ID GU180085; SV 1; circular; genomic DNA; STD; VRL; 2778 BP. XX AC GU180085; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Tomato leaf curl Sudan virus -[Wad Madani], complete genome. XX KW . XX OS Tomato leaf curl Sudan virus -[Wad Madani] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2778 RA Singh M.K., Mandal B., Elbadri G.A., Varma A.; RT "Monopartite begomoviral genome associated with the tomato leaf curl RT disease from Sudan"; RL Unpublished. XX RN [2] RP 1-2778 RA Singh M.K., Mandal B., Elbadri G.A., Varma A.; RT ; RL Submitted (05-NOV-2009) to the INSDC. RL Plant Pathology Div., Indian Agricultural Research Institute Advanced RL Centre for Plant Virology, Pusa Road, New Delhi 110012, India XX DR MD5; 290e503a84daa5e77c3ad0bb642d1b7f. DR EuropePMC; PMC4909005; 27366765. XX FH Key Location/Qualifiers FH FT source 1..2778 FT /organism="Tomato leaf curl Sudan virus -[Wad Madani]" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Sudan" FT /isolation_source="leaf" FT /collected_by="Gamal Abdalla Elbadri" FT /collection_date="2007" FT /identified_by="Manoj Kumar Singh" FT /db_xref="taxon:694582" FT gene 134..484 FT /gene="V2" FT CDS 134..484 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /db_xref="GOA:D2K686" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2K686" FT /protein_id="ACZ56368.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRACDYVEATRRYSHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT SKAQNIQNVSKS" FT gene 294..1067 FT /gene="V1" FT CDS 294..1067 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:D2K687" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2K687" FT /protein_id="ACZ56369.1" FT /translation="MSKRPGDIVISTPVSKVRRRLNFDSPYSSRAAVPTVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSFDKRHDLKHTGEVLCVSDVTRGNGLTH FT RVGKRFCIKSIYIVGKVWMDENIKVKNHTNTCMFWLVRDRRPVTTPYGFGELFNMYDNE FT PSTATIKNDLRDRCQVLKRFTASLSGGQYASKEQCVIRRFYKIYNHIVYNHQEQGKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSISN" FT gene complement(1064..1468) FT /gene="C3" FT CDS complement(1064..1468) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer" FT /db_xref="GOA:D2K688" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2K688" FT /protein_id="ACZ56370.1" FT /translation="MDSRTGELITAHQAENGVFIWEINNPLYFKITEHNERPFLMNHDI FT ISMQIRFNHNIRKVLGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLRYLDNIGVISINN FT VIRAVDHVLYDVLENTINVTEIHDIKYKFH" FT gene complement(1209..1616) FT /gene="C2" FT CDS complement(1209..1616) FT /codon_start=1 FT /gene="C2" FT /product="transactivation protein" FT /db_xref="GOA:D2K689" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2K689" FT /protein_id="ACZ56371.1" FT /translation="MQPSSPSTSHCSPVPIKVQHKIAKKQPIRRKRVDLDCGCSYYLHI FT NCINYGFTHRGTHHCSSSREWRFYLGDKQSPIFQDNRTQRETISNEPRHHFHADKIQPQ FT HQEGTGDSQMFSQLPNLDDLTASDWSFLKSI" FT gene complement(1525..2604) FT /gene="C1" FT CDS complement(1525..2604) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:D2K690" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2K690" FT /protein_id="ACZ56372.1" FT /translation="MAPPKRFKINAKNYFLTYPQCSLSLSEALSQLQNLETPVNKLYIK FT ICRELHENGEPHLHALVQFEGKYQCKNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTIDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEALRIIKELAPKDYILQFH FT NLNCNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIIIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNISLKNWALKNATFVTLYEPL FT FSSTNQGPTQDSQETTNQA" FT gene complement(2145..2447) FT /gene="C4" FT CDS