ID   GU144313; SV 1; linear; genomic RNA; STD; VRL; 1022 BP.
XX
AC   GU144313;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus A isolate Sam-21-PVA polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1022
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-1022
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
DR   MD5; d973d283178da703e69518f5e3d3d822.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1022
FT                   /organism="Potato virus A"
FT                   /host="potato, Kennebec cultivar"
FT                   /isolate="Sam-21-PVA"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..840
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYL3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYL3"
FT                   /protein_id="ADA57713.1"
FT                   /translation="QSWYDMVYFQAGTLDAGETSAQKSEGRRKEGEGNSGKAVAVKDKD
FT                   VDLGTAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQN
FT                   WYDGVMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDDEEQVSYPLKPMLDH
FT                   AKPSLRQIMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATTP
FT                   VRAKEAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV"
FT   mat_peptide     <1..30
FT                   /product="NIb replicase"
FT   mat_peptide     31..837
FT                   /product="coat protein"
XX
SQ   Sequence 1022 BP; 321 A; 194 C; 242 G; 261 T; 4 other;
     caaagctggt atgacatggt gtatttccaa gccggaactc ttgatgcagg tgaaacatca        60
     gcgcagaaat ctgaaggtag gaggaaagaa ggagaaggca acagtggcaa agctgttgcc       120
     gtgaaggaca aagatgtcga tttaggtact gctgggactc attcagtacc acgcttaaaa       180
     tcaatgacat caaaattgac actaccaatg ctcaaaggta agagtgtcgt taacctagat       240
     cacttgctat cttacaaacc aaagcaagta gacttgtcaa atgctagagc cactcacgaa       300
     caattccaaa actggtatga tggcgttatg gcaagttatg agttagagga atcaagcatg       360
     gagatcattc taaatggttt catggtatgg tgcattgaga atggaacttc tccagacatt       420
     aatggagttt ggaccatgat ggatgatgag gaacaagtgt catayccatt aaaacccatg       480
     cttgatcatg caaagccttc tttaaggcaa attatgagac atttcagcgc rctcgcagag       540
     gcgtacattg agatgagaag tcgtgagaaa ccatacatgc ccaggtatgg tcttcarcgc       600
     aacttgagag atcaaagttt ggcaaggtat gcwtttgatt tctatgagat cactgcaacc       660
     actccggtca gagccaagga ggcgcatttg caaatgaaag cagctgcgct gaagaattcg       720
     aacactaaca tgtttggact ggacggaaat gtcacaactt cggaagagga cacagaaagg       780
     cacacagcaa cggatgttaa tcgcaacatg catcaccttc tgggcgtgaa gggggtgtaa       840
     ccgaagtgcc gtactattat tatatataag agttcctgtt agtatccttg tcctattatt       900
     agaatacgtt tatctttcaa caagtataat attcgtgctc tcatctcgca atagtgagtt       960
     tgagtgggaa ataagtacta gtattctatg gccttacttg ttatatagac ccaggtctgg      1020
     gc                                                                     1022
//