ID GU214706; SV 1; linear; genomic DNA; STD; VRL; 4615 BP. XX AC GU214706; XX DT 08-MAR-2010 (Rel. 104, Created) DT 08-MAR-2010 (Rel. 104, Last updated, Version 1) XX DE Turkey parvovirus 260, complete genome. XX KW . XX OS Turkey parvovirus 260 OC Viruses; Parvoviridae; Parvovirinae; Aveparvovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-4615 RX DOI; 10.1016/j.virol.2009.12.027. RX PUBMED; 20097398. RA Day J.M., Zsak L.; RT "Determination and analysis of the full-length chicken parvovirus genome"; RL Virology 399(1):59-64(2010). XX RN [2] RP 1-4615 RA Day J.M., Zsak L.; RT ; RL Submitted (18-NOV-2009) to the INSDC. RL Southeast Poultry Research Laboratory, United States Department of RL Agriculture, 934 College Station Road, Athens, GA 30605, USA XX DR MD5; ac7cd40d73e3bab0f81621f451466a88. DR EuropePMC; PMC3457093; 22904047. DR EuropePMC; PMC3838256; 24109231. DR EuropePMC; PMC6341152; 29635866. XX FH Key Location/Qualifiers FH FT source 1..4615 FT /organism="Turkey parvovirus 260" FT /strain="260" FT /mol_type="genomic DNA" FT /country="USA" FT /db_xref="taxon:740934" FT gene 1..2085 FT /gene="NS1" FT CDS 1..2085 FT /codon_start=1 FT /gene="NS1" FT /product="NS1" FT /note="nonstructural protein" FT /db_xref="GOA:D3X6X5" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D3X6X5" FT /protein_id="ADD22713.1" FT /translation="MAFPTRGGFSAILNLPSDLIVGQKNMPVFECVTAGYTSPDSGEFV FT ASRFPPNHELRQEIRNFIGNPEWDDPDLTWIDFHIQLAKHAIDVETKLNPNLQIFWQME FT KSSQSGRYHLHLLFVEGCTSRQITWIVKRMRRELCNKAAEMLHMFCPDFPKSQIWGSLV FT NIQNAMLSLNRGYSPRIGKPIPQPVNPYSFLKYYMFNSAKMSFLRGATPKLAEKLPIGT FT RYARFEGSPDLDEGPEIPSQELTPGDTLPVCYVSTETDWGNGGGETVIKTSIIEKLCME FT ALRLCRENHIFTMKAFKLKFPDKFMQFSSRNQGLVKLEETINLYCETIINEHNAWEIAK FT SIHGDVDTADLDDNLAIRLCSYQGYSPKYVARLILCWLSGQAGKKNALYFHGPANTGKT FT MMAESICKMVQIYGNVNHNNKNFPFNDCHNKAVLWWEECSMTEEHVESAKCIMGGSSVR FT IDKKNQDSVLLCKTPIVITSNNDITQVSSRNAISTVHAAAIRARCLKFTFNNWLTSNWG FT LITVEQMYQFLCWGELEGIPNVDSLLKDHPEFNGTLPYNQPKGKFCADCVNQFSTATNL FT TVCPACSGWTRKPFSEEEEPPYTGSESGLFEKANEGKNEVPGIYPVNSGSRLIPEAPIL FT QKPSTYWETEIPSESSGFPDEPDFTASAKLLLKVDDLHLESDLKVEQDPLECKKCCLVQ FT " FT gene 2286..2591 FT /gene="NP1" FT CDS 2286..2591 FT /codon_start=1 FT /gene="NP1" FT /product="NP1" FT /db_xref="UniProtKB/TrEMBL:D3X6X6" FT /protein_id="ADD22714.1" FT /translation="MCWYNNNIAQIETVEGDPCTNTNVFHELYLPIKQHAMDARMLKMK FT IEDKILKGDFSQDVHLDMTLTQCIQTALSDDPAGIWPCVDRLANYCNVILASIGTQ" FT gene 2588..4615 FT /gene="VP1" FT CDS 