Dbfetch
ID GU180096; SV 1; circular; genomic DNA; STD; VRL; 2673 BP. XX AC GU180096; XX DT 09-DEC-2009 (Rel. 103, Created) DT 16-MAY-2010 (Rel. 104, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus isolate ToLCNDV-OM segment B, complete DE sequence. XX KW . XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2673 RX DOI; 10.1007/s10658-010-9586-0. RX AGRICOLA; IND44363462. RA Chang H.-H., Ku H.-M., Tsai W.-S., Chien R.-C., Jan F.-J.; RT "Identification and characterization of a mechanical transmissible RT begomovirus causing leaf curl on oriental melon"; RL Eur. J. Plant Pathol. 127(2):219-228(2010). XX RN [2] RP 1-2673 RA Jan F.-J.; RT ; RL Submitted (05-NOV-2009) to the INSDC. RL Department of Plant Pathology, National Chung Hsing University, 250 RL Kuo-Kuang Road, Taichung 402, Taiwan XX DR MD5; a191de5e58fa6032e11a5e8fc9b84f07. DR EuropePMC; PMC3125359; 21676270. DR EuropePMC; PMC6460037; 30975814. XX CC GenBank Accession Numbers GU180095-GU180096 represent the complete CC genome of Tomato leaf curl New Delhi virus. XX FH Key Location/Qualifiers FH FT source 1..2673 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="B" FT /host="Cucumis melo var. makuwa cv. Silver Light (oriental FT melon)" FT /isolate="ToLCNDV-OM" FT /mol_type="genomic DNA" FT /country="Taiwan" FT /collection_date="May-2007" FT /db_xref="taxon:223347" FT gene 441..1247 FT /gene="BV1" FT CDS 441..1247 FT /codon_start=1 FT /gene="BV1" FT /product="BV1" FT /db_xref="GOA:D2K6A0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D2K6A0" FT /protein_id="ACZ63317.1" FT /translation="MALSSPYPTPRRSGYPFNRTYNGNKSFRMWKCRKYQNWKRNRSIN FT SKSLSPTELFGDSISKQYTRKEICETQEGSEYLLNNNRHMTSYVSYPAKTRTGTNNRVR FT SYIKLKSLNLSGTIAVRKSDVMTESLQTNGLYGVMSVVVVRDKSPKIYSATQPLMPFVE FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNCIKKFCIRNCIPRTYTTWVTF FT KDEEEDSCSGLYSNTLRNAIILYYVWLSDVPSQVDLYSNVILNYIG" FT gene complement(1304..2149) FT /gene="BC1" FT CDS complement(1304..2149) FT /codon_start=1 FT /gene="BC1" FT /product="BC1" FT /db_xref="GOA:D2K6A1" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D2K6A1" FT /protein_id="ACZ63318.1" FT /translation="MSTGNEGMGMGVGGYIHSERVECALTNDAAEVTLSFPSMFEQKIS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSSFSVKDKNPWRVEYRVENANVVNGVHFCKMMGKLKLSSAKHSTDVEFRPPKIEIQ FT TKEFTVNDIDFWSVGSKPQTRRLVDGPRLIGHSSRSLRVPYLTIGPNESWASRSEIGIS FT SVSSRPYKNLNGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPISKGV FT " XX SQ Sequence 2673 BP; 751 A; 588 C; 532 G; 802 T; 0 other; accgaatggc cgcgaaaatt tttgccccac atcttgaccg ttgattcgta atcattgcag 60 gctagtacta gtcagatttg caacacgtgt attccactaa cagactttat gcaagtaaat 120 gtctgaaagg ggtcttgtaa cgtatatgtg gtcccaacat gccttttcgt acatcgcttg 180 tgtgcttttg tggtcccccc gcactacata aagtttatga catgaatgaa attgtgttct 240 ttgttatata aattttgatc ggtggagatc aaaattaaaa