ID   GU144311; SV 1; linear; genomic RNA; STD; VRL; 1004 BP.
XX
AC   GU144311;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Potato virus A isolate Sam-11-PVA polyprotein gene, partial cds.
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KW   .
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OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1004
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-1004
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
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DR   MD5; e5923bcef0f805e62bc99d66303188bb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1004
FT                   /organism="Potato virus A"
FT                   /host="potato, Hermes cultivar"
FT                   /isolate="Sam-11-PVA"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..830
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYL1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYL1"
FT                   /protein_id="ADA57711.1"
FT                   /translation="DMVYFQAGTLDAGETSAQKSEGRRKEGEGNSGKAVAVKDKDVDLG
FT                   TAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQNWYDG
FT                   VMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDDEEQVSYPLKPMLDHAKPS
FT                   LRQIMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATTPVRAK
FT                   EAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV"
FT   mat_peptide     <1..20
FT                   /product="NIb replicase"
FT   mat_peptide     21..827
FT                   /product="coat protein"
XX
SQ   Sequence 1004 BP; 319 A; 193 C; 235 G; 256 T; 1 other;
     atgacatggt gtatttccaa gccggaactc ttgatgcagg cgaaacatca gcgcagaaat        60
     ctgaaggtag gaggaaagaa ggagaaggca acagtggcaa agctgttgcc gtgaaggaca       120
     aagatgtcga tttaggtact gctggractc attcagtacc acgcttaaaa tcaatgacat       180
     caaaactgac actaccaatg ctcaaaggta agagtgtcgt taacctagat cacttgctat       240
     cttacaaacc aaagcaagta gacttgtcaa atgctagagc cactcacgaa caattccaaa       300
     actggtatga tggcgttatg gcaagttatg agttagagga atcaagcatg gagatcattc       360
     taaatggttt catggtatgg tgcattgaga atggaacttc tccagacatt aatggagttt       420
     ggaccatgat ggatgatgag gaacaagtgt catatccatt aaaacccatg cttgaccatg       480
     caaagccttc tttaaggcaa attatgagac atttcagcgc actcgcagag gcgtacattg       540
     agatgagaag tcgtgagaaa ccatacatgc ccaggtatgg tcttcagcgc aacttgagag       600
     atcaaagttt ggcaaggtat gcatttgatt tctatgagat cactgcaacc actccggtca       660
     gagccaagga ggcgcatttg caaatgaaag cagctgcgct gaagaattcg aacactaaca       720
     tgtttggact ggacggaaat gtcacaactt cggaagagga cacagaaagg cacacagcaa       780
     cggatgttaa tcgcaacatg catcaccttc tgggcgtgaa gggggtgtaa ccgaagtgcc       840
     gtactattat tatatataag agttcctgtt agtatccttg tcctattatt agaatacgtt       900
     tatctttcaa caagtatgat attcgtgctc tcatctcgca atagtgagtt tgagtgggaa       960
     ataagtacta gtattctatg gccttacttg ttattataga ccca                       1004
//