2588..4615 FT /codon_start=1 FT /gene="VP1" FT /product="VP1" FT /note="minor capsid protein" FT /db_xref="GOA:D3X6X7" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:D3X6X7" FT /protein_id="ADD22715.1" FT /translation="MKYKAPKGYVPSLPTTDEEAYHHTRWWLDHVENYGKNKAIGRGKG FT KARKELTPQQKAERKRFFITQAQKNKKPNYGIPSSSQHKEFFKNHQGAQGGKAKQKTKH FT IENQAPQRQEDPEEGPAPKQPRVEENPYNQEELEEMMADENEPDQSGIPMELSDGPGTV FT GGGGGGGIGHSTGNWNCDTIWAENTCKTYASRHCVCLMRDMDQYKAIGNANGQHGLDTE FT NQTQYFGFSTPWNYIDFNQYSVHFSPRDWQQLVNNYSRWRPRAVHVKIFNLQVIQKTVT FT DSGTQYSNDLTGTIQIFADQEGRYPRLLYPNQTTLMGPFPSNIYYLPQYAYMTSMFNSG FT GPTVSSWWGFPTRESAFYCLDESPSQMLRTGNEWETTFVFPSSTQWCNNKISTVSITQR FT QNPLYDTWNVNGRGDDAKRGNFCTWRSPWYPGPYIYLTDTSAASQRLENLANVAVGPDG FT MPLAPGMPQYRSESDKDEYLHTFWVPKKVKMNEGDIRNAQIDVSTATKVQVDTSTLYNT FT CPRSGYMSTVSQGGAPAPIVWSGCVPGMIWDNRPATYFDPIWQQFPETDEQFKIISQLG FT GIPVKESPGHIFVKVTPKPTGAANGLIDEYCTFTCTVEIEWELEPLNTHRWNMRSMISY FT ETTDAKAGRQIVDENGQYQVNVNSADITRLYMTKRAPRTN" FT gene 3005..4615 FT /gene="VP2" FT CDS 3005..4615 FT /codon_start=1 FT /gene="VP2" FT /product="VP2" FT /note="major capsid protein" FT /db_xref="GOA:D3X6X8" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:D3X6X8" FT /protein_id="ADD22716.1" FT /translation="MMADENEPDQSGIPMELSDGPGTVGGGGGGGIGHSTGNWNCDTIW FT AENTCKTYASRHCVCLMRDMDQYKAIGNANGQHGLDTENQTQYFGFSTPWNYIDFNQYS FT VHFSPRDWQQLVNNYSRWRPRAVHVKIFNLQVIQKTVTDSGTQYSNDLTGTIQIFADQE FT GRYPRLLYPNQTTLMGPFPSNIYYLPQYAYMTSMFNSGGPTVSSWWGFPTRESAFYCLD FT ESPSQMLRTGNEWETTFVFPSSTQWCNNKISTVSITQRQNPLYDTWNVNGRGDDAKRGN FT FCTWRSPWYPGPYIYLTDTSAASQRLENLANVAVGPDGMPLAPGMPQYRSESDKDEYLH FT TFWVPKKVKMNEGDIRNAQIDVSTATKVQVDTSTLYNTCPRSGYMSTVSQGGAPAPIVW FT SGCVPGMIWDNRPATYFDPIWQQFPETDEQFKIISQLGGIPVKESPGHIFVKVTPKPTG FT AANGLIDEYCTFTCTVEIEWELEPLNTHRWNMRSMISYETTDAKAGRQIVDENGQYQVN FT VNSADITRLYMTKRAPRTN" XX SQ Sequence 4615 BP; 1553 A; 994 C; 979 G; 1089 T; 0 other; atggcattcc caacacgcgg tgggttttcc gctattctaa atcttcccag cgatttaatc 60 gtgggacaga aaaatatgcc tgtattcgag tgtgtaactg ccggttacac ttctccggat 120 tcaggcgaat tcgtggcttc tagatttcca cccaaccacg aattgagaca agaaattaga 180 aattttatcg ggaacccaga atgggacgat ccagatttga catggataga tttccacatt 240 caattggcga aacacgccat agacgtggaa actaaactca atccaaattt acaaattttc 300 tggcaaatgg aaaaatctag tcagtcggga agatatcatc tccatttact gttcgtagaa 360 ggatgtactt ccaggcaaat tacatggata gtcaaaagaa tgagaaggga actttgcaac 420 aaagctgcag aaatgttgca catgttttgt cctgatttcc ccaaaagtca aatttgggga 480 tcgctggtga atatccaaaa