ID   GU144317; SV 1; linear; genomic RNA; STD; VRL; 997 BP.
XX
AC   GU144317;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus A isolate 139-PVA polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-997
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-997
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
DR   MD5; 802f32c3ad819b7c594d686b739a52b0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..997
FT                   /organism="Potato virus A"
FT                   /host="potato, Red Foula cultivar"
FT                   /isolate="139-PVA"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Shetland"
FT                   /collection_date="May-2008"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..828
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYL7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYL7"
FT                   /protein_id="ADA57717.1"
FT                   /translation="DMVYFQAGTLDAGETPAQKTEGRKREGEGNSGKAVAVKDKDVDLG
FT                   TAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQNWYDG
FT                   VMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDGEEQISYPLKPMLDHAKPS
FT                   LRQVMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATTPVRAK
FT                   EAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV"
FT   mat_peptide     <1..18
FT                   /product="NIb replicase"
FT   mat_peptide     19..825
FT                   /product="coat protein"
XX
SQ   Sequence 997 BP; 314 A; 194 C; 237 G; 252 T; 0 other;
     gacatggtgt atttccaagc cggaactctt gatgcaggcg aaacaccagc gcagaaaact        60
     gaaggtagga agagagaagg agaaggcaac agtggcaaag ctgttgccgt gaaggacaaa       120
     gatgtcgatt taggtactgc tgggactcat tcagtaccac gcttaaaatc aatgacatca       180
     aaactgacac taccaatgct caaaggtaag agtgttgtta acctagatca cttgctatct       240
     tacaaaccaa agcaagtaga cttgtcaaat gctagagcca cccacgaaca attccaaaac       300
     tggtatgatg gcgttatggc aagttatgag ttagaggaat caagcatgga gatcattcta       360
     aatggtttca tggtatggtg cattgagaat ggaacttctc cagacattaa tggagtttgg       420
     actatgatgg atggcgaaga gcagatatca tacccactca aacccatgct tgatcatgca       480
     aagccttctt taaggcaagt tatgaggcat ttcagtgcgc tcgcagaggc gtatattgaa       540
     atgagaagtc gtgagaaacc atacatgccc aggtatggtc ttcaacgcaa tctgagagac       600
     caaagtttgg caaggtacgc ttttgatttc tatgagatca ctgctaccac tccggtcaga       660
     gccaaagagg cgcatctgca aatgaaagct gcagcgctga agaattcgaa caccaacatg       720
     tttggactgg acggaaatgt cacaacttcg gaagaggaca cagaaaggca cacagcaacg       780
     gatgttaatc gtaacatgca tcaccttctg ggcgtgaagg gggtgtaacc gaagtgccgt       840
     actattatta tatataagag ttcctgttag tatccttgtc ctattattag aatatgtttg       900
     tctttcaaca agtacgatgt tcgtgctctc atctcgcaac agtgagtttg agtgggaaat       960
     aagtattaat attctatggc cttacttgtt atataga                                997
//