ID GU112504; SV 1; linear; genomic RNA; STD; VRL; 2875 BP. XX AC GU112504; XX DT 18-NOV-2009 (Rel. 102, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Impatiens necrotic spot virus isolate HDL segment S, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2875 RX DOI; 10.1094/PDIS-94-4-0484C. RX AGRICOLA; IND44357612. RA Liu Y.T., Zheng Y.X., Li Y.Z., Li Z.Y.; RT "First Report of Impatiens necrotic spot virus on Spiderlily in China"; RL Plant Dis. 94(4):484-484(2010). XX RN [2] RP 1-2875 RA Liu Y.T., Zheng Y.X., Li Y.Z., Li Z.Y.; RT ; RL Submitted (15-OCT-2009) to the INSDC. RL Biotechnology, Yunnan Agricultural University, Jinhei Road, Kunming, Yunnan RL 650201, China XX DR MD5; 757672238c6f9a35147786d27742e323. DR EuropePMC; PMC4755677; 26889117. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..2875 FT /organism="Impatiens necrotic spot virus" FT /segment="S" FT /host="Hymenocallis littoralis (spiderlily)" FT /isolate="HDL" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="24-Jul-2009" FT /db_xref="taxon:11612" FT CDS 63..1412 FT /codon_start=1 FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:D1LZX6" FT /protein_id="ACY71047.1" FT /translation="MSSAMYETIIKSKSSIWGTTSSGKAVVDSYWIHDQSSGKKLVEAQ FT LYSDSRSKTSFCYTGKVGFLPTEEKEIISENVFVPIFDDIDLNFSFSGDVVEILVRSNT FT TNTNGVKHQGHLKVLSSQLLRMFEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGSLS FT CVKEVLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVKSLA FT MSATSDLMSDTHSFVRLNNNKPFKISLWMRIPKIMKSNTYSRFFTLSDESSPKEYYISI FT QCLPNHNNVETALNLTLISKPLLESTPSSSDHKIEMNFSDLKEPYNVIHDMSYPQRIVH FT SLLEIHTELAQTICDSVQQDIIVFTINEPDLKPKKFELGKKTLNYSEDGYGRKYSLSQT FT LESLPRNSQTMSYLDSIKMPDWKFDYAAGEIKISPRSEDVLKAISKLDLN" FT CDS complement(2031..2819) FT /codon_start=1 FT /product="nucleocapsid protein" FT /db_xref="GOA:Q76D17" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q76D17" FT /protein_id="ACY71048.1" FT /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKI FT QNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAMVR FT VHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASVLNF FT EIASLVLAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYSMNSVEIGKAKQYADI FT LKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI" XX SQ Sequence 2875 BP; 948 A; 512 C; 430 G; 985 T; 0 other; gaacaaccaa gctacaacaa atcttacaat attgtcaatt acattactac ttccatttta 60 acatgtctag tgcaatgtat gaaacaatta tcaaatcgaa gtcctcaatc tggggaacaa 120 catcttcggg taaagcagta gtagatagtt attggattca tgatcaatct tccggaaaga 180 agttggtcga agctcaactc tattctgact ccaggagcaa gaccagtttc tgttacactg 240 gtaaagttgg ctttctccca acagaagaaa aagaaattat aagtgagaat gtttttgtgc 300 ctatttttga tgacattgat ctgaatttct ccttttcagg agatgttgtc gaaattctgg 360 tcagatctaa cacaacaaac acaaacggtg ttaagcatca aggccatctc aaagtgttat 420 cctctcagtt gctcagaatg tttgaagagc aaatagcagt gcctgaaatt acttcaagat 