ID   GU181405; SV 2; linear; genomic RNA; STD; VRL; 1610 BP.
XX
AC   GU181405;
XX
DT   06-DEC-2009 (Rel. 103, Created)
DT   11-OCT-2012 (Rel. 114, Last updated, Version 3)
XX
DE   Prune dwarf virus isolate PDV-PA63 movement protein and coat protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Prune dwarf virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   "Molecular variability of CP gene among PDV isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   ;
RL   Submitted (04-NOV-2009) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Science,
RL   Nowoursynowska 159, Warsaw 02-776, Poland
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1610
RA   Mroczkowska K., Paduch-Cichal E., Sala-Rejczak K.;
RT   ;
RL   Submitted (03-OCT-2012) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Science,
RL   Nowoursynowska 159, Warsaw 02-776, Poland
XX
DR   MD5; 44f4ddd1e02d6097c32900971ee60b60.
XX
CC   On Oct 3, 2012 this sequence version replaced gi:270036718.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1610
FT                   /organism="Prune dwarf virus"
FT                   /segment="RNA3"
FT                   /host="Prunus avium F12/1"
FT                   /isolate="PDV-PA63"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="21-Jan-2009"
FT                   /PCR_primers="fwd_seq: gtgtagaaagaagagaagtccgacaag,
FT                   rev_seq: atctagaagcagcatttccaactacga"
FT                   /db_xref="taxon:33760"
FT   CDS             1..882
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:D6QZ65"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:D6QZ65"
FT                   /protein_id="AFU49021.1"
FT                   /translation="MAFSGVSRTITGQTSEANTSSAFEVSAEDWNKILSEVDDFYSQTM
FT                   MKNLPTKKCFSLQLKNGIPIQPMKLQSKESRSALARLSAKAKGHVYVHHSIIYLLYIPT
FT                   ILETTSGVLTLKLFNVNTGESIDIDTDSPLNEAAIFVARWPRAVHADDGDGICLLASAV
FT                   SVDAKHASIVGTVYPFWDDSLHKKKSYEKMYPTLRFPIDKSEALAAVDDVKILQTFAKS
FT                   RLVIGSSGKVDINPRLIEIKSDESKKALTVDFKNIAVPVKGKSSLDSFKEAESVPLKGE
FT                   KSDKEAFGVTIG"
FT   CDS             954..1610
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:D2K6I4"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:D2K6I4"
FT                   /protein_id="ACZ58167.1"
FT                   /translation="MSGKAAKSGKPTTRSQRFALARKNNNTTPPAGFVKKQFPGGSSKS
FT                   VSEWMLHGPNVPVKSFSGMISRTENLTVNSTASGVYYTMKVRELFKDFAADTKVYGIVF
FT                   RYCLDVSNGVYGLIKGFDVNAPVAPNPLQRRKFTAKQASGVQILAPTGMTVGDIPDDLW
FT                   FVIKYDNAFQPDVPVWFCTQYLQHSMPKRVEIPDSVLYAERDTALMDAMDKIVSG"
XX
SQ   Sequence 1610 BP; 460 A; 319 C; 356 G; 475 T; 0 other;
     atggctttct ctggtgtatc caggaccatt accggacaga cgtccgaagc caataccagt        60
     tcggcatttg aagtttccgc tgaagattgg aataaaatac tcagcgaagt ggatgacttt       120
     tattcccaaa ctatgatgaa gaatcttcca actaagaaat gtttttcttt acagttgaag       180
     aatggtattc caattcaacc catgaagttg caatccaaag aatcccgaag tgctttagca       240
     agattatccg ctaaagcaaa aggtcatgta tatgtgcatc acagtataat ttacttattg       300
     tacatcccga ctattctgga aacaactagt ggggtattga cattgaaact cttcaatgta       360
     aataccggtg aatctattga tatagataca gattcaccgt tgaatgaagc ggctattttc       420
     gtagcaagat ggccaagggc agttcacgct gatgatggag atggtatatg tttactagca       480
     tcagctgtaa gtgtagacgc taaacatgcg tcaattgttg gaactgttta ccccttttgg       540
     gatgactcat tgcataagaa gaaatcatat gagaaaatgt atccaacttt gagattcccg       600
     attgataaat cggaagccct tgctgctgtg gatgatgtga agatacttca aacattcgcc       660
     aaatcacgtt tggtaattgg gagtagtgga aaggtcgata ttaatcccag acttattgaa       720
     attaagtctg atgagtcaaa gaaggcttta acagtagatt ttaagaatat tgctgtaccc       780
     gtaaagggta aatcttccct tgatagtttc aaggaagccg agtctgttcc tctcaaagga       840
     gagaagtccg acaaggaagc ttttggtgtg acgattggtt aactcacttt gtgagttaat       900
     agttcgtttt gtttaccaat ttcttccaat tctcgtgtgt ttatactctc ataatgtctg       960
     ggaaagctgc taaatctgga aagcctacta cccgatcaca aagatttgct ttagctcgga      1020
     agaataataa tactaccccc cctgctggtt ttgttaagaa acaattcccg ggtggaagct      1080
     cgaagtctgt ttccgagtgg atgcttcacg ggccaaatgt acccgtaaaa agtttttccg      1140
     gtatgatatc tcgtaccgag aatctgacgg tcaattcgac cgcttccggt gtctactaca      1200
     ccatgaaagt ccgagaactt ttcaaggact ttgctgctga taccaaggta tacggaattg      1260
     ttttccgtta ctgccttgac gtttctaatg gtgtctacgg actcattaaa ggtttcgatg      1320
     tgaatgcgcc agtggcgcct aatcccctac aacgtaggaa gttcacagcg aaacaagcca      1380
     gtggggtgca aattcttgct cctactggta tgactgtcgg ggatatacca gatgatctct      1440
     ggtttgtcat aaaatatgac aatgcttttc agcccgacgt tccggtgtgg ttctgtactc      1500
     agtacctcca acactcgatg cccaagagag ttgagatccc tgattcagtg ttatacgctg      1560
     aacgggatac tgctcttatg gacgcaatgg ataaaatagt cagtggatga                 1610
//