ID   GU144309; SV 1; linear; genomic RNA; STD; VRL; 1005 BP.
XX
AC   GU144309;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus A isolate Sam-09-PVA polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus A
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1005
RX   AGRICOLA; IND44408955.
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-1005
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the INSDC.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
DR   MD5; f7b3786d2f55892780077be7cd26e219.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1005
FT                   /organism="Potato virus A"
FT                   /host="potato, Estima cultivar"
FT                   /isolate="Sam-09-PVA"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12215"
FT   CDS             <1..829
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D2JYK9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYK9"
FT                   /protein_id="ADA57709.1"
FT                   /translation="DMGYFQAGTLDAGETPAQKTEGRKREGEGNSGTAVAVKDKDVDLG
FT                   TAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQNWYDG
FT                   VMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDGEEQISYPLKPMLDHAKPS
FT                   LRQVMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATTPVRAK
FT                   EAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV"
FT   mat_peptide     <1..19
FT                   /product="NIb replicase"
FT   mat_peptide     20..826
FT                   /product="coat protein"
XX
SQ   Sequence 1005 BP; 316 A; 199 C; 236 G; 254 T; 0 other;
     tgacatgggg tatttccaag ccggaactct tgatgcaggc gaaacaccag cgcagaaaac        60
     tgaaggtagg aagagagaag gagaaggcaa cagtggtaca gctgttgccg tgaaggacaa       120
     agatgtcgat ttaggtactg ctgggactca ttcagtacca cgcttaaaat caatgacatc       180
     aaaactgaca ctaccaatgc tcaaaggtaa gagtgtcgtt aacctagatc acttgctatc       240
     ttacaaacca aagcaagtag acttgtcaaa tgctagagcc acccacgaac aattccaaaa       300
     ctggtatgat ggcgttatgg caagttatga gttagaggaa tcaagcatgg agatcattct       360
     aaatggtttc atggtatggt gcattgagaa tggaacttct ccagacatca atggagtttg       420
     gactatgatg gatggcgaag agcaaatatc atacccactc aaacccatgc ttgatcatgc       480
     aaagccttct ttaaggcaag ttatgaggca tttcagtgcg ctcgcagagg cgtatattga       540
     aatgagaagt cgtgagaaac catacatgcc caggtatggt cttcaacgca atctgagaga       600
     ccaaagtttg gcaaggtacg cttttgattt ctatgagatc actgctacca ctccggtcag       660
     agccaaagag gcgcatctgc aaatgaaagc tgcagcgctg aagaattcga acactaacat       720
     gtttggactg gacggaaatg tcacaacttc ggaagaggac acagaaaggc acacagcaac       780
     ggatgttaat cgtaacatgc atcaccttct gggcgtgaag ggggtgtaac cgaagtgccg       840
     tactattatt atatataaga gttcctgtta gtatccttat cctattatta gaatatgttt       900
     gtctttcaac atgtacgatg ttcgtgctct catctcgcaa tagtgagttt gagtgggaaa       960
     taagtactaa tattctatgg ccttacttgt attatagacc cacat                      1005
//