa ggtatatcaa 1740 ccgaatgttt agccgtcgag agtttcagtc tccctttgaa tttagcgaag tgggtactct 1800 ggtgaacgtt cgtgtcacat actctgtagt acaatttcca tggaattggg tccttaaggg 1860 agaagaacga cgacgaaaag tagtgaagat ctatgttaca tctgatagga aaggtccacg 1920 acgcctgtag tgattcattg tccgtcattc ttctgtcatg aatttcgact ataactgaac 1980 ctacggcgtt tattggtacc tgttgtctgt attctattac gcaatggtcg attttcatac 2040 agctacgact aagccttggg cttaattgag acgccgttga agggaattga agcataatct 2100 cggttagatc atgggaaagc tgatattcat cacgcttaga ttctatataa ttaaatgcgt 2160 tgggaggatt cacaagctga gattccatta ttgaaaatag ggagcgcagc gacaatgttt 2220 gaggaaactt aataagggaa gatgataata ttttcgtcaa ctgaatatat gacaagaaaa 2280 ttgtctgttg atccaattgg gaaattggag atgataataa ctaaaaaacg aggaatcaga 2340 agaagacgaa ttgagatgag atattgtcta ttttaggtgt aattgataaa tacttctcta 2400 tttgctcttt aaatagattt tttaaggcaa tggcatattt gtaaatatga cccttactac 2460 caattggtag ctgctctaaa actcatatga attggtagtt atggtagctc ttatatagta 2520 gaagttcttc taaggagatt gctacacgtg gcggccatcc gttataatat t 2571 //