ID GU136803; SV 1; circular; genomic DNA; STD; VRL; 2763 BP. XX AC GU136803; XX DT 18-NOV-2009 (Rel. 102, Created) DT 18-NOV-2009 (Rel. 102, Last updated, Version 1) XX DE Chilli leaf curl virus isolate India:Amritsar:Papaya:2009 segment DNA A, DE complete sequence. XX KW . XX OS Chilli leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2763 RA Pasumarthy K., Hussain S., Mukherjee S.K.; RT "Identification of monopartite Chilli leaf curl virus infection in Papaya RT in northern India"; RL Unpublished. XX RN [2] RP 1-2763 RA Pasumarthy K., Hussain S., Mukherjee S.K.; RT ; RL Submitted (25-OCT-2009) to the INSDC. RL Plant Molecular Biology, International Centre for Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; be4b7a68699bd57fc1c787d973c200a7. XX FH Key Location/Qualifiers FH FT source 1..2763 FT /organism="Chilli leaf curl virus" FT /segment="DNA A" FT /host="papaya" FT /isolate="India:Amritsar:Papaya:2009" FT /mol_type="genomic DNA" FT /country="India:northern" FT /collection_date="11-Sep-2009" FT /db_xref="taxon:172278" FT stem_loop join(2743..2763,1..13) FT gene 147..512 FT /gene="AV2" FT CDS 147..512 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:D1MEM9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D1MEM9" FT /protein_id="ACY72167.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICQPCCCPHCPRHKGKGMGQQAHEQ FT EAQDVQDVQEPRCSKGV" FT gene 307..1077 FT /gene="AV1" FT CDS 307..1077 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /db_xref="GOA:D1MEN0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D1MEN0" FT /protein_id="ACY72169.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1074..1478) FT /gene="AC3" FT CDS complement(1074..1478) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:B5THK3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5THK3" FT /protein_id="ACY72168.1" FT /translation="MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFLRNHDI FT ITVQIRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVYKYLNNFAVISINN FT VLRAVNHVLWNVLAQTIHVQSSNIIKFNLY" FT gene complement(1219..1623) FT /gene="AC2" FT CDS complement(1219..1623) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:D1MEN2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D1MEN2" FT /protein_id="ACY72170.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTMRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREFRVYLGDNKSPVFQDNRAPQPAIPEEPRHHHRADTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT gene complement(1526..2611) FT /gene="AC1" FT CDS complement(1526..2611) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:D1MEN3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D1MEN3" FT /protein_id="ACY72171.1" FT /translation="MAPPKRFQIYAKNYFLTYPQCSLTKEEALSQLQNLSTPTNKLFIR FT VSRELHENGEPHLHVLIQFEGKFKCQNNRFFDLVSPTRPAHFHPNIQGAKSSSDVKAYV FT EKDGDFIDFGVFQIDGRSARGGQQSANDAYAEAINSGSKAAALNILREKAPKDFVLQFH FT NLNANLDRIFTPPLEVYVSPFTSSSFDQVPEEFDVWAAENVLGAAARPLRPISIVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQAGQEGDHASSG" FT gene complement(2161..2460) FT /gene="AC4" FT CDS complement(2161..2460) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D1MEN4" FT /protein_id="ACY72172.1" FT /translation="MRMGNLIYTSSYNSKVNSNARTTDSSTSFPQPDQHISIRTFRELK FT ARQMSRPMWRKTETSLILEFSKSMADQLEEVSSLPTTHMPRQSIQGPKLRPSIY" FT regulatory 2672..2679 FT /regulatory_class="TATA_box" XX