ID GU327367; SV 1; linear; genomic RNA; STD; VRL; 3050 BP. XX AC GU327367; XX DT 08-FEB-2010 (Rel. 103, Created) DT 08-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE Cucumber mosaic virus strain Z1 segment RNA-2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3050 RA Kim M.K., Choi H.S., Kwak H.R., Ko S.J., Lee S.H., Kim J.S., Kim K.H., RA Cha B.J.; RT ; RL Submitted (17-DEC-2009) to the INSDC. RL Agricultural Microbiology Division, National Academy of Agricultural RL Science, Seodun-dong, 150. Kweonseon-Gu, Suwon, GyeongGi-do 441-707, RL Republic of Korea XX DR MD5; 7ab5dee5723fa983fed2049272f1b57d. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers GU327366-GU327368 represent the complete CC genome of Cucumber mosaic virus strain Z1. XX FH Key Location/Qualifiers FH FT source 1..3050 FT /organism="Cucumber mosaic virus" FT /segment="RNA-2" FT /host="Cucurbita pepo" FT /strain="Z1" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2004" FT /note="subgroup: 1A" FT /db_xref="taxon:12305" FT gene 87..2663 FT /locus_tag="CMVRNA22a" FT CDS 87..2660 FT /codon_start=1 FT /locus_tag="CMVRNA22a" FT /product="RNA-dependent RNA polymerase" FT /note="2a" FT /db_xref="GOA:D3JXL7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D3JXL7" FT /protein_id="ADC32114.1" FT /translation="MASPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIATPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRPT FT GDAFTYFGNTIVTMAEFAWCYDTHQFEKLLFSGDDSLGFSLLPPVGDPSKFPTLFNMET FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERINSNKQRKKYGIERRCNDKRRTPTGSYVGGEETETKVSQTESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVMPPCERGGVTRA" FT gene 2419..2751 FT /locus_tag="CMVRNA22b" FT CDS 2419..2751 FT /codon_start=1 FT /locus_tag="CMVRNA22b" FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:D3JXL8" FT /protein_id="ADC32115.1" FT /translation="MELNVGAMTNVELQLARMLEVKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHANVAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3050 BP; 771 A; 689 C; 702 G; 888 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagaactt 60 taaaacttct ttctagtatc ttttctatgg cttcccctgc ccccgcattc tcactagcca 120 atcttttgaa cggcagttac ggtgtcgaca ctcccgagga tgtggaacgc ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaattacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgcgcatt ccctccgaac tcctgacgga gctcccgctg 300 aagcggtgtc tgatgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tgtcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccctgcgtt taataaatgt tcttttattt ccagcattgc tatggccaga gctttgttgt 480 tggcacctag aacatcccac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctac tacagtgaag agtgtgaagc tgacgacgct cagatagata 600 tctcgtctcg cgatgtaccc ggttattctt tcgaaccgtg gtcccgaacg tctggattcg 660 aaccgccgcc catttgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgttttgatt 720 tcaatgcttt aaagaaatcg tgcgctgaga ggactttcgc tgatgattat gttattgaag 780 gtttagacgg tgttgttgat aatgcgactt tgttgtcgaa tttgggtcca tttttggtgc 840 ccgtgaagtg tcaatatgaa aaatgtccaa caccaactat cgcgactcct ccggatttaa 900 atcgtgctac tgatcgtgtt gatatcaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taattacgac gactcttttc atcaagtgtt cgtcgaaagt gcagactatt 1020 ctatagatct ggatcatgtt agacttcgcc agtctgatct tatcgcaaaa attccagatt 1080 cagggcatat gataccggtt ctgaacaccg ggagcggtca caagagagta ggtacaacga 1140 aggaggttct tacagcaatt aagaaacgta atgctgacgt tccagagcta ggtgattccg 1200 ttaatctgtc tagattgagt aaagctgtgg ctgagagatt cttcatttca tacatcaatg 1260 gtaactcttt agcatccagt aactttgtca atgtcgttag taatttccac gattacatgg 1320 aaaagtggaa gtcctcaggt ctttcttatg atgatcttcc ggatcttcat gctgagaatt 1380 tgcagtttta tgatcacatg ataaaatccg atgtgaaacc tgtggtgagc gacacactca 1440 atatcgacag accggttcca gctactataa cgtatcataa gaagagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgccttcga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg gtttgacgtc aaaaacaaac 1620 actgcctcga gattgatctg tctaagtttg ataagtctca aggtgaattt catttgctaa 1680 ttcaggaaca cattttgaat ggtctaggat gtccagctcc gataactaag tggtggtgtg 1740 atttccaccg attttcttac atcagagacc gtagagctgg tgttggtatg cctattagtt 1800 tccagagacc aactggtgat gcattcactt attttggcaa taccattgtc accatggctg 1860 agtttgcctg gtgttatgac acccaccaat tcgaaaagct tttattctca ggcgatgatt 1920 ctctaggatt ttccctgctt ccccctgttg gggacccgag taaattccca actcttttca 1980 acatggaaac taaggtgatg gaacctgcgg taccatatat ttgctcgaag ttcctactct 2040 ctgacgagtt cggtaataca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gcacaaagaa gattccctat tctgacaatg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg attgaagttt ttggaccgaa tgtctcagtc gtgtatcgat caactttcga 2220 ttttcttcga attgaaatac aagaagtctg gggaagaggc tgctttaatg ttaggcgcct 2280 ttaagaagta taccgctaat ttccagtcct acaaagaact ctattattca gatcgtcgtc 2340 agtgcgaatt gatcaattcg ttttgtagta cagagttcag ggttgagcgt ataaattcca 2400 ataaacagcg aaagaaatat ggaattgaac gtaggtgcaa tgacaaacgt cgaactccaa 2460 ctggctcgta tgttggaggt gaagaaacag agacgaaggt ctcacaaaca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagact gttccgcttc 2580 ctaccgttct atcaagtaga tggttcggaa ctgacagggt catgccgcca tgcgaacgtg 2640 gcggagttac ccgagcctga ggcctctcgt ttagagttat cggcggagga ccatgatttc 2700 gacgatacag attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcatct ccctccggtt ttctgtggcg ggagctgagt tggcagtatt gctataaact 2820 gtctgaagtc actaaacaca ttgtggtgaa cgggttgtcc atccagctta cggctaaaat 2880 ggtcagtcgt agagaaatct acgccagcag acttacaagt ctctgaggca cctttgaaac 2940 catctcctag gtttcttcgg aaggacttcg gtccgtgtac ttctagcaca acgtgctagt 3000 ttcagggtac aggtgccccc ccactttcgt ggggcctcca aaggagacca 3050 //