Dbfetch

Dbfetch

ID   GU199586; SV 1; linear; genomic DNA; STD; VRL; 524 BP.
XX
AC   GU199586;
XX
DT   16-DEC-2009 (Rel. 103, Created)
DT   16-DEC-2009 (Rel. 103, Last updated, Version 1)
XX
DE   Tobacco curly shoot virus clone 20-1 AV2 protein (AV2) gene, complete cds;
DE   and coat protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tobacco curly shoot virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-524
RA   Xiong Y., Qing L.;
RT   "First report of Tobacco curly shoot virus on Mirabilis jalapa Linn. and
RT   Alternanthera philoxeroides in China";
RL   Unpublished.
XX
RN   [2]
RP   1-524
RA   Xiong Y., Qing L.;
RT   ;
RL   Submitted (09-NOV-2009) to the INSDC.
RL   Plant Pathology, College of Plant Protection, Tiansheng Road 2, Chongqing
RL   400716, China
XX
DR   MD5; 14897f8ef24df651764b6aae65f01da4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..524
FT                   /organism="Tobacco curly shoot virus"
FT                   /host="Alternanthera philoxeroides"
FT                   /isolate="YN20"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /collection_date="21-Aug-2008"
FT                   /clone="20-1"
FT                   /PCR_primers="fwd_seq: taatattacckgwkgvccsc, rev_seq:
FT                   tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:180526"
FT   gene            141..488
FT                   /gene="AV2"
FT   CDS             141..488
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:D2KBY0"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:D2KBY0"
FT                   /protein_id="ACZ71245.1"
FT                   /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT                   ISVIRAGNYVEATSRYNHSRGRFAGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT                   KTQDVQDVQKS"
FT   gene            301..>524
FT                   /gene="AV1"
FT   CDS             301..>524
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2KBY1"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:D2KBY1"
FT                   /protein_id="ACZ71246.1"
FT                   /translation="MSKRPADIIIPAAASQVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCGGPCKV"
XX
SQ   Sequence 524 BP; 137 A; 127 C; 123 G; 137 T; 0 other;
     taatattacc ggatggccgc gatttttttt aaagtgggcc ccttgatgtg atatgtcatc        60
     caatcaaaac gctcccccaa agcttaattg ttttgtggtc acttatttaa acttgctcgc       120
     caagtagtgc actccgcact atgtgggatc cattagtaaa cgagtttccc gaaaccgttc       180
     acggctttcg ttgtatgtta gcagttaaat atctgcagtt agtagagaag acttattcgc       240
     ctgacacatt agggcacgat ttaattaggg atttaatctc agttattagg gctggaaatt       300
     atgtcgaagc gaccagcaga tataatcatt cccgcggccg cttcgcaggt acgccgccgt       360
     ctcaacttcg acagcccata tgtgagccgt gctgctgccc ccattgtccg cgtcaccaaa       420
     gcaagagcat gggcgaacag gcccatgaac agaaaaccca ggatgtacag gatgtacaga       480
     agtcctgatg tccctagagg atgtggaggc ccatgcaagg tcca                        524
//