ID   GU181406; SV 2; linear; genomic RNA; STD; VRL; 1610 BP.
XX
AC   GU181406;
XX
DT   06-DEC-2009 (Rel. 103, Created)
DT   11-OCT-2012 (Rel. 114, Last updated, Version 3)
XX
DE   Prune dwarf virus isolate PDV-SWM1 movement protein and coat protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Prune dwarf virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   "Molecular variability of CP gene among PDV isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   ;
RL   Submitted (04-NOV-2009) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Science,
RL   Nowoursynowska 159, Warsaw 02-776, Poland
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   ;
RL   Submitted (03-OCT-2012) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Science,
RL   Nowoursynowska 159, Warsaw 02-776, Poland
XX
DR   MD5; 6516bd5780b4334fbdb89b5f8eeee778.
XX
CC   On Oct 3, 2012 this sequence version replaced gi:270036720.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1610
FT                   /organism="Prune dwarf virus"
FT                   /segment="RNA3"
FT                   /host="sweet cherry cv. Napoleona"
FT                   /isolate="PDV-SWM1"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="21-Jan-2009"
FT                   /PCR_primers="fwd_seq: gtgtagaaagaagagaagtccgacaag,
FT                   rev_seq: atctagaagcagcatttccaactacga"
FT                   /db_xref="taxon:33760"
FT   CDS             1..882
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0IHS7"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0IHS7"
FT                   /protein_id="AFU49022.1"
FT                   /translation="MAFSGVSRTITGQTSEANASSAFEVSAEDWNKILSEVDDFYSQTM
FT                   MKNLPTKKCFSLQLKNGIPIQPMKLQSKESRSALARLSAKAKGHVYVHHSIIYLLYIPT
FT                   ILETTSGVLTLKLFNVNTGESIDIDTDSPLNEAAIFVARWPRAVHADDGDGICLLASAV
FT                   SVDAKHASIVGTVYPFWDDSLHKKKPYEKMYPTLRFPIEKSEALAAVDDVKILQTFTKS
FT                   RLVIGSSGKVDINPRLIEIKSDESKKALTVDFKNIAVPVKGKSSLDSFKEAESVPLKGE
FT                   KSDKEAFGVTIG"
FT   CDS             954..1610
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:D2K6I5"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:D2K6I5"
FT                   /protein_id="ACZ58168.1"
FT                   /translation="MSGKATKSGKPTTRSQSFALARKNNNTTPPAGFVKKQFPGGSSKS
FT                   VSEWMLHGPNVPVKSFSGMISRTENLTVNSTASGVYYTMKVRELFKDFSADTKVYGIVF
FT                   RYCLDVSNGVYGLIKGFDVNAPVAPNPLQRRKFTAKQASGVQILAPTGMIVGDIPDDLW
FT                   FVIKYDNAFQPDVPVWFCTQYLQHSMPKRVEIPDSVLYAERDTALMDAMDKIVSG"
XX
SQ   Sequence 1610 BP; 463 A; 316 C; 351 G; 480 T; 0 other;
     atggctttct ctggagtatc caggaccatt accggacaga cgtccgaagc caatgccagt        60
     tcggcatttg aagtttccgc tgaagattgg aataaaatac tcagcgaagt ggatgatttt       120
     tattcccaaa ctatgatgaa gaatcttcca actaagaaat gtttttcttt acagttgaag       180
     aatggtattc caattcaacc catgaagttg caatccaaag aatcccgaag tgctttagca       240
     agattatccg ctaaagcaaa aggtcatgta tacgtgcatc atagtataat ttacttgttg       300
     tacattccga ccattctgga aacaactagt ggggtattaa cattgaaact cttcaatgta       360
     aatactggtg aatctattga tatagatacg gattcaccgt tgaatgaagc ggctattttt       420
     gtagcaagat ggccaagagc agttcatgct gatgacggag atggtatatg tttactagca       480
     tcagctgtaa gtgtggacgc taaacatgcg tcaattgttg gaactgttta ccccttttgg       540
     gatgactcat tgcataagaa gaaaccatat gagaaaatgt acccaacttt gagattcccg       600
     attgagaaat cggaagccct tgctgctgtg gatgatgtaa agatactcca aacatttact       660
     aaatcacgtt tggtaattgg gagtagtgga aaggttgata ttaatcccag acttattgaa       720
     attaagtctg atgagtcaaa gaaggcttta acagtagatt ttaagaatat tgctgtaccc       780
     gtaaaaggta aatcttccct tgatagtttc aaggaagccg agtctgttcc tctcaaagga       840
     gagaagtccg acaaggaagc ttttggtgta acgattggtt aacttacttt gtaagttaat       900
     agctcgtttt gtttaccaat ttcttccatt tctcgtttgt ttatactctc ataatgtctg       960
     ggaaagctac taaatctgga aagcctacta cccgatcaca aagctttgct ttagctcgga      1020
     agaataataa tactaccccc cctgctggtt ttgttaagaa acaattcccg ggtggaagct      1080
     cgaagtctgt ttccgagtgg atgcttcacg ggccaaatgt acccgtaaaa agtttttccg      1140
     gtatgatatc tcgtaccgag aatctgacgg tcaattcgac cgcttccggt gtctactaca      1200
     ccatgaaagt ccgagaactt ttcaaggact tttctgctga taccaaggta tacggaattg      1260
     ttttccgtta ctgccttgac gtttctaatg gtgtctacgg actcattaaa ggtttcgatg      1320
     tgaatgcgcc agtggcgcct aatcccctac aacgtaggaa gttcacagcg aaacaagcca      1380
     gtggggtgca aattcttgct cctactggta tgattgtcgg ggatatacca gatgatctct      1440
     ggtttgtcat aaaatatgac aatgcttttc agcccgacgt tccggtgtgg ttctgtactc      1500
     agtacctcca acactcgatg cccaagagag ttgagatccc tgattcagtg ttatacgctg      1560
     aacgggatac tgctcttatg gacgcaatgg ataaaatagt cagtggatga                 1610
//