ID GU322424; SV 2; circular; genomic DNA; STD; VRL; 2781 BP. XX AC GU322424; XX DT 28-JAN-2010 (Rel. 103, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 3) XX DE Tomato yellow leaf curl virus - Wailuku, complete genome. XX KW . XX OS Tomato yellow leaf curl virus - Wailuku OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1094/PDIS-94-5-0641B. RX AGRICOLA; IND44357795. RA Melzer M.J., Ogata D.Y., Fukuda S.K., Shimabuku R., Borth W.B., RA Sether D.M., Hu J.S.; RT "First Report of Tomato yellow leaf curl virus in Hawaii"; RL Plant Dis. 94(5):641-641(2010). XX RN [2] RP 1-2781 RA Melzer M.J., Hu J.S.; RT ; RL Submitted (14-DEC-2009) to the INSDC. RL Plant and Environmental Protection Sciences, University of Hawaii, 3190 RL Maile Way, St. John 310, Honolulu, HI 96822, USA XX RN [3] RC Sequence update by submitter RP 1-2781 RA Melzer M.J., Ogata D.Y., Fukuda S.K., Shimabuku R., Borth W.B., RA Sether D.M., Hu J.S.; RT ; RL Submitted (02-AUG-2010) to the INSDC. RL Plant and Environmental Protection Sciences, University of Hawaii, 3190 RL Maile Way, St. John 310, Honolulu, HI 96822, USA XX DR MD5; 610fb10b9fdb5b03661b66c999406604. XX CC On Aug 2, 2010 this sequence version replaced gi:284444106. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus - Wailuku" FT /host="Lycopersicon esculentum" FT /isolate="Wailuku" FT /mol_type="genomic DNA" FT /country="USA:Hawaii" FT /collection_date="Nov-2009" FT /db_xref="taxon:710225" FT gene 148..498 FT /gene="V1" FT CDS 148..498 FT /codon_start=1 FT /gene="V1" FT /product="movement protein" FT /db_xref="GOA:D3JW79" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3JW79" FT /protein_id="ADB85777.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="V2" FT CDS 308..1084 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:D3JW80" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3JW80" FT /protein_id="ADB85778.2" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVCMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="C3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:D9YZT9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D9YZT9" FT /protein_id="ADK93995.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIIFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1226..1633) FT /gene="C2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:D9YZU0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D9YZU0" FT /protein_id="ADK93996.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT SCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDNIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="C1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:D3JW77" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D3JW77" FT /protein_id="ADB85779.2" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSSDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFT FT SFNQGPTQDSQEETNKA" FT gene complement(2171..2464) FT /gene="C4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D3JW78" FT /protein_id="ADB85780.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAH FT QMSRPTWKKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 761 A; 528 C; 609 G; 883 T; 0 other; accggatggc cgcgcctttt cttattatgt ggtccccatg agggttccac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg tttatttgtc tttatatact 120 tggtccccaa gtagtttgtc ttgcactatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcaggccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggt ccatgtaaag tccagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attacccaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tgtatggatg aaaatattaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcacgta acttataatc atcaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tacattatta attgaaatta caccaagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaata ccttcctgat 1320 gttgtggttg aatattatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagctga 1500 tgtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg accttgattg aaacttgtga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatact acgttctcgg cgacccactc ttcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tgccatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttttcc acgtaggtct tgacatctga tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagggc ttcctcttta gagagagaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca attcaattca aaattcaaaa ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //