ID GU178815; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC GU178815; XX DT 02-JUL-2010 (Rel. 105, Created) DT 02-JUL-2010 (Rel. 105, Last updated, Version 1) XX DE Tomato yellow leaf curl virus - Israel strain Australia:Brisbane3:2006 DE segment DNA A, complete sequence. XX KW . XX OS Tomato yellow leaf curl virus - Il OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Van Brunschot S.L., Campbell P.R., Persley D.M., Geering A.D.W., RA Thomas J.E.; RT "Tomato yellow leaf curl virus in australia: distribution, detection and RT discovery of naturally occurring defective DNA molecules"; RL Unpublished. XX RN [2] RP 1-2780 RA Van Brunschot S.L., Campbell P.R., Persley D.M., Geering A.D.W., RA Thomas J.E.; RT ; RL Submitted (05-NOV-2009) to the INSDC. RL Horticulture and Forestry Science, Queensland Primary Industries and RL Fisheries, Indooroopilly Research Centre, 80 Meiers Road, Brisbane, RL Queensland 4068, Australia XX DR MD5; de77e4d37cdcf02948cbaeceeb314c97. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="Tomato yellow leaf curl virus - Il" FT /segment="DNA A" FT /host="Solanum lycopersicum cv. Temptation" FT /strain="Australia:Brisbane3:2006" FT /isolate="BRIP49032" FT /mol_type="genomic DNA" FT /country="Australia:Corinda, Brisbane, Queensland" FT /collected_by="R. M. Osterfield" FT /collection_date="16-Mar-2006" FT /identified_by="A. D. W. Geering" FT /note="TYLCV-IL[AU:Bri3:06]" FT /db_xref="taxon:66366" FT gene 147..497 FT /gene="V1" FT CDS 147..497 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /note="CP" FT /db_xref="GOA:O92601" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:O92601" FT /protein_id="ADI56604.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 307..1083 FT /gene="V2" FT CDS 307..1083 FT /codon_start=1 FT /gene="V2" FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:D8WKT5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D8WKT5" FT /protein_id="ADI56603.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1080..1484) FT /gene="C3" FT CDS complement(1080..1484) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /note="Ren" FT /db_xref="GOA:D8WKU8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D8WKU8" FT /protein_id="ADI56605.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNNNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1225..1632) FT /gene="C2" FT CDS complement(1225..1632) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activator protein" FT /note="TrAP" FT /db_xref="GOA:D8WKU9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D8WKU9" FT /protein_id="ADI56606.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQQQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1541..2614) FT /gene="C1" FT CDS complement(1541..2614) FT /codon_start=1 FT /gene="C1" FT /product="replication initiation protein" FT /db_xref="GOA:D8WKV0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D8WKV0" FT /protein_id="ADI56607.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPVEVYFSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2170..2463) FT /gene="C4" FT CDS complement(2170..2463) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D8WKV1" FT /protein_id="ADI56608.