ID   GU120176; SV 1; linear; genomic RNA; STD; VRL; 894 BP.
XX
AC   GU120176;
XX
DT   31-JAN-2011 (Rel. 107, Created)
DT   03-FEB-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Shallot latent virus isolate Sao Manuel/SP coat protein gene, complete cds.
XX
KW   .
XX
OS   Shallot latent virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-894
RX   DOI; .1094/PDIS-08-10-0599.
RX   PUBMED; 30743437.
RA   Mituti T., Marubayashi J.M., Moura M.F., Krause-Sakate R., Pavan M.A.;
RT   "First Report of Shallot latent virus in Garlic in Brazil";
RL   Plant Dis. 95(2):227-227(2011).
XX
RN   [2]
RP   1-894
RA   Mituti T., Marubayashi J.M., Moura M.F., Krause-Sakate R., Pavan M.A.;
RT   ;
RL   Submitted (16-OCT-2009) to the INSDC.
RL   Plant Protection, UNESP/FCA, Rua Jose Barbosa de Barros, 1780, Botucatu, SP
RL   18610307, Brazil
XX
DR   MD5; 8578dafbcb8df38b32150c9a8aeb121e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..894
FT                   /organism="Shallot latent virus"
FT                   /host="garlic"
FT                   /isolate="Sao Manuel/SP"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="02-Jul-2008"
FT                   /db_xref="taxon:12172"
FT   CDS             1..894
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP; capsid protein"
FT                   /db_xref="GOA:E9JGN8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:E9JGN8"
FT                   /protein_id="ADB22530.1"
FT                   /translation="MTNEEEELNRVKNLPMRDPGTLPDGERSKAVNDVGVMEREGFEAV
FT                   LRRSESRFNKLKEKCMADLSSINVTNCGWESGRPKAQLADSLKGDASNIFTRPSMDALL
FT                   VRNYAPESNNLATAEELAKISAKVQALGAPEECLAEVFWDICMYCTTAGSSPNVNPKGT
FT                   ISVGGKVVTRDMVVAVIKEYSTLRQVCRCYAPVVWNYMLLNEHPPANGDAEGVTENTKY
FT                   AAFDTFDAVTNKAAIQPLKGLIRAPTDAERIAFATHKKLALAKNSQNSRYANTSAEVTG
FT                   GFFGCFPKNNFRESRC"
XX
SQ   Sequence 894 BP; 247 A; 205 C; 236 G; 206 T; 0 other;
     atgacaaacg aagaagaaga actcaacaga gttaagaatt tgcccatgcg cgacccgggg        60
     acactacccg atggggaacg cagtaaggcc gtcaatgatg ttggtgttat ggaacgtgaa       120
     ggcttcgaag ccgtccttcg tagaagtgaa agtagattca acaaacttaa agagaagtgc       180
     atggctgatt tatctagcat taatgtgacg aattgtggat gggaatccgg acgcccgaaa       240
     gctcagctcg cagatagtct taaaggggat gcttcaaata ttttcacccg tccctccatg       300
     gatgcgcttt tggtacggaa ctacgcacct gagagtaata atctggcgac cgccgaggaa       360
     ttggcgaaaa tatccgctaa agtgcaggct ctaggcgcac cggaagagtg ccttgctgaa       420
     gtgttctggg acatttgcat gtattgcacc acagccggga gttcgcccaa tgtgaaccct       480
     aaagggacca tctctgtcgg tggtaaggtt gtaactaggg acatggtggt cgccgtcatt       540
     aaggaatact caacgctacg acaggtttgc cgttgttacg cgcccgttgt ttggaattac       600
     atgttattga atgagcaccc gcccgctaat ggggacgcgg agggggtcac tgagaacact       660
     aaatatgccg cttttgatac tttcgatgcg gtaactaaca aagctgcaat ccaaccgctg       720
     aaaggcctga taagggcccc gactgacgct gaacgcatcg ctttcgcgac tcacaagaag       780
     ttggcccttg cgaagaattc acaaaattcc cgatacgcca acacctctgc tgaagtcact       840
     ggaggattct tcggatgctt tcctaaaaac aactttagag aaagtcgatg ttga             894
//