complement(2145..2447) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2K691" FT /protein_id="ACZ56373.1" FT /translation="MGNLICMPLFSSKASTSARITDSSTWYPQVDQHISIQTFRELNPH FT LMSSPTSIKTETPSIGVSFRSMEDLQEEDNNQPMTLTQQHLTQAVSQRLLESLKN" XX SQ Sequence 2778 BP; 752 A; 534 C; 605 G; 887 T; 0 other; accggatggc cgcgcctctc tttttatggg tccctcacac gtcgctatca accaatcaaa 60 atgcatcctc aaacgttaga taattgttca tttgtcctta tatacgtggt ccccaagttg 120 tttgtccagc aatatgtggg atccacttct aaatgaattt cctgaaactg ttcatggatt 180 tcgttgtatg ttagctatta aatatttgca ggccgttgag gaaacttacg agcccaatac 240 attgggccac gatttaatta gggatcttat atctgttgta agggcctgtg attatgtcga 300 agcgacccgg cgatatagtc atttccacgc ccgtctcgaa ggttcgccga aggctgaact 360 tcgacagccc atacagcagc cgtgctgctg tccccactgt ccaaggcaca aacaagcgac 420 gatcatggac gtacaggccc atgtatcgaa agcccagaat atacagaatg tatcgaagtc 480 ctgatgttcc ccgtggatgt gaaggcccat gtaaggtcca gtcgtttgac aagcgccatg 540 atttgaagca tacgggtgag gtattgtgtg tttcagatgt aacacgtggt aatggcctta 600 ctcatcgtgt tgggaaacgt ttttgtatca agtctattta cattgttggc aaagtgtgga 660 tggatgagaa cattaaggtg aagaatcata ctaacacttg tatgttctgg cttgttcggg 720 atcgtcgtcc agttactact ccctatggat ttggagaact gtttaacatg tatgataatg 780 agccatctac tgccactatt aagaatgatc tgcgggatcg ttgtcaggtt cttaagaggt 840 tcactgctag tttgagtggt ggtcaatatg cttccaaaga gcaatgtgtc attaggcgat 900 tttataaaat ttataaccat attgtttata atcaccaaga gcaggggaaa tatgagaatc 960 atactgagaa cgctctttta ctgtatatgg catgtactca tgcttctaat ccagtgtatg 1020 ctactcttaa aataagggtg tacttctacg attcaatatc gaattaatga aatttatatt 1080 ttatatcatg aatctcggtt acatttattg tgttttcaag tacatcatac aatacatgat 1140 caactgctct aattacattg ttaattgaaa ttacaccaat attatctaaa tatctaagaa 1200 cttgatatct aaatactctt aagaaaagac cagtctgagg ccgtaaggtc gtccagattc 1260 ggaagttgag aaaacatttg tgaatcccca gtaccttcct gatgttgtgg ttgaatctta 1320 tctgcatgga aatgatgtcg tggttcatta gaaatggtct ctcgttgtgt tctgttatct 1380 tgaaatatag gggattgttt atctcccaga taaaaacgcc attctctgct tgatgagcag 1440 tgatgagttc ccctgtgcgt gaatccatag ttgatgcagt tgatgtggag gtagtatgag 1500 cagccacagt ctaggtctac acgcttacgc ctgattggtt gtttcttggc tatcttgtgt 1560 tggaccttga ttggtactgg agaacagtgg ctcgtagagg gtgacgaagg ttgcattctt 1620 gagagcccaa tttttcaagg aaatattttt ttcttcgtcc agatattcct tatatgagga 1680 ggtaggtcct ggattgcaca ggaagatagt gggaattccc cctttaattt gaatgggctt 1740 cccgtacttt gtgttgcttt gccagtccct ttgggccccc atgaattcct tgaagtgctt 1800 taaataatgc gggtctacgt catcaatgac gttataccac gcatcattac tgtacacctt 1860 tggacttagg tctagatgtc cacataaata gttatgtggg cctagagacc tagcccacat 1920 tgttttgcct gttctactat caccctcgat gataatactg ttaggtctcc atggccgcgc 1980 agcggaagac atgacgttct cggacaccca tacttcaagt tcctctggaa cttgattaaa 2040 agaagaagat aaaaaaggag aaatataagg agccggaggc tcctgaaaaa ttctatctaa 2100 attacaattt aaattatgaa actgtaaaat ataatctttc ggtgctaatt ctttaatgat 2160 tctaagagcc tctgacttac tgcctgcgtt aagtgctgct gcgtaagcgt cattggctga 2220 ttgttgtcct cctcttgcag atcttccatc gatctgaaac tcaccccaat cgatggtgtc 2280 tccgtcttta tcgatgtagg acttgacatc agatgaggat ttagctccct gaatgtttgg 2340 atggaaatgt gttgatctac ttggggatac caggtcgaag aatctgttat tcttgcactg 2400 gtacttgcct tcgaactgaa caagggcatg cagatgaggt tccccatttt cgtggagctc 2460 tctgcaaatt ttaatgtata atttatttac aggagtttcg aggttttgta gttgggaaag 2520 tgcttcggat aaagaaagag aacactgggg ataagtaagg aaataatttt tggcatttat 2580 tttaaaacgc tttgggggag ccatttggtc aatgtacccc gattgacttg gatttcattt 2640 atccctgcaa tcggtgtatt ggggtcctat atatacttgt accccaaatg gcaatttggt 2700 aatttagtaa aagtatattg caattcaaat ttcaaaattt aaaaatcaaa tcattaaagc 2760 ggccatccgt ataatatt 2778 //