ID GU327364; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC GU327364; XX DT 08-FEB-2010 (Rel. 103, Created) DT 08-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE Cucumber mosaic virus strain Rb segment RNA-2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RA Kim M.K., Choi H.S., Kwak H.R., Ko S.J., Lee S.H., Kim J.S., Kim K.H., RA Cha B.J.; RT ; RL Submitted (17-DEC-2009) to the INSDC. RL Agricultural Microbiology Division, National Academy of Agricultural RL Science, Seodun-dong, 150. Kweonseon-Gu, Suwon, GyeongGi-do 441-707, RL Republic of Korea XX DR MD5; 8957bf1ca731f4f8a3b4c012fa11a7ef. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers GU327363-GU327365 represent the complete CC genome of Cucumber mosaic virus strain Rb. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus" FT /segment="RNA-2" FT /host="Rudbeckia hirta var. pulcherrima" FT /strain="Rb" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2005" FT /note="subgroup: 1" FT /db_xref="taxon:12305" FT gene 87..2660 FT /locus_tag="CMVRbRNA22a" FT CDS 87..2660 FT /codon_start=1 FT /locus_tag="CMVRbRNA22a" FT /product="RNA-dependent RNA polymerase" FT /note="2a" FT /db_xref="GOA:D3JXL2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D3JXL2" FT /protein_id="ADC32109.1" FT /translation="MASPAPTFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALPLAPRASNRTMKCFEDLVAAIYTKSDFYYGEEC FT EAHDVQIDISSRDVPRYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTLAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSHGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSSKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKISQAESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVEPPCERGGVTRA" FT gene 2419..2751 FT /locus_tag="CMVRbRNA22b" FT CDS 2419..2751 FT /codon_start=1 FT /locus_tag="CMVRbRNA22b" FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q96712" FT /protein_id="ADC32110.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSSRHVNVAELPEPEASRLELSAEDHEFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3049 BP; 769 A; 684 C; 713 G; 883 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttg 60 aaaactttct ttctagtatc ttttctatgg cttcccctgc ccccacattc tcactagcca 120 atcttttgaa cggtagttac ggtgtcgaca ctcccgagga tgtggaacgt ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaactacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgcgcatt ccctccgaac tcctgacgga gctcccgctg 300 aggcggtgtc tgatgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tgtcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccccgcgtt taataaatgt tcttttattt ccagcattgc tatggccaga gctttgccgt 480 tggcacctag agcatccaac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctat tatggtgaag agtgtgaagc ccacgacgtt cagatagata 600 tctcgtctcg cgatgtaccc cgttattctt tcgaaccgtg gtcccgaacg tctggatttg 660 aaccgccgcc catttgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgttttgatt 720 tcaatgcttt gaagaaatcg tgcgctgaga ggactttcgc tgatgactat gttattgaag 780 gtttagatgg tgttgttgat aatgcgactc tgttgtcgaa tttgggtcca tttttggtac 840 ccgtgaagtg tcagtatgaa aaatgtccaa caccaaccct cgcgattcct ccggatttaa 900 atcgtgctac tgatcgtgtt gatattaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taattacgac gactcttttc atcaagtgtt tgtcgaaagt gcagactact 1020 ccatagatct ggatcatgtt agacttcgac agtctgatct tatcgcaaaa attccagatt 1080 cagggcatat gataccggtt ttgaacaccg ggagcggtca caagagagta ggtacaacga 1140 aggaggtcct tacagcaatt aagaaacgta atgctgacgt tccagagcta ggtgattccg 1200 ttaatctgtc tagattgagt aaagctgtgg ctgagagatt cttcatttca tacatcaatg 1260 gtaactctct agcgtccagt aactttgtca atgtcgttag taacttccac gattacatgg 1320 aaaaatggaa gtcctcaggt ctctcttatg atgatctccc agatcttcat gctgagaatt 1380 tgcagtttta tgatcacatg ataaaatctg atgtgaaacc tgtggtgagc gacacactca 1440 atatcgacag accggttccg gctactataa cgtatcataa gaagagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgccttcga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg atttgatgtc aaaaacaagc 1620 actgcctcga aattgatctg tctaagtttg ataaatctca cggtgaattc catttgctaa 1680 ttcaggaaca tattttgaat ggtctaggat gtccagctcc gataactaag tggtggtgtg 1740 attttcaccg attctcttac attagagatc gtagagctgg tgttggtatg cctattagtt 1800 tccagagacg aactggtgat gcattcactt attttggcaa taccattgtc accatggcgg 1860 agtttgcctg gtgttacgac accgaccaat tcgaaaagct tttattctcg ggcgatgact 1920 ctctaggatt ttcattgctt ccccctgttg gcgatccgag taaattcacg actcttttca 1980 acatggaagc taaggtgatg gaacctgcag taccatatat ttgttcgaag ttcttactct 2040 ctgacgagtt cggtaataca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gaacaaagaa aattccctat tctgacaatg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg attgaagttt ttggaccgaa tgtctcagtc gtgtatcgat cagctttcga 2220 ttttctttga attgaaatac aagaagtctg gggaagaggc tgctttaatg ttaggcgcct 2280 ttaagaaata taccgctaat tttcagtcct acaaggaact ctactattca gatcgtcgtc 2340 agtgcgaatt gatcaattcg ttttgtagta cagagttcag ggttgagcgt gtaaattcca 2400 gtaaacagcg aaagaaatat ggaattgaac gtaggtgcaa tgacaaacgt cgaactccaa 2460 ctggctcgta tggtggaggc gaagaagcag agacgaagat ctcacaagca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagact gttccgcttc 2580 ctaccgttct atcaagtaga tggttcggaa ctgacagggt cgagccgcca tgtgaacgtg 2640 gcggagttac ccgagcctga ggcctctcgt ttagagttat cggcggaaga ccatgagttt 2700 gacgatacgg attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcaact ccgccagtcc tgtggcggag ctgagttggc agtattgcta taaactgtct 2820 gaagtcacta aacacattgt ggtgaacggg ttgtccatcc agcttacggc taaaatggtc 2880 agtcgtagag aaatctacgc cagcagactt acaagtctct gaggcacctt tgaaaccatc 2940 tcctaggttt cttcggaagg actccggtcc gtgtacttct agcacaacgt gctagtttta 3000 gggtacgggt gcccccccca ctttcgtggg ggcctccaaa aggagacca 3049 //