ID   GU256530; SV 1; circular; genomic DNA; STD; VRL; 2582 BP.
XX
AC   GU256530;
XX
DT   24-NOV-2010 (Rel. 106, Created)
DT   30-NOV-2010 (Rel. 107, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-A, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-A
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2582
RX   DOI; 10.1007/s00705-010-0763-4.
RX   PUBMED; 20734091.
RA   Thomas J.E., Parry J.N., Schwinghamer M.W., Dann E.K.;
RT   "Two novel mastreviruses from chickpea (Cicer arietinum) in Australia";
RL   Arch. Virol. 155(11):1777-1788(2010).
XX
RN   [2]
RP   1-2582
RA   Thomas J.E., Parry J.N., Schwinghamer M.W., Dann E.K.;
RT   ;
RL   Submitted (27-NOV-2009) to the INSDC.
RL   Horticulture and Forestry Science, Queensland Primary Industries and
RL   Fisheries, 80 Meiers Rd, Indooroopilly, Qld 4068, Australia
XX
DR   MD5; 2121c5e3a370d79477c0ee93067758d4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2582
FT                   /organism="Chickpea chlorosis virus-A"
FT                   /host="Cicer arietinum voucher DAR 76857"
FT                   /isolate="3455C"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:887825"
FT   CDS             124..432
FT                   /codon_start=1
FT                   /product="V2"
FT                   /note="movement protein"
FT                   /db_xref="GOA:E5DE80"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:E5DE80"
FT                   /protein_id="ADQ52685.1"
FT                   /translation="MLGAYYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYSLFLKDLILLLKAKKQRTTTEIGFGNTPGRPGSQPQQNVGPI"
FT   CDS             416..1180
FT                   /codon_start=1
FT                   /product="V1"
FT                   /note="coat protein"
FT                   /db_xref="GOA:E5DE81"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:E5DE81"
FT                   /protein_id="ADQ52684.1"
FT                   /translation="MSGRFKGQVYSRKRGRNAKAYQALGVKSQRELEQLVNQPGRPIGN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCYNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPGGGVTVRVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1336..1749,1851..2438))
FT                   /codon_start=1
FT                   /product="C1:C2"
FT                   /note="replication protein"
FT                   /db_xref="GOA:E5DE82"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:E5DE82"
FT                   /protein_id="ADQ52687.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLRMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNREPEQLQHRRNSLYICGPTRTGKTSWA
FT                   RSLGRHNYFNGGVDFTTYDINATYNIVDDIPFKFCPNWKQLVGSQKDFTVNPKYGKKKR
FT                   IKGGIPCIILVNNDDDWLLDMSSSQKEYFESNCKIHYMYSGETFIAPESSSH"
FT   CDS             complement(1548..2438)
FT                   /codon_start=1
FT                   /product="C1"
FT                   /note="RepA"
FT                   /db_xref="GOA:E5DE83"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:E5DE83"
FT                   /protein_id="ADQ52686.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLRMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQLVPERPAGPAVSADTTTSTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
FT   intron          complement(1750..1850)
XX
SQ   Sequence 2582 BP; 694 A; 481 C; 642 G; 765 T; 0 other;
     acccgcgagt gcccggcccc acgcgagcac gttagtgcga gcgatatcgc gaggaaaaag        60
     caaaaatcct cgtgaggata agttagtgct atataaaggt gatgtgacat aaaggtgtga       120
