ID   GU324109; SV 1; linear; genomic RNA; STD; VRL; 1366 BP.
XX
AC   GU324109;
XX
DT   08-SEP-2010 (Rel. 106, Created)
DT   08-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Suakwa aphid-borne yellows virus isolate SABYV-TW58 RdRp protein (RdRp),
DE   coat protein (CP), and MP protein (MP) genes, partial cds.
XX
KW   .
XX
OS   Suakwa aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1366
RX   DOI; 10.1111/j.1365-3059.2010.02327.x.
RX   AGRICOLA; IND44419733.
RA   Knierim D., Deng T.C., Tsai W.S., Green S.K., Kenyon L.;
RT   "Molecular identification of three distinct Polerovirus species and a
RT   recombinant Cucurbit aphid-borne yellows virus strain infecting cucurbit
RT   crops in Taiwan";
RL   Plant Pathol. 59(5):991-1002(2010).
XX
RN   [2]
RP   1-1366
RA   Knierim D., Deng T.C., Tsai W.S., Green S., Kenyon L.;
RT   ;
RL   Submitted (15-DEC-2009) to the INSDC.
RL   Virology, AVRDC - The World Vegetable Center, PO Box 42, Shanhua, Tainan
RL   74199, Taiwan
XX
DR   MD5; 792ddc2f3d216463c9691838074be245.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1366
FT                   /organism="Suakwa aphid-borne yellows virus"
FT                   /host="Momordica charantia (bittermelon)"
FT                   /isolate="SABYV-TW58"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan:Pingtung County"
FT                   /collection_date="24-Mar-2009"
FT                   /db_xref="taxon:646010"
FT   gene            <1..579
FT                   /gene="RdRp"
FT                   /note="ORF2"
FT   CDS             <1..579
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RdRp protein"
FT                   /db_xref="GOA:E0XKQ0"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKQ0"
FT                   /protein_id="ADM67510.1"
FT                   /translation="SVSSWMLEDDMEVRNNLTINNNELTRRLRACWLKCISNSVICLSD
FT                   GTLLAQEFPGIQKSGSYNTSSTNSRVRVMLSIYAGASWAIAMGDDALESADTIIPLYEQ
FT                   YGLKVEVSDKLEFCSHEFKSSSLAIPTNIGKMLYKLIHGYEIFPGMSSIQVTINYLTAC
FT                   YSVLNELRHVPEAASLVAQCLAPVEAQKV"
FT   gene            778..>1366
FT                   /gene="CP"
FT                   /note="ORF3"
FT   CDS             778..>1366
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:E0XKQ1"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKQ1"
FT                   /protein_id="ADM67511.1"
FT                   /translation="MNTVVVRNRNGMGRRRRNSRRNAKGNRVVVVQAPGAPQRGRRRRR
FT                   NGRRPSRGGRARGTSQGETFVFSKDNLTGSSSGAITFGPSLSDSPAFSSGILKAYHEYK
FT                   ISMVKLEFISEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKSGSRTWGAKFINGME
FT                   WHDATEDQFRILYKGNGSSSTAGSFRITIRCQV"
FT   gene            806..>1366
FT                   /gene="MP"
FT                   /note="ORF4"
FT   CDS             806..>1366
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="MP protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKQ2"
FT                   /protein_id="ADM67512.1"
FT                   /translation="MAWEEGEGIAGAMQKATAWLWSKPLGLHSAEDDDDETVDALLEEA
FT                   ELEEQAKAKHLYSAKTISRAVPLEQSRSGRLYQTAQHSALEYSRPTMSIKSQWLSWSSS
FT                   PRPLPPLPVPSLMSWTPIANLAPSNPRLINSVSRRVDHEHGALSSLTGWNGTTPQRISS
FT                   ESFTKETEAPRRRALLESPSGAKS"
XX
SQ   Sequence 1366 BP; 380 A; 342 C; 320 G; 324 T; 0 other;
     agcgtctcat cgtggatgct cgaagatgac atggaggtca ggaacaacct caccatcaac        60
     aacaacgagc tcaccaggcg ccttcgcgca tgctggttga agtgcatatc gaactctgtg       120
     atatgcctgt ccgatgggac tttgctagcc caggagttcc ccggtataca gaaatcgggc       180
     tcctataaca ccagctccac taactcaaga gttagagtga tgctctctat ttatgctggt       240
     gcatcctggg ctatagctat gggcgatgac gcccttgagt ccgctgatac gataatccca       300
     ttatatgagc aatacggact caaagtcgag gtctctgaca aactggaatt ttgttctcat       360
     gagttcaaaa gttcgagcct cgccatcccc acaaatatag ggaaaatgct ttacaaactc       420
     atacatggat atgagatctt cccggggatg tccagcattc aggtcacaat caattatttg       480
     actgcctgtt actcagttct aaatgaactg cgtcatgtac ctgaagctgc ttcacttgtc       540
     gcgcagtgcc tcgctccagt cgaggcacaa aaagtttaaa caaaagcgcg cgctcagaac       600
     tagccggaaa tacgttgttg caattgccgg aagttaaagt caactacaac ataggccaac       660
     cagatttcaa gtttttagca ggatttactt cgggcttcct gatagctgta ccaatttcag       720
     cacttggcct atatttgatc tacctaaaga tttctaaaca cgtgcaatca atagttaatg       780
     aatacggtcg tggttagaaa tcgaaatggc atgggaagaa ggagaaggaa tagccggcgc       840
     aatgcaaaag gcaaccgcgt ggttgtggtc caagcccctg gggctccaca gcgcggaaga       900
     cgacgacgac gaaacggtcg acgcccttct cgaggaggca gagctagagg aacaagccaa       960
     ggcgaaacat ttgtattcag caaagacaat ctcacgggca gttcctctgg agcaatcacg      1020
     ttcgggccgt ctttatcaga cagcccagca ttcagctctg gaatactcaa ggcctaccat      1080
     gagtataaaa tctcaatggt taagttggag ttcatctccg aggcctcttc cacctcttcc      1140
     ggttccatct cttatgagtt ggacccccat tgcaaactta gctccctcca atccacggtt      1200
     aataaattcg gtatcacgaa gagtggatca cgaacatggg gcgctaagtt cattaacggg      1260
     atggaatggc acgacgccac agaggatcag ttccgaatcc tttacaaagg aaacggaagc      1320
     tcctcgacgg cgggctcttt tagaatcacc atcaggtgcc aagtcc                     1366
//