cgctatgctt tcactgaata gaggatactc accgagaatt 540 gggaaaccaa tcccccaacc agtgaatcca tactcatttc taaaatacta catgttcaat 600 tctgctaaaa tgagctttct gagaggggct actccaaaat tagctgaaaa attaccaatt 660 ggtacaagat atgctagatt tgaagggtct cctgacctgg acgagggtcc cgaaattcca 720 tcgcaggaat taactccagg ggacactcta cctgtatgct atgtaagtac tgaaactgat 780 tgggggaatg gtggggggga gaccgtaatc aaaaccagta tcattgaaaa attatgcatg 840 gaagcattga gattatgcag agaaaatcac atttttacca tgaaagcatt taagctaaaa 900 ttcccagaca aattcatgca attcagttcg cgaaatcagg ggttagtgaa attagaagaa 960 acaataaacc tatattgtga gaccattatc aacgaacaca atgcgtggga aatagctaaa 1020 tcaatacatg gagatgttga cacagctgat ctagatgata atttagccat ccggttatgc 1080 agctaccaag gatatagtcc aaagtacgtt gctagactga tattgtgctg gctatccgga 1140 caagcaggaa agaaaaacgc attatatttc cacggaccag ccaatactgg taaaacaatg 1200 atggcagaaa gcatatgcaa aatggttcaa atatacggta atgtaaatca caacaacaaa 1260 aacttcccat tcaacgactg ccacaataag gcagtacttt ggtgggaaga atgcagcatg 1320 acagaagaac acgtagaatc agcaaaatgt atcatggggg gatcctcagt gagaatagat 1380 aagaaaaatc aagattcggt cctattatgt aaaactccga tcgttattac ttccaataac 1440 gatatcactc aagtttcaag caggaatgcc atctcaacag ttcatgcagc tgcaataaga 1500 gcaagatgct taaaatttac atttaacaat tggctaactt caaattgggg attgataacc 1560 gttgaacaaa tgtaccaatt tttatgctgg ggagaattag agggcattcc gaacgtggat 1620 agtctcctaa aagatcatcc cgaatttaac gggactttgc cttataacca acccaaaggt 1680 aaattttgtg ccgattgtgt taaccagttc agcactgcaa ctaacctgac cgtgtgccca 1740 gcctgctccg ggtggacaag aaagcccttc tccgaagaag aggaaccccc ctatactggt 1800 tctgaatccg ggctctttga gaaagccaac gaaggtaaga atgaggtccc agggatttat 1860 cccgtaaata gtggatccag gttaatccct gaggccccaa tcttacagaa accatcgacc 1920 tattgggaga cggagatccc cagcgaatcg agtggatttc cagacgagcc agacttcacc 1980 gcaagcgcaa aacttctcct gaaagtggac gatctccacc tagaaagcga tctgaaagtg 2040 gagcaggatc ctctggagtg caaaaagtgc tgtctggttc aataggccaa ctcgaaggta 2100 aaagcataac atttaatgat gatctacctt cccttactga gttattttgc gacgaaacgc 2160 tccccccatc cccgacatcc ccaatcaatc tccctgaacc ctctcgcgtg gtacaatggg 2220 gggacttcaa agctcaatgg gtggaaggat acattggaaa gtggagggtt gcattttcta 2280 atttcatgtg ttggtataac aataatattg cacaaattga aacggtagaa ggtgatccat 2340 gtactaatac taacgttttt cacgagttat atctccctat caagcaacac gccatggacg 2400 cacgcatgct gaaaatgaaa atcgaagaca aaatactaaa aggcgacttc tcacaagacg 2460 tacacttaga catgacatta acacaatgca ttcaaacagc acttagcgat gacccagcag 2520 ggatatggcc atgtgtagac aggttagcta attactgcaa