ID   GU324100; SV 1; linear; genomic RNA; STD; VRL; 1361 BP.
XX
AC   GU324100;
XX
DT   08-SEP-2010 (Rel. 106, Created)
DT   08-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Cucurbit aphid-borne yellows virus isolate CABYV-C-TW58 RdRp protein
DE   (RdRp), coat protein (CP), and MP protein (MP) genes, partial cds.
XX
KW   .
XX
OS   Cucurbit aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1361
RX   DOI; 10.1111/j.1365-3059.2010.02327.x.
RX   AGRICOLA; IND44419733.
RA   Knierim D., Deng T.C., Tsai W.S., Green S.K., Kenyon L.;
RT   "Molecular identification of three distinct Polerovirus species and a
RT   recombinant Cucurbit aphid-borne yellows virus strain infecting cucurbit
RT   crops in Taiwan";
RL   Plant Pathol. 59(5):991-1002(2010).
XX
RN   [2]
RP   1-1361
RA   Knierim D., Deng T.C., Tsai W.S., Green S., Kenyon L.;
RT   ;
RL   Submitted (15-DEC-2009) to the INSDC.
RL   Virology, AVRDC - The World Vegetable Center, PO Box 42, Shanhua, Tainan
RL   74199, Taiwan
XX
DR   MD5; c335477031d7d7503fc63a13a3633152.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1361
FT                   /organism="Cucurbit aphid-borne yellows virus"
FT                   /host="Momordica charantia (bittermelon)"
FT                   /isolate="CABYV-C-TW58"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan:Pingtung County"
FT                   /collection_date="24-Mar-2009"
FT                   /db_xref="taxon:91753"
FT   gene            <1..576
FT                   /gene="RdRp"
FT                   /note="ORF2"
FT   CDS             <1..576
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RdRp protein"
FT                   /db_xref="GOA:E0XKM3"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKM3"
FT                   /protein_id="ADM67483.1"
FT                   /translation="SVSDWFLEDDMEVRNRLTLDLNDTTRRLRAGWLRCISNSVLCLSD
FT                   GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVSSSLDKYAS
FT                   LGFKVEESSKLEFCSHIFESEDLAIPVNKAKMLYKLIHGYEPECGNPEVLFNYLTACFA
FT                   VLNELRSDPQLVETLHRWLVLPVQPQKI"
FT   gene            776..>1361
FT                   /gene="CP"
FT                   /note="ORF3"
FT   CDS             776..>1361
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:E0XKM4"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKM4"
FT                   /protein_id="ADM67484.1"
FT                   /translation="MNTVAARNPNAGRRRRRNRRLARRDRVVVVNPIGGPPRGRRQRRN
FT                   RRRSNRGGRARGGSPGETFVFSKDNLAGSSSGSITFGPSLSESPAFSSGILKAYHEYKI
FT                   IMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKNGLRRWTAKQINGLEW
FT                   HDATEDQFKILYKGNGSSTVAGSFRITIKCQV"
FT   gene            804..>1361
FT                   /gene="MP"
FT                   /note="ORF4"
FT   CDS             804..>1361
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="MP protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:E0XKM5"
FT                   /protein_id="ADM67485.1"
FT                   /translation="MQGGEGEEIGALQGVTAWLWSTPLGDHRAEDDNEETADALIEEAE
FT                   LEEEARAKHLYFQRTISRAVPQEVSLSGRLFQRAQHSALEYSRPTMNIRSSWFSWSSSP
FT                   RPLPPPRVPSLMSWTPTASLAPSNPRLISLESPRMDCDGGQLSRLTGWNGTTQPRTSSR
FT                   SSTKGMDLPRLRAASESPSSARS"
XX
SQ   Sequence 1361 BP; 358 A; 337 C; 346 G; 320 T; 0 other;
     agcgtttcgg actggttcct tgaagatgat atggaagtcc gaaaccgcct gacgctcgat        60
     ctcaatgaca ccacccgccg ccttcgggct ggatggttga ggtgtatctc gaacagcgtc       120
     ctctgccttt ctgacggaac attattagcg cagagagtcc cgggcgtgca gaagagtggc       180
     agctacaaca cgtcatcgag caattcccga atcagggtga tggctgccta ccactgcggc       240
     gcagaatggg ctatggcgat gggcgatgat gcccttgagt cagtcagctc tagcctagac       300
     aaatatgcta gtctaggctt taaagtcgag gaatcttcaa aactggaatt ctgttcacac       360
     atttttgaat ctgaagacct cgccattccg gtcaacaaag ctaaaatgct ttacaagttg       420
     attcatggtt atgaaccgga atgtggcaac cctgaggtgt tatttaacta tttgaccgcc       480
     tgctttgcag ttttaaatga attgcggtcc gatcctcagt tggttgaaac tctccaccgg       540
     tggctggtcc ttccagtaca gccacaaaag atataagggg agtataaaga acactagccg       600
     agcacacacg agttgcaagc atcggaagtc tgagtctcgt taccaagagt ccaaacaata       660
     gattataagt ttctcgcagg attttcaagc ggtctattgt cagcaatacc catcacggtg       720
     attgggctct attttgtcta cctaaagatt tcagcccacg ttcgatcaat tgttaatgaa       780
     tacggtcgcg gctagaaatc caaatgcagg gaggcgaagg cgaagaaatc ggcgccttgc       840
     aaggcgtgac cgcgtggttg tggtcaaccc cattggggga ccaccgcgcg gaagacgaca       900
     acgaagaaac cgccgacgct ctaatagagg aggcagagct agaggaggaa gcccgggcga       960
     aacatttgta ttttcaaagg acaatctcgc gggcagttcc tcaggaagta tcactttcgg      1020
     gccgtctctt tcagagagcc cagcattcag ctctggaata ctcaaggcct accatgaata      1080
     taagatcatc atggttcagc tggagttcat ctccgaggcc tcttccacct cctcgggttc      1140
     catctcttat gagttggacc cccactgcaa gcttagctcc ctccaatcca cggttaataa      1200
     gtttggaatc accaagaatg gattgcgacg gtggacagct aagcagatta acgggttgga      1260
     atggcacgac gcaaccgagg accagttcaa gatcctctac aaagggaatg gatcttccac      1320
     ggttgcgggc agcttcagaa tcaccatcaa gtgccaggtc c                          1361
//