ID   GU327365; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   GU327365;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   08-FEB-2010 (Rel. 103, Last updated, Version 1)
XX
DE   Cucumber mosaic virus strain Rb segment RNA-3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2214
RA   Kim M.K., Choi H.S., Kwak H.R., Ko S.J., Lee S.H., Kim J.S., Kim K.H.,
RA   Cha B.J.;
RT   ;
RL   Submitted (17-DEC-2009) to the INSDC.
RL   Agricultural Microbiology Division, National Academy of Agricultural
RL   Science, Seodun-dong, 150. Kweonseon-Gu, Suwon, GyeongGi-do 441-707,
RL   Republic of Korea
XX
DR   MD5; 82a58fb54d1dfb2f46f701b36b082728.
DR   RFAM; RF01084; TLS-PK3.
XX
CC   GenBank Accession Numbers GU327363-GU327365 represent the complete
CC   genome of Cucumber mosaic virus strain Rb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA-3"
FT                   /host="Rudbeckia hirta var. pulcherrima"
FT                   /strain="Rb"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2005"
FT                   /note="subgroup: 1"
FT                   /db_xref="taxon:12305"
FT   gene            120..959
FT                   /locus_tag="CMVRbRNA3MP"
FT   CDS             120..959
FT                   /codon_start=1
FT                   /locus_tag="CMVRbRNA3MP"
FT                   /product="movement protein"
FT                   /note="MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:D3JXL4"
FT                   /protein_id="ADC32111.1"
FT                   /translation="MALQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   gene            1257..1913
FT                   /locus_tag="CMVRbRNA3CP"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /locus_tag="CMVRbRNA3CP"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:D3JXL5"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:D3JXL5"
FT                   /protein_id="ADC32112.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2214 BP; 517 A; 527 C; 527 G; 643 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgctgtc cgcacatttg        60
     agtcgtgctg tccgcacatt ttcttttatc tttgtacagt gtgttagatt tcccgaggca       120
     tggctctcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccatcaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgtgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaagtctgg atatgatgtt ggtgaattat       360
     gctcaaaagg atacatgagc gtccctcagg tgttgtgtgc tgttactcga acagtttcca       420
     ccgatgctga agggtccttg agaatttact tagctgatct aggcgacaag gagttatctc       480
     ctatagatgg gcaatgcgtc tcattacata accatgatct tcccgcttta gtgtctttcc       540
     aaccgacgta tgattgtcct atggaaacag ttgggaatcg taagcggtgt tttgctgtcg       600
     ttatcgaaag acatggttat attgggtata ccggcaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcatct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactccc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca attgaacaac attgaatctt cgcaatactt gttaacgaac gcgaagatca       840
     atcagaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattggtat ataagtatgt gtgagtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcacag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta atcgtcgacg tcgtccgcgt cgtggttccc      1320
     gctccgcccc ctcctccgcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaataagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     aacgctgtag acctggatac acgttcacat ctattaccct aaagccacca aaaatagacc      1500
     gcgggtctta ttacggtaaa aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttaccgcc atctctgcta      1680
     tgtttgcgga cggagcctca ccggtactgg tttatcagta tgccgcatct ggagtccaag      1740
     ctaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatataggt gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ctagtacttc      1860
     atgttgacat cgagcaccaa cgcattccca cgtctggggt gctcccagtc tgattccgtg      1920
     tttccagaat cctccctccg atttctgtgg cgggagctga gttggcagtt ctgctataaa      1980
     ctgtctgaag tcactaaacg ttttacggtg aacgggttgt ccatccagct tacggctaaa      2040
     atggtcagtc gtggagaaat ctacgccagc agatttacaa atctctgagg cgcctttgaa      2100
     accatctcct aggtttcttc ggaaggactt cggtccgtgt acctctagca caacgtgcta      2160
     gtttcagggt acgggtgccc ccccattttc atgggggcct ccaaaaggag acca            2214
//