ID   GU144312; SV 1; linear; genomic RNA; STD; VRL; 994 BP.
XX
AC   GU144312;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus A isolate Sam-19-PVA polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-994
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-994
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
DR   MD5; d9b92938c6dba2eec0aa341c30344dc9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..994
FT                   /organism="Potato virus A"
FT                   /host="potato, Harlequin cultivar"
FT                   /isolate="Sam-19-PVA"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..821
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYL2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYL2"
FT                   /protein_id="ADA57712.1"
FT                   /translation="YFQAGTLDAGETPAQKTEGRKREGEGNSGTAVAVKDKDVDLGTAG
FT                   THSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQNWYDGVKA
FT                   SYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDGEEQISYPLKPMLDHAKPSLRQ
FT                   VMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATTPVRAKEAH
FT                   LQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV"
FT   mat_peptide     <1..11
FT                   /product="NIb replicase"
FT   mat_peptide     12..818
FT                   /product="coat protein"
XX
SQ   Sequence 994 BP; 313 A; 197 C; 234 G; 250 T; 0 other;
     ggtatttcca agccggaact cttgatgcag gcgaaacacc agcgcagaaa actgaaggta        60
     ggaagagaga aggagaaggc aacagtggta cagctgttgc cgtgaaggac aaagatgtcg       120
     atttaggtac tgctgggact cattcagtac cacgcttaaa atcaatgaca tcaaaactga       180
     cactaccaat gctcaaaggt aagagtgtcg ttaacctaga tcacttgcta tcttacaaac       240
     caaagcaagt agacttgtca aatgctagag ccacccatga acaattccaa aactggtatg       300
     atggcgttaa ggcaagttat gagttagagg aatcaagcat ggagatcatt ctaaatggtt       360
     tcatggtatg gtgcattgag aatggaactt ctccagacat caatggagtt tggactatga       420
     tggatggcga agagcaaata tcatacccac tcaaacccat gcttgatcat gcaaagcctt       480
     ctttaaggca agttatgagg catttcagtg cgctcgcaga ggcgtatatt gaaatgagaa       540
     gtcgtgagaa accatacatg cccaggtatg gtcttcaacg caatctgaga gaccaaagtt       600
     tggcaaggta cgcttttgat ttctatgaga tcactgctac cactccggtc agagccaaag       660
     aggcgcatct gcaaatgaaa gctgcagcgc tgaagaattc gaacactaac atgtttggac       720
     tggacggaaa tgtcacaact tcggaagagg acacagaaag gcacacagca acggatgtta       780
     atcgtaacat gcatcacctt ctgggcgtga agggggtgta accgaagtgc cgtactatta       840
     ttatatataa gagttcctgt tagtatcctt gtcctattat tagaatatgt ttgtctttca       900
     acatgtacga tgttcgtgct ctcatctcgc aacagtgagt ttgagtggga aataagtact       960
     aatattctat ggccttactt gttatataga ccca                                   994
//