ID GU199583; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC GU199583; XX DT 16-DEC-2009 (Rel. 103, Created) DT 16-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Tobacco curly shoot virus clone 20-9, complete genome. XX KW . XX OS Tobacco curly shoot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Xiong Y., Qing L.; RT "First Report of Tobacco Curly Shoot Virus on Mirabilis jalapa Linn. and RT Alternanthera philoxeroides in China"; RL Unpublished. XX RN [2] RP 1-2743 RA Xiong Y., Qing L.; RT ; RL Submitted (08-NOV-2009) to the INSDC. RL Plant Pathology, College of Plant Protection, Tiansheng Road 2, Chongqing RL 400716, China XX DR MD5; 5a2745398fce43ec85a055a5e72a2ef2. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Tobacco curly shoot virus" FT /host="Alternanthera philoxeroides" FT /isolate="YN20" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="21-Aug-2008" FT /clone="20-9" FT /PCR_primers="fwd_seq: ccgccgtctcaacttcgacag, rev_seq: FT atctgctggtcgcttcgacat" FT /db_xref="taxon:180526" FT gene 134..481 FT /gene="AV2" FT CDS 134..481 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:D2KBW6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2KBW6" FT /protein_id="ACZ71217.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHSRGRFESMPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KTQDVQDVQKS" FT gene 294..1064 FT /gene="AV1" FT CDS 294..1064 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D2KBW7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2KBW7" FT /protein_id="ACZ71218.1" FT /translation="MSKRPADIIIPAAASKVCRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1061..1465) FT /gene="AC3" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:D2KBW8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2KBW8" FT /protein_id="ACZ71219.1" FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKILEHQNRPXXMKEDI FT MTIQIXFNYNLRKVLGVHKCFLVFRIWMTSQPQTGRFLRVFKTQVFKYLNNLGIISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" FT gene complement(1206..1610) FT /gene="AC2" FT CDS complement(1206..1610) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:D2KBW9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2KBW9" FT /protein_id="ACZ71220.1" FT /translation="MRSSSPSKAHSTQVPIKVKHRLAKKGNRRRRVDLPXGCSYFIALA FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDIRAPEPSXSHERRHNDNPNXVQLQP FT SESSGSAQVFSSLPNLDDFTASDWSFLKGL" FT gene complement(1513..2598) FT /gene="AC1" FT CDS complement(1513..2598) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:D2KBX0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2KBX0" FT /protein_id="ACZ71221.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKAYM FT EKDGDVLDHGIFQIDARSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFH FT NLNSNLDRIFTPPIEEYISPFLSSSFDQVPEELEEWAAENVASAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLESPL FT YSGSNQSEAQASQEGEQTSSC" FT gene complement(2148..2447) FT /gene="AC4" FT CDS complement(2148..2447) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2KBX1" FT /protein_id="ACZ71222.1" FT /translation="MKMGLLTCMSSSNSKENSSVKIKDSSISHPQPDQHISIRTFRELK FT AQQMLKHTWKKTETCLIMEFSRSMQDQLEEVANLPTTHMPRQSIQXPKQRPSIY" XX SQ Sequence 2743 BP; 755 A; 527 C; 599 G; 857 T; 5 