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2780 BP; 755 A; 531 C; 610 G; 884 T; 0 other; accggatggc cgcgcctttt cctttatgtg gtccccacga gggttccaca gacgtcactg 60 tcaaccaatc aaattgcatc ctcaaacgtt agataagtgt tcatttgtct ttatatactt 120 ggtcctcaag tagtttgtct tgcactatgt gggatccact tctaaatgaa tttcctgaat 180 ctgttcacgg atttcgttgt atgttagcta ttaaatattt gcagtccgtt gaggaaactt 240 acgagcccaa tacattgggc cacgatttaa ttagggatct tatatctgtt gtaagggccc 300 gtgactatgt cgaagcgacc aggcgatata atcatttcca cgcccgtctc gaaggttcgc 360 cgaaggctga acttcgacag cccatacagc agccgtgctg ctgtccccat tgtccaaggc 420 acaaacaagc gacgatcatg gacgtacagg cccatgtacc ggaagcccag aatatacaga 480 atgtatcgaa gccctgatgt tcctcgtgga tgtgaaggcc catgtaaagt ccagtcttat 540 gagcaacggg atgatattaa gcatactggt attgttcgtt gtgttagtga tgttactcgt 600 ggatctggaa ttactcacag agtgggtaag aggttctgtg ttaaatcgat atatttttta 660 ggtaaagtct ggatggatga aaatattaag aagcagaatc acactaatca ggtcatgttc 720 ttcttggttc gtgatagaag gccctatgga aacagcccaa tggattttgg acaggttttt 780 aatatgttcg ataatgagcc cagtaccgca accgtgaaga atgatttgcg ggataggttt 840 caagtgatga ggaaatttca tgctacagtt attggtgggc cctctggaat gaaggaacag 900 gcattagtta agagattttt tagaattaac agtcatgtaa cttataatca tcaggaggca 960 gccaagtatg agaaccatac tgaaaacgcc ttgttattgt atatggcatg tacgcatgcc 1020 tctaatccag tgtatgcaac tatgaaaata cgcatctatt tctatgattc aatatcaaat 1080 taataaaatt tatattttat atcatgagtt tctgttacat ttattgtgtt ttcaagtaca 1140 tcatacaata catgatcaac tgctctgatt acattgttaa ttgaaattac accaagacta 1200 tctaaatact taagaacttg atatctaaat actcttaaga aacgaccagt ctgaggctgt 1260 aatgtcgtcc aaattcggaa gttgagaaaa catttgtgaa tccccaatac cttcctgatg 1320 ttgttgttga atcttatctg aatggaaatg atgtcgtggt tcattagaaa tggcctctgg 1380 ctgtgttctg ttatcttgaa atagagggga ttgtttatct cccagataaa aacgccattc 1440 tctgcttgag gagcagtgat gagttcccct gtgcgtgaat ccatgattgt tgcagttgat 1500 gtggaggtag tatgagcagc cacagtctag gtctacacgc ttacgcctta ttggtttctt 1560 cttggctatc ttgtgttgga ccttgattga tacttgcgaa cagtggctcg tagagggtga 1620 cgaaggttgc attcttgaga gcccaatttt tcaaggatat gtttttttct tcgtctagat 1680 attccctata tgaggaggta ggtcctggat tgcagaggaa gatagtggga attccccctt 1740 taatttgaat gggcttcccg tactttgtgt tgctttgcca gtccctctgg gcccccatga 1800 attccttgaa gtgctttaaa taatgcgggt ctacgtcatc aatgacgttg taccacgcat 1860 cattactgta cacctttggg cttaggtcta gatgtccaca taaataatta tgtgggccta 1920 gagacctggc ccacattgtt ttgcctgttc tgctatcacc ctcaatgaca atacttatgg 1980 gtctccatgg ccgcgcagcg gaagatacga cgttctcggc gacccactct tcaagttcat 2040 ctggaacttg attaaaagaa gaagaaagaa atggagaaaa ataaacttct acaggaggac 2100 taaaaatcct atctaaattt gaacttaaat tatgaaattg taaaatatag tcctttgggg 2160 ccttctcttt taatatattg agggcctcgg atttactgcc tgaattgagt gcctcggcat 2220 atgcgtcgtt ggcagattgc tgacctcctc tagctgatct gccatcgatt tggaaaactc 2280 caaaatcaat gaagtctccg tctttctcca cgtaggtctt gacatctgtt gagctcttag 2340 ctgcctgaat gttcggatgg aaatgtgctg acctgtttgg ggataccagg tcgaagaacc 2400 gttggttctt acattggtat ttgccttcga attggataag cacatggaga tgtggttccc 2460 cattctcgtg gagttctctg caaactttga tgtatttttt atttgttggg gtttctaggt 2520 tttttaattg ggaaagtgct tcctctttag agagagaaca attgggatat gttaggaaat 2580 aatttttggc atatatttta aataaacgag gcatgttgaa atgaattggt gtccctcaaa 2640 gctctatggc aatcggtgta tcggtgtctt acttatacct ggacacctaa tggctatttg 2700 gtaattttgt aaaagtacat tgcaattcaa aattcaaaat tcaaaaatca aatcattaaa 2760 gcggccatcc gtataatatt 2780 //