ID GU323321; SV 1; circular; genomic DNA; STD; VRL; 2735 BP. XX AC GU323321; XX DT 05-FEB-2010 (Rel. 103, Created) DT 28-JAN-2011 (Rel. 107, Last updated, Version 3) XX DE Horsegram yellow mosaic virus isolate LK:09 segment DNA-A, complete DE sequence. XX KW . XX OS Horsegram yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2735 RA Monger W.A., Harju V., Nixon T., Bennett S., Reeder R., Kelly P., RA Ariyarathne H.M.; RT "First report of Horsegram yellow mosaic virus infecting Phaseolus vulgaris RT in Sri Lanka"; RL New Dis. Rep. 21:16-16(2010). XX RN [2] RP 1-2735 RA Monger W.A.; RT ; RL Submitted (14-DEC-2009) to the INSDC. RL Novel Diagnostics, Food and Environment Research Agency, Sand Hutton, York RL YO41 1LZ, UK XX DR MD5; 25bd29d261fbcd39902cff7ab0d7e729. XX CC GenBank Accession Numbers GU323321-GU323322 represent the complete CC genome of Horsegram yellow mosaic virus isolate LK:09. XX FH Key Location/Qualifiers FH FT source 1..2735 FT /organism="Horsegram yellow mosaic virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="LK:09" FT /mol_type="genomic DNA" FT /country="Sri Lanka" FT /collection_date="2009" FT /db_xref="taxon:263793" FT CDS 145..495 FT /codon_start=1 FT /product="AV2" FT /note="cell to cell movement protein" FT /db_xref="GOA:D3JWB9" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:D3JWB9" FT /protein_id="ADB96022.1" FT /translation="MWDPLLNDFPKTVHGFRCMLAIKYLEHVQENYSTNSVGFVYLTEL FT IQLLRIRKHAKAELRYRLLYPGIQCSSETDLRHPPGAIGACGKCSCKCEKETVDQPPHV FT EETEILSVVSLS" FT CDS 305..1078 FT /codon_start=1 FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:D3JWC0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3JWC0" FT /protein_id="ADB96023.1" FT /translation="MPKRNYDTAFSTPGSSVRRRLTYDTPLALSAPAGSAPASVRRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSYEARHDISHVGKVICVTDVTRGSGLTH FT RVGKRFCVKSIFITGKIWMDENIKTKNHTNTVMFKLVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDFRDRYQVVRKFHATVTGGQYACKEQAIISRFYRVNNHVVYNHQEAGKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN" FT CDS complement(533..973) FT /codon_start=1 FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:D3JWC1" FT /protein_id="ADB96024.1" FT /translation="MIVILPGFLMIVNNMVINTIKSANNGLLLARILATGNGGMKLTHD FT LITITKIILHCGSTGFIIIHVKNLTKVLRRSIRTPITNQLEHHSVSVILGLDVFVHPNL FT SCNENGLNTKSFTDTMSKTTTTSHIRDTDDFAHMRDVMSRLI" FT CDS complement(1075..1479) FT /codon_start=1 FT /product="AC3" FT /note="replication enhancer protein" FT /db_xref="GOA:D3JWC2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3JWC2" FT /protein_id="ADB96025.1" FT /translation="MDFRTGDNITAAQLRNGVYIWEVRNPLSFKILQHRPMGAGSRMIV FT TQIRLMFNHGLKKALQMHKCFLDLKLYHYMTATSGMILSIFRNQLFRYLNNLGVISVGN FT VLSGASHILYEKLHLVEDVSFTHNVQYKLY" FT CDS complement(1220..1627) FT /codon_start=1 FT /product="AC2" FT /note="transcriptional activation protein" FT /db_xref="GOA:D3JWC3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D3JWC3" FT /protein_id="ADB96026.1" FT /translation="MRNSTPSKNHSSPPSIKAQHRVAKKRAIRRSRIDLTCGCSYYIHI FT NCRNYGFSHRGQHHCSSTQEWRLYLGGAKSPLFQDPSTSSNGSRVPNDRDPNPPNVQPR FT TEESIANAQMLPRPETVPLYDGDFWDDIINF" FT CDS complement(1527..2615) FT /codon_start=1 FT /product="AC1" FT /note="replication associated protein" FT /db_xref="GOA:D3JWC4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D3JWC4" FT /protein_id="ADB96027.1" FT /translation="MPRERRFAINAKNYFLTYPRCPLTKEDTLEQLLALSTPVNKRFIR FT ICRELHENGEPHLHVLLQFEGKFHTRNQRFFDLVSSTRSTHFHPNIQAAQSCSDVKQYM FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNCGSKSQALDILKEKAPKDYILQFH FT NLNCNLNKIFISPIQAYVSPYSIDTFDRVPHHISSWASENVRDPAARPERPISIVIEGD FT