ID   GU324102; SV 1; linear; genomic RNA; STD; VRL; 1360 BP.
XX
AC   GU324102;
XX
DT   08-SEP-2010 (Rel. 106, Created)
DT   08-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Cucurbit aphid-borne yellows virus isolate CABYV-R-TW82 RdRp protein
DE   (RdRp), coat protein (CP), and MP protein (MP) genes, partial cds.
XX
KW   .
XX
OS   Cucurbit aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1360
RX   DOI; 10.1111/j.1365-3059.2010.02327.x.
RX   AGRICOLA; IND44419733.
RA   Knierim D., Deng T.C., Tsai W.S., Green S.K., Kenyon L.;
RT   "Molecular identification of three distinct Polerovirus species and a
RT   recombinant Cucurbit aphid-borne yellows virus strain infecting cucurbit
RT   crops in Taiwan";
RL   Plant Pathol. 59(5):991-1002(2010).
XX
RN   [2]
RP   1-1360
RA   Knierim D., Deng T.C., Tsai W.S., Green S., Kenyon L.;
RT   ;
RL   Submitted (15-DEC-2009) to the INSDC.
RL   Virology, AVRDC - The World Vegetable Center, PO Box 42, Shanhua, Tainan
RL   74199, Taiwan
XX
DR   MD5; cb54b6fc80dbf213179b322d27756ef2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Cucurbit aphid-borne yellows virus"
FT                   /host="Luffa aegyptiaca"
FT                   /isolate="CABYV-R-TW82"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan:Tainan County"
FT                   /collection_date="09-Jun-2009"
FT                   /db_xref="taxon:91753"
FT   gene            <1..576
FT                   /gene="RdRp"
FT                   /note="ORF2"
FT   CDS             <1..576
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RdRp protein"
FT                   /db_xref="GOA:E0XKM9"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKM9"
FT                   /protein_id="ADM67489.1"
FT                   /translation="SVSDWLLEDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSD
FT                   GTLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVGSNLAKYAE
FT                   LGFKVEVSSKLEFCSHIFEREDLAVPVNKAKMIYKLIHGYEPECGNAEVLINYLAACFS
FT                   VLNELRSDPQLVSTLHQWLVLPVQPQKI"
FT   gene            775..>1360
FT                   /gene="CP"
FT                   /note="ORF3"
FT   CDS             775..>1360
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:E0XKN0"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKN0"
FT                   /protein_id="ADM67490.1"
FT                   /translation="MNTAVARNQNAGRRRRRNQRPSRRNRVVVVNPIGGPPRGRRQRRN
FT                   RRRANRGGRARGGSPGETFVFSKDNLTGSSSGSITFGPSLSESPAFSSGILKAYHEYKI
FT                   IMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTINKFGITKNGLRRWTAKQINGMEW
FT                   HDATEDQFKILYKGNGSSSVAGSFRITIKCQV"
FT   gene            803..>1360
FT                   /gene="MP"
FT                   /note="ORF4"
FT   CDS             803..>1360
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="MP protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKN1"
FT                   /protein_id="ADM67491.1"
FT                   /translation="MQGGAGDEISALHGATAWLWSTRLGDHRAEDDNDETADALIEEAE
FT                   LEEEAQAKHSYFQRTISRAVPQEVSLSGRLFQRAQHSALEYSRPTMNIRSSWSSWSSSP
FT                   RPLPPPRVPSLMSWTPTASLAPSNPRLINLESPRMDCEDGQLSRLTGWNGTTQPRTNSR
FT                   SSTKGTDLPRLRAASESPSSVRS"
XX
SQ   Sequence 1360 BP; 366 A; 344 C; 335 G; 315 T; 0 other;
     agcgtttcgg actggctcct tgaagatgat atggaagtcc gaaaccgcct gacgctggac        60
     atcaatgaga ccaccaagcg cttgagatca gcttggttga agtgcatctc gaatagcgtc       120
     ctcagcctct ccgatgggac ccttctgtca cagcaggtcc ccggagtaca aaaatctggc       180
     agctacaata cctcatcctc caattctagg attcgagtga tggctgcata tcattgtggg       240
     gctgagtggg cgatggcaat gggcgatgac gccctcgagt cagtcggctc aaacctagcg       300
     aaatacgctg agctaggttt caaagtcgag gtttcttcaa aactggaatt ttgctcacat       360
     attttcgaac gtgaagacct cgccgttccg gtcaataaag ccaaaatgat atataagtta       420
     atacatggct atgaaccgga atgtggcaat gctgaggttc tgattaatta tctggccgcc       480
     tgtttttcag ttctcaatga attgcggtca gatcctcagc ttgtctcgac tctccatcag       540
     tggctggttc ttccagtgca gccacaaaag atataagggg agtataaaga acactagcca       600
     agcatacacg agttgcaagc gttggaagtc tagtctcgtt acaaagagtc cacacaatag       660
     actacaaatt tctcgcaggg ttttccagcg gtctattgtc cgcaatacct gtcacggtaa       720
     taggactcta ttttgtctac ctaaagattt cagcacacgt gcgagccatc gttaatgaat       780
     acggccgtgg ctagaaatca aaatgcaggg aggcgcaggc gacgaaatca gcgcccttca       840
     cggcgcaacc gcgtggttgt ggtcaacccg attgggggac caccgcgcgg aagacgacaa       900
     cgacgaaacc gccgacgcgc taatcgagga ggcagagcta gaggaggaag cccaggcgaa       960
     acattcgtat tttcaaagga caatctcacg ggcagttcct caggaagtat cactttcggg      1020
     ccgtctcttt cagagagccc agcattcagc tctggaatac tcaaggccta ccatgaatat      1080
     aagatcatca tggtccagct ggagttcatc tccgaggcct cttccacctc ctcgggttcc      1140
     atctcttatg agttggaccc ccactgcaag cttagctccc tccaatccac gattaataaa      1200
     tttggaatca ccaagaatgg attgcgaaga tggacagcta agcagattaa cgggatggaa      1260
     tggcacgacg caaccgagga ccaattcaag atcctctaca aagggaacgg atcttcctcg      1320
     gttgcgggca gcttcagaat caccatcaag tgtcaggtcc                            1360
//