480 tcggtctgaa agaatctgac atcttccctc caaataattt cattgaagct gcaaataaag 540 gatcattgtc ttgtgtcaaa gaagttcttt ttgatgtcaa gtattcaaac aaccaatcca 600 tgggcaaagt cagtgttctt tctcccacca gaagtgttca tgaatggctg tacacactta 660 agcctgtttt taaccaatcc cagaccaaca acaggacagt aaacactttg gctgtaaaat 720 cactggcaat gtctgcaact tctgacttaa tgtcagatac tcattcattt gtcaggctca 780 ataataacaa gccctttaaa atcagccttt ggatgcgcat ccctaaaata atgaaatcaa 840 acacatacag ccggttcttc accctgtctg atgaatcttc tcctaaagag tattatataa 900 gcattcaatg tcttccaaat cacaacaatg ttgaaacagc attgaatcta actttgatca 960 gcaaacctct tcttgaatca actccttcta gcagtgatca taaaattgag atgaattttt 1020 ctgacctaaa agaaccttac aatgttatcc atgatatgtc atatcctcaa agaattgttc 1080 attcacttct tgaaatccac acagaacttg ctcaaactat ctgtgacagt gttcagcaag 1140 acataattgt cttcactata aatgagccag atctaaagcc aaagaagttt gagctaggga 1200 aaaagacttt aaattattca gaagatggtt atgggagaaa atattccctt tctcagacct 1260 tggaaagtct tccaagaaac tcacaaacaa tgtcttattt ggatagcatc aagatgcccg 1320 attggaaatt tgactatgct gcaggtgaaa taaaaatttc tcctaggtca gaggatgttt 1380 tgaaagctat ttctaaatta gatttaaatt aaacttggtt aaacttgttc ctaagtaaag 1440 tttgtttaca tgcatttaga tcagatcaaa caaatctaat aacagataaa ccaaaaacaa 1500 tcatatgaaa taaataaata aacataaaat atataaaaaa tacaaaaaat cataaaataa 1560 taaaaaaacc aaaaaagatg ccttcgggca caatttggct gcttttaaat aaatgcttta 1620 aaatgaatgt attagtaaat tataaacttt aaatccaatc tactcacgaa tttggccaaa 1680 atttgttttt gtttttttgt gtttttttgt ttttttgttt tttgtttttg ttttgtttta 1740 tttgtttttt atttgttttt gtttttttgt tttattttta tttatatata tatatatata 1800 tattttttag ttgtttttat tgtttttatt attttttgta gcttttttat tgtttatttc 1860 acacgcaaac cctttttagt ttatatatta aaacacacat taaacttatt tcaaataatt 1920 tataaaagca cacttaatac actcaaacaa taattaatta tttttatttt tatttttatt 1980 tatttaaatg catttaacac aacacaaagc aaaccaagct taaatctctt ttaaatagag 2040 tcatttttcc caaaatcaat agtagcatta aacatgctgt aaatggatgt aagcccttct 2100 ttgtagtggt ccattgcagc aagtccttta gcttttggac tacaagcctt tagtatatct 2160 gcatattgtt ttgccttacc aatttcaaca gagttcatgc tatatccttt gctttttaga 2220 actgtgcaca cttttccaac tgcctcttta gtgctaaact tagacatgtc aattccaagc 2280 tcaacatgtt tagcatcttg ataaatagcc agaactagtg aagctatttc aaaattcagt 2340 acagatgcta tcagaggaag acttcctcct aagagaacac ccaagacaca agatttcaaa 2400 tctgtggttg caagaccata tgaggcaatc agagggtgac ttggaaggct gtttatagct 2460 tcagtcaggg cagatccatt gtcctttatc attccaacaa gatgaactct aaccattgca 2520 tcaagtcttc gaaaagtcat atcattgact ccaactcttt ctgaattgtt tctagttttc 2580 ttaattgtga ctgatccaaa agtgaagtca gcactcttaa tgactctcat tatagattgc 2640 ctattcttga ggaaggatag gcaagatgca gtagtcatgt tctgaatctt ttcacggttg 2700 ttggtaaaga agtcagtgaa attgaaagat ccttcatttt gagtttcctc aaattctaag 2760 gaatcagatt gagtcaaaag cttgactatg ttctccttgg taatctttgc tttgttcatc 2820 ttgatctgct gactttacta actttaaagc ttaaagtgtt caaaattact aaaaa 2875 //