SRTGKTMWARALGPHNYLCGHLDLNDKIFSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTHIKGGIPTIFLCNPGPKSSYKEYLDETDNASLKVWASKNAEFYTLKEPL FT FSSVDQSATQGCQEASNSTLSN" FT CDS complement(2165..2458) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D3JWC5" FT /protein_id="ADB96028.1" FT /translation="MENLISMFCCNSKANSTHVTKGSSTWYPQPGQHISIRTFRQLKAA FT QMLSNTWRKTETSLIMEPSKSMEDRLEEVNSLQTTRMPRHSIVDQNHRPSIY" XX SQ Sequence 2735 BP; 696 A; 576 C; 634 G; 829 T; 0 other; acctgagtgc cccgcgatcg gttccactct gcttttgctt ttggaccgct ttacttttag 60 tcgttcaatg agaagcgctc ctcagcacta cgataattca aatttgaatt ataaagccag 120 gtgccacgtt gcatcgcact aaccatgtgg gatccattgt tgaacgactt tcccaaaaca 180 gtgcatggtt ttcgatgtat gcttgcaatt aagtacttgg agcatgttca agagaattat 240 tctactaatt ctgttggttt tgtgtatctt acagagctaa tacagttatt acgcattcgg 300 aaacatgcca aagcggaatt acgataccgc cttctctacc ccgggatcca gtgttcgtcg 360 gagactgacc tacgacaccc ccctggcgct atcggcgcct gcgggaagtg ctcctgcaag 420 tgtgagaagg agacggtgga ccaaccgccc catgtggagg aaaccgagat tttatcggtt 480 gtatcgctct cctgatgtcc cacgtggttg tgaaggaccg tgtaaggtcc aatcatatga 540 ggcgagacat gacatctcgc atgtgggcaa agtcatctgt gtcacggatg tgactcgtgg 600 tagtggtctt actcatcgtg tcggtaaacg attttgtgtt aagtccattt tcattacagg 660 aaagatttgg atggacgaaa acatcaagac caagaatcac actaacactg tgatgttcaa 720 gttggttcgt gataggcgtc cgtatggaac gcctcaggac tttggtcaag tttttaacat 780 gtatgataat gaacccagta ctgccacagt gaagaatgat tttcgtgatc gttatcaggt 840 cgtgcgtaag tttcatgcca ccgttaccgg tggccagtat gcgtgcaagg agcaagccat 900 tattagccga ttttatcgtg ttaataacca tgttgtttac aatcatcagg aagccgggaa 960 gtatgacaat catactgaga acgccttgtt attgtatatg gcatgtactc atgcttcaaa 1020 tcctgtgtat gcaactctta agattcggat ctatttttac gattcgatat caaattaata 1080 aagcttgtat tgaacattat gcgtaaagct tacatcctcc actaagtgga gtttttcata 1140 caggatatgt gaggcgccac ttaatacatt gcctacgcta atgacgccta gattatttaa 1200 atatctaaat aattggttcc taaaaattga taatatcatc ccagaagtcg ccgtcatata 1260 gtggtacagt ttcaggtcga ggaagcattt gtgcatttgc aatgctttct tcagtccgtg 1320 gttgaacatt aggcggattt gggtcacgat cattcgggac cctgctccca ttggacgatg 1380 ttgaaggatc ttgaaagaga ggggatttcg cacctcccag atatagacgc cattcctgag 1440 ttgagctgca gtgatgttgt ccccggtgcg aaaatccata gttgcgacag ttgatgtgaa 1500 tgtagtagct acacccacag gttaagtcaa ttcgagagcg tcgaattgct cgcttcttgg 1560 caaccctgtg ttgcgctttg atcgacggag gagaagagtg gttctttgag ggtgtagaat 1620 tccgcatttt tcgaagccca cacctttagc gatgcattat cggtctcgtc caagtactct 1680 ttataagagg atttggggcc tgggttacag agaaagatgg tggggattcc acctttaatg 1740 tgtgtgggct ttccgtattt tacatttgac tgccagtctc tttgcgcgcc catgaattct 1800 ttgaaatgtt tcaaataatg tggatcgacg tcatcgatga cgttatacca tgcctcgttg 1860 gagaagatct tatcgttcag atccaaatgg ccgcaaagat aattgtgagg acccaatgct 1920 cttgcccaca tggttttacc cgtccgacta tcaccttcaa ttactatact tatgggtctc 1980 tccggccgcg cagcgggatc ccttacattt tctgaagccc atgaagaaat atgatgtgga 2040 actctatcaa atgtatctat actataaggc gacacatatg cctggatagg cgaaatgaaa 2100 atcttattta aattacaatt taaattatga aattgtaaaa tataatcctt tggagccttc 2160 tccttcaata tatcgagggc ctgtgatttt gatccacaat tgagtgcctc ggcatacgcg 2220 tcgtttgcag actgtttacc tcctctagcc gatcttccat cgatttggaa ggttccatga 2280 tcaaggacgt ctccgtcttt ctccatgtat tgcttaacat ctgagcagct ttgagctgcc 2340 tgaatgttcg gatggaaatg tgttgacctg gttgaggata ccaggtcgaa gaacctttgg 2400 ttacgtgtgt ggaatttgcc ttcgaattgc agcagaacat ggagatgagg ttctccattc 2460 tcgtggagct ctcgacagat gcgaatgaat cttttgttaa ctggtgttga taaagctaat 2520 agttgctcca gtgtgtcctc tttagttaga ggacagcgag gatatgtaag gaaatagttt 2580 ttagcgttta ttgcaaaacg acgctctctt ggcatttttg aggtcgtttt tgtatcggtt 2640 gtccaccgat tctcatttac tcctgtcaat cggtgaacgg tgacgcatat atagtagagc 2700 tactaatccc ccaaggggca ctcagcaata atatt 2735 //