SQ Sequence 2763 BP; 751 A; 562 C; 645 G; 805 T; 0 other; accggatggc tgcgattttt ttttatgtgg gccccaccgc gcacgtgctg acaaagacat 60 gtgcaccaat taaaatcgtc cctcatagct taattattgc atggtccccc ctataaactt 120 gggttccaag tagtgcactc ttaccaatgt gggatccatt agtaaacgag tttcctgaaa 180 ccgttcacgg ttttaggtgt atgttagcag ttaaatatct gcagctagta gaaaatacat 240 attccccaga cactctgggc tacgatttaa tcagggatct aatttcagtt attagggcta 300 gaaattatgt cgaagcgacc agcagatata atcatttcca cgcccgcttc gaaggtacgc 360 cgccgtctca acttcgacag cccatatgcc agccgtgctg ctgcccccat tgtccgcgtc 420 acaaaggcaa gggcatgggc caacaggccc atgaacagga agcccaggat gtacaggatg 480 tacaggagcc cagatgttcc aagggggtgt gaaggcccat gtaaggtcca gtcttttgag 540 tctagacacg atgtagttca tatagggaag gttatgtgta ttagtgatgt tacccgtggt 600 actgggttaa cccatagagt aggtaagcgt ttctgtgtta agtctgtgta tgtattaggg 660 aagatatgga tggatgagaa tatcaagact aagaatcaca cgaatagtgt gatgttcttc 720 cttgtccgtg atcgtcgtcc tgttgataaa ccacaagatt ttggagaggt gttcaacatg 780 tttgacaacg agcctagcac tgccactgtg aagaatatgc atagagatcg ttatcaggta 840 ttgaggaaat ggcacgcaac ggttactggt ggacagtacg cgtcgaagga acaggcatta 900 gttaagaagt tcgttagggt taataattat gttgtgtata accagcagga agctggtaaa 960 tatgagaatc ataccgagaa tgcattgatg ttatacatgg cgtgtaccca cgcctctaat 1020 cctgtgtatg ctaccttaaa gatacggatc tatttctatg attcagtatc gaattaataa 1080 agattgaatt ttattatatt tgaactttgt acatgaattg tttgtgctaa tacattccat 1140 aatacatggt tgacagctct aagtacattg tttatactaa ttacagcaaa attatttaaa 1200 tacttataca cttgggtcct aaataccctt aagaaatgac cagtctgagg ctgtaaggtc 1260 gtccagattc ggaaggttag aaaacatttg tgtatcccca acgctttcct caggttgtga 1320 ttgaaccgta tctgcacggt gatgatgtcg tggttcctca ggaatggccg gttgtggtgc 1380 tcggttatct tgaaatacag gggatttgtt atctcccaga taaacacgga attctctgct 1440 tgagctgcag tgatgggttc ccctgtgcgt gaatccatag ccgtggcagc gtaatgcgat 1500 gaaatatgaa caaccgcagt ctaggtcaac ccgacgacgc atggtcccct tcttggccag 1560 cctgtgctgc actttgattg gaacctgagt agagtgggcc ttcgagggtg atgaaggtcg 1620 cattctttaa agcccaattt ttgagtgcgc tatttttctc ttcatccaag aactctttat 1680 agctagaatt gggtcctgga ttgcagagga agatagcggg aattccacct ttaatttgaa 1740 ctggctttcc gtactttgta tttgattgcc agtccctttg ggcccccatg aattccttaa 1800 agtgctttag gtagtgcgga tcaacgtcat caatgacgtt gtaccaggcg tcattactgt 1860 agacctttgg gctaaggtct agatgtccac acaaatagtt gtgtggaccc aacgaccgag 1920 cccacatcgt cttccccgtt ctactctcac cctctatgac aatacttatg ggtcttaatg 1980 gccgcgcagc ggcaccgaga acattctcgg cagcccatac gtcaaattcc tcgggaactt 2040 gatcaaaaga agaagaagta aaaggagaaa cataaacctc caacggaggt gtaaaaatcc 2100 tatctaaatt agcatttaaa ttatgaaatt gtaatacaaa atctttggga gctttctccc 2160 ttaatatatt gagggccgca gctttggacc ctgaattgat tgcctcggca tatgcgtcgt 2220 tggcagactg ctgacctcct ctagctgatc tgccatcgat ttggaaaact ccaaaatcaa 2280 tgaagtctcc gtctttctcc acataggcct tgacatctga cgagctttta gctccctgaa 2340 tgttcggatg gaaatgtgct ggtctggttg gggaaacgag gtcgaagaat ctgttgttct 2400 ggcatttgaa tttaccttcg aattgtatga ggacgtgtag atgaggttcc ccattctcat 2460 gtaattcgcg agaaaccctg atgaataatt tattagtggg ggtgcttagg ttttgaagtt 2520 gggaaagtgc ctcttcttta gtgagggaac actgtggata tgttaagaaa taatttttag 2580 catatatttg aaaacgtttt ggaggagcca ttttgacttg gtcaattggt actcaacaaa 2640 cttggctatg caatcggtga atggtactca atatatagtg tgagtaccaa atggcatagt 2700 cgtaattttg gaagaaagtt caaaattcaa attccgacaa aagcggccat ccgcactaat 2760 att 2763 //