Dbfetch
ID GU168941; SV 2; linear; genomic RNA; STD; VRL; 1915 BP. XX AC GU168941; XX DT 03-DEC-2009 (Rel. 103, Created) DT 03-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Viola white distortion associated virus isolate Vl9 movement protein and DE coat protein genes, complete cds. XX KW . XX OS Viola white distortion associated virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus; unclassified Ilarvirus. XX RN [1] RP 1-1915 RA Ciuffo M., Turina M.; RT "Widespread occurrence of a new Ilarvirus species present in pansies RT germplasm"; RL Unpublished. XX RN [2] RP 1-1915 RA Ciuffo M., Turina M.; RT ; RL Submitted (02-NOV-2009) to the INSDC. RL Istituto di Virologia Vegetale, CNR, Strada delle Cacce 73, Torino, TO RL 10135, Italy XX RN [3] RC Sequence update by submitter RP 1-1915 RA Ciuffo M., Turina M.; RT ; RL Submitted (02-MAY-2013) to the INSDC. RL Istituto di Virologia Vegetale, CNR, Strada delle Cacce 73, Torino, TO RL 10135, Italy XX DR MD5; 57e30171ddcfd015aebb0222df16d447. XX CC On May 2, 2013 this sequence version replaced gi:269969752. XX FH Key Location/Qualifiers FH FT source 1..1915 FT /organism="Viola white distortion associated virus" FT /segment="RNA3" FT /host="Viola x wittrockiana" FT /lab_host="Nicotiana benthamiana" FT /isolate="Vl9" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="Oct-2009" FT /db_xref="taxon:694447" FT CDS 54..932 FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:D2JZZ4" FT /db_xref="InterPro:IPR002538" FT /db_xref="UniProtKB/TrEMBL:D2JZZ4" FT /protein_id="ACZ54926.1" FT /translation="MSFPGVSRTITGVVSDAGPSSSAFEVSAEDWNKVLCEVDEFYTQS FT MLKNIPTKKCFSLHIKNGVPVQPMKLQSKESRSALTKLLVKAKGHVYVHHSIIYLLYVP FT TILETTDGVLTVKLFNVNTGETIDVDTDSPLNEAAIFVARWPRAVHADDGDGIHLLVSA FT ISSGAKHASIVGTVYPFWDDSLHKKKPYEKMYPTLRFPIEKSDAVAAIEDVKILQSFAK FT SRLTGGSGSNKVDINPQLIEIKSEQGKKAKTVDFKNVIVPLSGKKVENVPLDLSRDAKP FT VTKTFDGVTIG" FT CDS 992..1639 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:N0D6Q8" FT /db_xref="InterPro:IPR002681" FT /db_xref="UniProtKB/TrEMBL:N0D6Q8" FT /protein_id="AGK84849.1" FT /translation="MSGKAVSKGKPTARSQNFARQRKMNAPLPSSPKRTSLSESSKSSE FT WRLHGPNVPVKRFTGMVSRSENLSTNSVARGEYFATQIKDLFKGHDPSTKVYGIVFRYC FT LDFSNGTFGLIKEFDVNNPTEPNPLSRRKFIKMCASGVQILAPTDVTVADIPDDLWFVI FT KYDKSFDANVPVWVRTQYLQHSMPPKIEIPDSVLMAERDSIFVDAMDKIVYG" XX SQ Sequence 1915 BP; 528 A; 359 C; 413 G; 615 T; 0 other; agggggacat tagtttgttg tgatttgaga tttatctcgt ctgatacatt accatgtctt 60 ttcctggagt ttccagaact attaccggag ttgtctctga tgctggaccc agttcctctg 120 cttttgaagt atcagcagaa gactggaaca aggttctttg tgaagtggat gagttttata 180 ctcaatctat gttaaagaat ataccgacta agaagtgctt ttctctacat ataaagaatg 240 gagtacctgt tcaacctatg aaacttcagt cgaaggagtc tcgaagtgct ttgactaaat 300 tgttagtcaa agctaaagga catgtttacg tacatcatag tattatttac ttattgtacg 360 tacccactat tctcgagact acagatggtg tgttaacagt gaaattattc aatgttaaca 420 cgggtgaaac tatagatgtt gacacggatt cgcctcttaa tgaggctgcg atctttgttg 480 ctcgatggcc tagggctgtc catgctgatg acggtgatgg tatacacctc ctagtgtcag 540 caatcagttc tggtgctaag catgcatcga tagtgggcac tgtttacccc ttttgggatg 600 attccttaca taagaagaaa ccttatgaaa agatgtatcc aactttgaga tttccgattg 660 aaaaatccga tgctgttgct gctattgaag acgtaaaaat tcttcaatct tttgccaaat 720 cccgattgac tggtgggagt ggtagcaaca aagttgacat aaatcctcag ttgattgaga 780 ttaaatcgga gcaggggaag aaagcgaaga ctgttgattt caaaaatgtc atcgttcctt 840 tgagcgggaa gaaggtagaa aatgttcctc tagatttatc tagagatgcc aaacccgtaa 900 ctaaaacgtt tgatggagta acgatcggtt gatcactttg tgatgcaact agttgtttta 960 cttttatgtg ttttaatttt attttcttcc aatgtctggg aaagctgttt ctaaaggaaa 1020 gcctactgct cgctcacaaa attttgctcg tcaaagaaag atgaatgccc ctctaccgtc 1080 ttctcctaag aggacgtctt tgagcgaaag ctcaaaaagt tctgagtgga ggcttcacgg 1140 acctaatgtt cccgtgaaga gatttaccgg aatggtttcc cgttccgaga atttgtccac 1200 caattcggtg gccaggggtg agtattttgc cacccaaatt aaagaccttt ttaaaggtca 1260 tgatccttcc actaaagtat acggaattgt tttccgttac tgtttggatt tttctaatgg 1320 gacctttggt ctcattaaag agttcgatgt taataaccct accgaaccta atcccctctc 1380 taggaggaag tttattaaaa tgtgtgccag tggtgtgcaa attcttgcac ccactgatgt 1440 taccgttgct gacataccag atgatctctg gtttgtcata aaatatgaca aaagcttcga 1500 tgctaacgta ccggtgtggg tgaggactca atacctccaa cactcgatgc ctccgaagat 1560 tgaaattccg gattccgtct taatggcgga acgagattca attttcgtgg atgcgatgga 1620 taaaatagtc tatggatgac tatatgatcc attctttgat tgttccgaca gtgctaacat 1680 ttcatttctt ccaccggaag aaatggaatt taaagcctgg cgatgctgtt attgcaatga 1740 aattcattat gtttagattt tgtctctaga tgaataaatc cttttggtta acttcgtact 1800 ttgtacatag aagttaagat aaaaatgcct actgtttcct aagtggatga cactttttat 1860 tgcctacatt tgtagatgcc cttaccgtga ggtaaggatg ccccttttgg gaagc 1915 //