other; accggatggc cgcgattttt tttaaagtgg gccccttgat gtgatatgtc atccaatcaa 60 aacgctcccc caaagcttaa ttgttttgtg gtcacttatt taaacttgct cgccaagtag 120 tgcactccgc actatgtggg atccattagt aaacgagttt cccgaaaccg ttcacggctt 180 tcgttgtatg ttagcagtta aatatctgca gttagtagag aagacttatt cgcctgacac 240 attagggcac gatttaatta gggatttaat ctcagttatt agggctagaa attatgtcga 300 agcgaccagc agatataatc attcccgcgg ccgcttcgaa agtatgccgc cgtctcaact 360 tcgacagccc atatgtgagc cgtgctgctg cccccattgt ccgcgtcacc aaagcaagag 420 catgggcgaa caggcccatg aacagaaaac ccaggatgta caggatgtac agaagtcctg 480 atgtccctag aggatgtgaa ggtccatgta aggtccagtc ttttgagtct agacatgaca 540 ttcagcatat aggtaaagtt atgtgtgtca gtgatgttac gcgtggaact gggctgactc 600 atcgagtggg taaaaggttt tgtgttaaat ccgtttatgt cttgggtaag atctggatgg 660 atgaaaatat taagaccaag aatcacacta acagtgttat gtttttttta gttagggatc 720 gtaggcctgt ggataaacct caagattttg gagaggtttt taacatgttt gataatgagc 780 ccagtacggc tactgtgaag aatgttcatc gtgataggta tcaagttctt cgcaaatggc 840 atgcaactgt tacgggtgga caatatgcgt ccaaggaaca agctcttgtg aagaagtttg 900 ttagggttaa taattatgtt gtgtataacc agcaagaagc tggcaagtat gaaaatcatt 960 ctgagaatgc gttaatgttg tatatggcat gtactcatgc ctctaaccct gtgtatgcta 1020 ctttgaagat acggatctat ttctatgatt ccgtaacaaa ttaataaata ttaaatttta 1080 ttgaataaga ttggtctaca tatacaatgt gttctaatac atcccataat acatgatcaa 1140 ctgcacgaat tacattatta atactgataa ttcctaaatt atttaaatat ttaaagactt 1200 gagtcttaaa gacccttaag aaacgaccag tctgaggctg tgaagtcatc cagattcgga 1260 agactagaaa acacttgtgc actcccagaa ctttccgaag gttgtagttg aactktattt 1320 ggattgtcat tatgtcttct ttcatgrgaa wtggacggtt ctggtgctct aatatcttga 1380 aataaagggg attttgaatc tcccagatat acacgccatt ctctgcttga gctgcagtga 1440 tgagttcccc tgtgcgtgaa tccatgatcg tgacaggcta gtgctatgaa atatgaacaa 1500 ccacmaggga gatcaacacg acgacgtctg ttccccttct tggctagcct gtgcttcact 1560 ttgattggaa cctgagtaga gtgggctttc gagggtgacg aagatcgcat tctttaaagc 1620 ccaattttta agtgctgtat ttttctcttc atccaaaaat tctttatagc tagagttggg 1680 tcctggattg cagagaaaga tagtgggaat tccgccttta atttgaactg gctttccgta 1740 ctttgtattg ctttgccagt ctctttgggc ccccatgaat tctttaaagt gctttaggta 1800 gtgcggatct acgtcatcaa tgacgttata ccaagcatca ttattgtaca ccttagggct 1860 tagatctaaa tgcccacaca agtaattatg tggtcccaat gacctggccc acatcgtctt 1920 ccctgttcta ctgtcacctt caattactat actaatgggc ctcaatggcc gcgcagcggc 1980 actggcgaca ttctcggcag cccactcctc aagttcttct ggaacttgat caaaagaaga 2040 agataaaaaa ggagaaatat attcctctat cggaggagta aaaatcctat ctaaattaga 2100 atttaaatta tgaaactgta atacaaaatc tttaggagcc ttctccttta atatattgag 2160 ggccgctgct ttggamcctg aattgattgc ctcggcatat gcgtcgttgg cagattggca 2220 acctcctcta gctgatcttg catcgatctg gaaaattcca tgatcaagca cgtctccgtc 2280 tttttccatg tatgctttaa catctgttga gcttttagct ccctgaatgt tcggatggaa 2340 atgtgctgat ctggttgggg atgtgagatc gaagaatctt tgatttttac actggaattt 2400 tccttcgaat tggatgagga catgcaggtg aggagtccca tcttcatgga gttccctgca 2460 gattctgatg aataatttat tagttggtgt ttctagggct tgaatttggg aaagtgcctc 2520 ctctttagtg agagaacaat gtgggtatgt gagaaaatag tttttggcat ttattctgaa 2580 tttattagga ggagccattg actggtcaat cggtgtctct caaacttggc tatgcaatcg 2640 gtgtctggtg tcttatttat atgtggacac caaatggcat aattgtaatt tattaaatgt 2700 aattcaaaat tcaaaatcca aaagcggcca tccgtataat att 2743 //