tgttgagaaa atgccagtcg 300 tccgatgtac tgagatatgc tttaattcaa acaattcttg tttgaatttt atccactgcc 360 taaaatacta aattataaat ctgctacata tatgacatta catggtttag tcgttgccac 420 acatttccca tctcagtgaa atggctcttt cttctcctta tcccacacct cgccgttccg 480 gttacccgtt caacagaacg tacaacggaa acaagagttt ccgcatgtgg aagtgtcgga 540 agtatcaaaa ctggaagcgc aatcgcagta tcaattccaa atcactctcc ccaacggaac 600 tgtttggtga ttcaatctcc aaacaatata cgcgtaagga aatctgtgaa acacaggagg 660 ggtctgagta tcttctcaac aacaatcgtc acatgacatc atatgtttct tatcctgcga 720 agacgagaac aggaacgaac aaccgcgttc gatcctatat caagttgaag agtttgaact 780 tatccgggac gattgccgtt cgaaagtcgg atgtgatgac tgaatctctg caaacaaacg 840 gactgtacgg ggtgatgtct gtagttgtag ttcgcgataa atcgccaaag atttattctg 900 cgacgcaacc cttgatgccg tttgtggaac tctttggatc tgttaatgca tgcaggggaa 960 gtctgaaagt ggcagaacgc caccatgaac gatttgtact gctgaatcaa acatccatcg 1020 tcgtcaacac cccacattcg aactgtatca agaaattctg cattcgtaac tgcatcccaa 1080 gaacgtacac aacttgggtg acgttcaaag acgaagaaga ggatagctgt agtggactat 1140 attcaaacac tctccgaaat gcaattattt tatactatgt ctggttaagc gatgtaccct 1200 cacaggtcga tctatatagc aatgtaattc ttaattacat tggatgatgt attgaaatgc 1260 actagaaaca ttatattcat aaataaaagt tgcttaaaac ttgttacacg ccctttgata 1320 ttggagcatt tacatttgat tttatacatt gctctacagt cttcgtaatt atgtccgcaa 1380 tttcttccct cgttatactc cctgcttgtg atgccgatgg acctggatcg attgccgaat 1440 cgtcgagtcc attcaggttt ttgtaaggtc tactgctgac ggacgaaatg cctatttccg 1500 atctgcttgc ccatgactcg ttcggaccta ttgttagata tggtacgcgt aacgatcttg 1560 aactatgtcc tattaacctt ggaccatcga caagacgcct tgtctgcggt ttggaaccca 1620 cagaccagaa atcaatgtcg ttaaccgtga attcctttgt ctggatttct atctttggtg 1680 gtcggaattc tacgtcagtc gaatgttttg ccgacgacag cttcaatttc cccatcattt 1740 tacagaagtg aactccattt acgacgtttg cgttctctac tcggtattcc actctccaag 1800 gattcttatc cttgacagag aaggatgaag aagagtagta gtgcaggttg cagttgcatt 1860 tgatcggaat tgtgaattcc gcttgtttcg tgtctccctc tgtcaatctc atgtcgtgta 1920 tctctatcac gacatgacca acagcattaa tgggcacctg actacgatat tccagtacga 1980 cgtgatcaat cttcatgcat ctattcctca actggcttat cttctgctcg aacattgaag 2040 gaaacgacaa tgtgacctct gcagcatcat ttgtgagagc acattcaaca cgttctgagt 2100 gaatataacc acctacgccc atgcccatcc cttcatttcc tgttgacata ttggtcgcgc 2160 agcgcaaagc ctacagaaac acagaaggac ggactacgac cctagaaacc ctagcgaaga 2220 acgaagtttt tttgcaaagg atggaggtat atgcatttat aatcgtttcc atgtcatgtc 2280 tatttcatcg taaataccct caaacgaacg gaacatattt gtcgataaaa aaggaattgt 2340 ggctgtgtat tgtccaatcg ctatatgtga ctgacatatt gggagcccaa ttttgtttaa 2400 ttgggctgtt gctattgaaa agaaaagccc attaaattgg cccagcatca aaatccatat 2460 tcatgacgac agcgcttggt tatatgatgt tacacaaagt tagagagaag caggagtttc 2520 tctctctaga caccatattg gcgtccccca actttctcta tgtaattggc gtctggcgtc 2580 ccatatatag gtaggacgct aaatggcagg attgtaattt cggatagaaa ttactttaat 2640 tcaaaaccct catagcggcc attcgttaat att 2673 //