ID   GU322365; SV 1; linear; mRNA; STD; VRL; 1677 BP.
XX
AC   GU322365;
XX
DT   25-JAN-2010 (Rel. 103, Created)
DT   26-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Rice black streaked dwarf virus P10 mRNA, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RX   DOI; 10.1016/j.jviromet.2010.09.004.
RX   PUBMED; 20837064.
RA   Le D.T., Netsu O., Uehara-Ichiki T., Shimizu T., Choi I.R., Omura T.,
RA   Sasaya T.;
RT   "Molecular detection of nine rice viruses by a reverse-transcription
RT   loop-mediated isothermal amplification assay";
RL   J. Virol. Methods 170(1-2):90-93(2010).
XX
RN   [2]
RP   1-1677
RA   Le D.T., Sasaya T.;
RT   "Method for diagnosis of virus-infected rice plants";
RL   Unpublished.
XX
RN   [3]
RP   1-1677
RA   Le D.T.;
RT   ;
RL   Submitted (14-DEC-2009) to the INSDC.
RL   Research Team for Vector-borne Diseases, National Agriculture Research
RL   Center, Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan
XX
DR   MD5; 0e659e9400da5fabb610cadf65a9e735.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /mol_type="mRNA"
FT                   /country="China"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="P10"
FT                   /note="outer capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:D2Y4Q6"
FT                   /protein_id="ADB66741.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATNTSTTVKKVKIHFSVQYFDEFKVNGHEKSIVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHPQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 552 A; 305 C; 291 G; 529 T; 0 other;
     atggctgaca taagacttga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt aaacaaccga ccaacaatca ctctgttatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa gcaccccacg ttgcatcttc ccaaactacc       180
     gttaatttgt acattcgcaa acatttgttg acccgacttc atgatagact acaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagacc atattcgcag tttctttcaa       300
     aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagcga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtgc aaattgagac cttaactgaa ggaaacatta cgttgaagcc cttttccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggcaa aattccaggt       540
     ttagaagttc ataaattgtt agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttat       660
     gatttcaatt gtcctgcaag cactacagat gttacacatt acggtggtta tgaccaattt       720
     tcgcgtcaaa tgttcgaacg tttgaatctc ttttataata ttagtcttag cataattccc       780
     gtttcagctt tgaaaacagt tcatttattc gaaaaagaat taagtgtttt ggatgcagat       840
     aaatctttac tcgaacagac ttggagcgca gtagcgtcat ttgttgaaac ttggcaagtt       900
     aaatctaaag ttaaagctga tgatcccgat gaatacgaac tgaccagttt gtccactttg       960
     cgtactaatt acgatggtac ttctacttct agtcctttta cagataagaa attcattgac      1020
     tggtatatta agactttttc taagactgaa aaaggatcgt ctttacgtcg aaatgaatta      1080
     gaagagaaaa gtgccactaa tacttcaact acagtaaaga aggttaaaat tcatttctct      1140
     gttcaatatt ttgacgaatt taaagttaac ggacacgaaa aaagcattgt agttcaaact      1200
     cataaaggtg aaatgacact agattattat cgtaaaattg gtgaagtatt aagtgcgatt      1260
     tggaaacgcg gtaaatcttt ggctgtacct tgttttgatt acattaaact tggcgttgaa      1320
     aaagcttttc atttggcacc cgtaattatg aagaagtata acttgacgat cgacgacatt      1380
     atcaacttca ttgataaagg accttcctat ttggctaagt tggacaaaat tgatgattgg      1440
     tctttaattt caaagcttat tattaccagt gttttaccta acattattca agctgtttat      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc gaacaacttg      1560
     ttgaaatctg atagggacag gctattgaag aaggcacttt ccgccaacgt ttcttcttcc      1620
     aatacatcta gtcatgaaca tccacagaag atagtactaa acaaagtgac aagatga         1677
//