ID   GU144338; SV 1; linear; genomic RNA; STD; VRL; 916 BP.
XX
AC   GU144338;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus V isolate Sam-20-PVV polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus V
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-916
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-916
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
DR   MD5; 22f3c0a813dc9234035fbc6b0044605f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..916
FT                   /organism="Potato virus V"
FT                   /host="potato, Home Guard cultivar"
FT                   /isolate="Sam-20-PVV"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:40640"
FT   CDS             <1..839
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYN8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYN8"
FT                   /protein_id="ADA57738.1"
FT                   /translation="YEGRHQAKEEASSLDAGKDPAKEKSAKLPAAAGEQSSKGLEERDV
FT                   NAGTTGTFTIPRIKAISEKMRQPKVNGVSALNFEHLLVYKPSQIDISNARATQSQFNNW
FT                   FSEVQKAYDVEAGDMGTILNGLMVWCIENGTSPNVNGVWTMMDGEEQVEFPLKPVIENA
FT                   KPTFRQIMAHFSDVAEAYIEMRNKSEPYMPRYGLVRNLRDMSLARYAFDFYEITSRTSV
FT                   RAREAHIQMKAAALKTAQTRLFGLDGGISTQEENTERHTTEDVAPNLHTMLGVRNM"
FT   mat_peptide     <1..20
FT                   /product="NIb replicase"
FT   mat_peptide     21..836
FT                   /product="coat protein"
XX
SQ   Sequence 916 BP; 288 A; 174 C; 237 G; 217 T; 0 other;
     cgtatgaagg cagacatcaa gcaaaagaag aagccagttc gcttgatgct ggaaaagacc        60
     cagcaaagga aaaatctgcg aagttacctg ccgcagccgg tgagcaatca agtaagggtc       120
     tcgaagaacg ggatgtaaat gcaggaacaa ctggcacgtt cacaatcccg cgcatcaagg       180
     cgatttctga gaaaatgcgc caaccaaagg ttaatggggt gagtgcactg aattttgagc       240
     atctgttggt ctacaaacca agccaaattg atatctctaa cgcaagggca actcagagtc       300
     aatttaataa ctggttctct gaagttcaaa aagcatacga tgttgaagct ggcgatatgg       360
     gaactatctt aaatggtttg atggtttggt gcatcgagaa tggaacatca ccgaatgtga       420
     atggagtttg gacaatgatg gatggtgagg aacaagtgga gtttccccta aaaccggtga       480
     tcgaaaatgc gaagcctact tttaggcaga taatggcaca tttttctgat gtggctgagg       540
     cgtacataga gatgcgtaac aagagtgaac catacatgcc acggtatggt ttggtgagaa       600
     atttgcggga tatgagtttg gctcgatatg catttgattt ctatgagatc acatcccgca       660
     catccgtccg agcacgagag gctcacatcc agatgaaggc agcagcactg aaaactgcgc       720
     aaactcgctt gtttggattg gatggtggca taagtacaca ggaagaaaac acagaaagac       780
     acaccacaga ggatgtggcc cccaacctgc atactatgct tggggtcagg aacatgtagc       840
     tgagtgtttt aactgggatg aaatatagct ataaatatgc agaatatagt ttggcttttc       900
     ttcgtactag cttaaa                                                       916
//