ID GU327366; SV 1; linear; genomic RNA; STD; VRL; 3359 BP. XX AC GU327366; XX DT 08-FEB-2010 (Rel. 103, Created) DT 08-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE Cucumber mosaic virus strain Z1 segment RNA-1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3359 RA Kim M.K., Choi H.S., Kwak H.R., Ko S.J., Lee S.H., Kim J.S., Kim K.H., RA Cha B.J.; RT ; RL Submitted (17-DEC-2009) to the INSDC. RL Agricultural Microbiology Division, National Academy of Agricultural RL Science, Seodun-dong, 150. Kweonseon-Gu, Suwon, GyeongGi-do 441-707, RL Republic of Korea XX DR MD5; a16432df192bc87a3eac79eba389fdc8. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers GU327366-GU327368 represent the complete CC genome of Cucumber mosaic virus strain Z1. XX FH Key Location/Qualifiers FH FT source 1..3359 FT /organism="Cucumber mosaic virus" FT /segment="RNA-1" FT /host="Cucurbita pepo" FT /strain="Z1" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2004" FT /note="subgroup: 1A" FT /db_xref="taxon:12305" FT gene 95..3076 FT /locus_tag="CMVRNA11a" FT CDS 95..3076 FT /codon_start=1 FT /locus_tag="CMVRNA11a" FT /product="replicase" FT /note="1a" FT /db_xref="GOA:D3JXL6" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:D3JXL6" FT /protein_id="ADC32113.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTQPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIRSAFSETEDVTPLVGKLNSTVFSRVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKRAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHTLFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVDEGSDSPEEPSSTPDDTADVCGKEQEISELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVHSVVYNERGLCRKSDGELFIVNRECVICNSEF FT LSAVTRSLQAPTGTISQVDGVACCGKTTAIKSIFEPSTDMIVTADKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRAITTVTLVDLDPSRFYITMTQADKASLISRAKEMNLPKDFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3359 BP; 854 A; 738 C; 817 G; 950 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 acttctctct cttaatcttt tctttgtaat tcctatggcg acgtcctcgt tcaacatcaa 120 tgaattggta gcctcccacg gcgataaagg actactcgcg accgccctcg ttgataagac 180 agctcatgag cagcttgagg agcaattaca gcatcaacgt aggggccgta aggtctacat 240 ccgaaacgtt ttgggtgtaa aggattccga ggtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacataacg tacactgctg 480 ttccccttgt ttgggtatcc gcgataagat gcgccatgcg gaacgtttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggatt tttgcactca 600 accggctgcg gattgcaaag tacaagccca ctttgcgata tctattcatg gaggttatga 660 tatgggcttt agaggattat gtgaagcgat gaatgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggtg cgatgatgtt tgacgatcaa ggtataatac ccgaacttaa 780 ttgtcagtgg aggaagatca ggagtgcttt ctccgaaact gaagacgtca caccactggt 840 tggtaagctt aattccacag ttttctcccg cgtgcggaag ttcaagacga tggtagcttt 900 tgatttcatc aatgagtcta ctatgtctta tgttcatgat tgggagaata taaaatcttt 960 tcttacggac cagacttatt cgtaccgagg gatgacttac ggtattgaac gctgcgttat 1020 tcacgctggt atcatgacgt acaagattat cggcgtacct gggatgtgcc cacccgagct 1080 cattcgacat tgtatttggt tcccctctat taaagactat gttggtctaa agattcccgc 1140 gtcgcaggat ttggttgagt ggaaaacagt gcggatttta acgtcaacgt tacgtgagac 1200 tgaagagatt gccatgaggt gttataatga taagagagcg tggatggaac aattcaaggt 1260 tatcctaggt gttctatccg cgaaatcatc taccattgtt attaatggta tgtccatgca 1320 atctggtgag cgtatagata ttaacgatta ccattatatt ggtttcgcta ttcttctgca 1380 cacaaaaatg aaatatgaac aactgggaaa aatgtatgat atgtggaatg cttcgagcat 1440 atcgaagtgg tttgcagcgt tgactcgacc gctgcgtgtg tttttctcca gtgttgttca 1500 cacgctgttc ccgactttga gaccccgcga ggaaaaagaa ttcctgatca agctctccac 1560 cttcgtaact tttaatgaag agtgctcatt tgacggtgga gaggaatggg acgtgatatc 1620 atctgctgca tacgttgcta cacaggctgt tactgatggg aaagttttgg ctgcgcagaa 1680 agccgagaag ctcgctgaaa agcttgcaca acccgtagat gagggatcag acagccctga 1740 ggagccatct tcaactcctg atgatactgc cgatgtttgt ggaaaggagc aagaaatttc 1800 ggaacttgac tcattgtcgg ctcagacacg ttcccccatc actagagttg ctgaaagggc 1860 tactgccatg ctggagtacg ccgcttatga gaaacagcta cacgacacca cagtgtctaa 1920 tttgaaacgt atttggaata tggcgggcgg tgatgacaag agaaactccc tcgagggtaa 1980 tttgaagttt gtttttgaca cgtatttcac tgtcgacccc atggtgaata ttcacttttc 2040 gacgggtcgg tggatgcgtc ctgtgcctga gggaattgtc cactctgttg tttataatga 2100 acgcggttta tgtcggaagt ctgatggaga gcttttcata gtcaatagag aatgcgtgat 2160 atgtaatagc gagttcttat ctgctgtcac gcgttctctc caagctccaa ctggaaccat 2220 cagtcaagtc gacggagtcg cctgttgtgg gaaaactacg gcaattaaat ccatttttga 2280 gccgtccact gacatgatcg ttaccgcgga taagaagtcc gctcaagatg tgcgtatggc 2340 acttttcaaa tcgtcagact ctaaggaagc atgcaccttt gttcgaacag ccgattccgt 2400 cctacttaat gaatgtccga ctgtgagtag ggttttggtt gatgaggtcg tattgctaca 2460 ttttggtcaa ctgtgtgctg tcatgtctaa actgaaagct gtgcgagcta tatgttttgg 2520 ggattcggag cagattgctt tttcttctcg agatgcttcg tttgacatgc gtttctctaa 2580 gatcattcct gatgagacta gtgatgcgga cactacattc cgtagtccac aagacgtcgt 2640 gccgcttgtg cgtttaatgg ctacgaaggc ccttccgaaa ggaactcatt caaaatacac 2700 gaaatgggtt tctcaatcta aagtgaagag atctgtcaca tctcgcgcta tcactactgt 2760 gacattggtt gacttggatc catccaggtt ttacattaca atgactcagg ctgataaggc 2820 ttcactgatt tcaagggcga aagagatgaa cttaccaaag gatttctgga atgaaaggat 2880 taaaaccgta catgaatctc aaggtatttc tgaagaccac gttactttgg taagattaaa 2940 gagtacaaaa tgtgacctgt ttaaacagtt ttcttattgt ctcgttgcac tgactagaca 3000 caaggtcacg ttccgctacg agtactgtgg tgtattgaac ggcgatttaa tcgccgaatg 3060 tgttgctcgt gcttagcggc ctccctcctt cgggcgggat ctgagttggc ggtaatctac 3120 aaaccgtctg aagtcactaa acacatcgtg tggtgaacgg gttgtccatc cagctaacgg 3180 ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggcacct 3240 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc tagcacaacg 3300 tgctagtttc agggtacggg tgccccccca ctttcgtggg ggcctccaaa aggagacca 3359 //