     aaaatgttag gcgcctacta tcaaatattc ccttctgagg aaaattactc ttatacccct       180
     gttcagacgc aggagtcttt ttctggcgcg aaagcaggtg attcatccga gcacgtattt       240
     tcgaaagtcg tcgttgcttt aattattatt cttttttcag tgggaatcat ttatcttgcc       300
     tattctttat ttttaaaaga tttgatatta ttattaaagg cgaaaaagca gaggacgacg       360
     actgagatag ggtttggtaa tacccctggt agacccggtt ctcaacctca gcaaaatgtc       420
     gggccgattt aagggacaag tgtacagcag gaaaaggggt cgtaatgcaa aggcgtatca       480
     ggctctggga gttaaatctc aacgggagtt ggagcagtta gttaaccaac caggacgtcc       540
     tattggtaat aggcgtccgt cactgcaggt cgcagagtat ctgtggacga ccaacaaggc       600
     tggtgtgacg ttctcgcctg gtgggggaac ttatttgttc actaattacc ctcaaggggc       660
     gaacgagaac tgcaggcaca ctaaccggac cataacgtac aagatggcta tcaagtgttg       720
     ggttgccttg gatgggtcta tggtggctag ggttgcaaag tttccagtcc acttctggtt       780
     agtgtacgac aagaaccctg gtgatacgaa tccttctcca tcggctattt ttgatagtct       840
     ctatcaagat cagcctggga cttggactgt aacgaggaat gtgtgtcata ggtttgtcgt       900
     taaaaagtct tggtccgtga tgctggagtc taatgggatt gatcccagta agtctcagtc       960
     cacatcatat tatgggcctg ggccttgtta taattggagg cacatgacca aattttttaa      1020
     acgtttagga gttagtactg agtggaagaa ttcttccact ggtgatgttg ctgatattaa      1080
     ggaaggagca ctataccttg tatgtgctcc tggtggtggt gttactgtaa gagttggcgg      1140
     tagattccgc atgtatttca aatccgttgg caatcaataa aaatgttgtt attttgattt      1200
     catattaatg agcttcagtg tagagaaatt caaatcgtat taataaaaac ccggaataca      1260
     aaaacacacg aaaaggaaaa aaagacacct tacaataatt acactctata taccctccta      1320
     tgaggagagg cacgttcagt gactcgacga ttcaggagca ataaatgtct cgccgctata      1380
     catataatgg atcttgcagt tggattcaaa gtattccttc tgagaggaag acatatctaa      1440
     taaccagtcg tcgtcattat taactaatat aatacatggt attccccctt tgatcctctt      1500
     ctttttgccg tattttggat ttacggtgaa gtccttctgg gaacccacta gttgcttcca      1560
     gtttgggcag aacttgaagg ggatgtcgtc gacgatattg taggtggcgt taatgtcgta      1620
     cgtggtgaag tccactcctc cgttgaagta gttgtgtctg ccgagactgc gggcccagct      1680
     ggtctttccg gtacgagttg gtccgcagat gtagagggag ttccttcggt gttggagttg      1740
     ttcgggttcc tggtaaaatg atccatccat atcaaatctt cagttgctgt ttggtaattg      1800
     atatttggat gaattaaagt gtaagcatcg acgcttacca cgtacaggtc tctgttcagc      1860
     cactcctgta tttcttcgtg gcactgaaga tcaatggggg agaaggggtt ttcatatgga      1920
     ggctctatat ctgggaacag tttattggcg ctatattcaa gccattgtag tttggtcgcc      1980
     cattcatgag ggaactgatc cctaatcatt ctcaaatact cctccttagt tgttgcagtc      2040
     tggataatag ttcgccatcg ttcatcatgt ttagttgggg agaccttgtg ttttcgaaag      2100
     tctcctctcg tgatgacgtt tccatccttt gatatgtaat caaggacttg ttcagaattt      2160
     ttagctggtt ggatatttgg atggtttcct tcaaaatcaa aaaaagaagg gtcacgtata      2220
     tcccctcttt tatcaagctg aagaagacag tgaagatggg gagtaccatc ttgatggagc      2280
     tcagtagcaa cagcaataaa gaaaatagca aaacgtgaga gtttttccca gagaaagtct      2340
     ctgaggcttg ttgcagtaga gctgcaatgg ggataagtaa gaaaaacata tttggtttgt      2400
     agacggaagt tgttttgtcg ttttgaagaa gaaggcatta tttaggcttt cctcaaacag      2460
     tgttttgcaa actctatctt aaccagcgag tgaggaaaat gaggaagggg agtgaggtat      2520
     ttatttgaat ggagggcgaa tagcccgctg acacgtgggg cgcactcgcg gaatttaatg      2580
     tt                                                                     2582
//