tgttatattg gcttctatag 2580 gcacacaatg aaatacaaag ctccgaaagg ctacgtccct tcactaccca ctactgacga 2640 agaagcatat caccacacta gatggtggct ggatcatgtt gaaaattatg gaaaaaataa 2700 agctattggt agaggcaaag gaaaagctag gaaagagctc acaccacaac aaaaagctga 2760 acgcaaacgc ttttttatca cgcaggcaca aaaaaataaa aaacctaatt acggcatccc 2820 atcttcatcg cagcacaaag agtttttcaa aaatcatcag ggggcacaag ggggaaaagc 2880 aaagcaaaaa accaaacata tagaaaatca agcaccacaa aggcaagagg acccagagga 2940 agggcccgca cctaaacaac ctagagtaga agaaaaccca tataatcaag aagaattaga 3000 agaaatgatg gccgatgaga atgaacctga tcaatctggg atccctatgg aattgagcga 3060 tgggccggga accgtagggg gtggtggtgg tgggggaatc gggcattcta ccggtaattg 3120 gaattgtgat actatatggg ctgaaaatac atgtaaaacc tatgcaagcc gccattgtgt 3180 ctgtcttatg cgtgacatgg atcaatataa agcaattggc aacgctaacg ggcaacacgg 3240 gttagacact gaaaaccaaa cacaatattt cgggttctcc acaccatgga attatattga 3300 ctttaatcaa tacagcgtgc actttagtcc acgagattgg caacagctag ttaacaatta 3360 ttcgagatgg cgcccacgcg ccgtacacgt gaaaatcttt aacctgcaag tcatccagaa 3420 aacagtaaca gatagcggta cccagtactc taacgacttg acaggcacaa tccaaatatt 3480 tgcagatcaa gaaggcagat atcctaggtt attataccct aaccaaacaa ctctaatggg 3540 tccatttcca tccaatatat attatctgcc tcaatacgca tacatgacaa gcatgtttaa 3600 ttcgggtgga ccaactgtat catcttggtg gggtttcccg acacgcgaaa gcgcatttta 3660 ttgcttagac gagagcccat cgcaaatgtt aaggaccggt aatgagtggg aaactacatt 3720 tgtttttcca tcgagtacac aatggtgtaa caataaaata tcaactgtgt ccatcacaca 3780 gagacaaaac ccattatacg atacatggaa cgttaatggc agaggcgatg acgctaaaag 3840 aggcaatttc tgtacttgga gaagcccatg gtatccaggg ccttacattt acctaaccga 3900 tacatccgca gcatcacagc gtttagaaaa tcttgctaac gttgccgtag gcccagacgg 3960 catgcctctg gcaccaggaa tgccacaata cagatcagaa tccgataaag acgaatatct 4020 acatacattt tgggtaccta aaaaagttaa aatgaatgaa ggagacatac gtaacgcgca 4080 aatagatgtc tccactgcaa ccaaagtaca agtagataca tcgacactat acaatacatg 4140 tcctagatca ggatacatgt caactgtttc acagggaggg gcacccgcac ctattgtctg 4200 gtcaggatgt gtaccaggca tgatatggga caataggcca gccacttact tcgacccaat 4260 atggcaacaa ttcccagaga cagacgaaca attcaaaatt atctctcaat tggggggtat 4320 acctgttaaa gaatcacctg gtcacatttt tgtcaaagtc acgcctaagc caaccggggc 4380 tgcaaatggt ttgatcgatg aatattgtac ttttacgtgc actgtcgaaa tagaatggga 4440 attagaacca ctcaatactc acagatggaa catgagaagc atgatttcgt acgagaccac 4500 cgatgccaaa gctggaagac aaattgtcga tgaaaatggt caataccagg tcaatgttaa 4560 ctcggctgac attactcgtc tgtatatgac caagcgcgcg ccgcggacca actaa 4615 //