ID GU112503; SV 1; linear; genomic RNA; STD; VRL; 4948 BP. XX AC GU112503; XX DT 18-NOV-2009 (Rel. 102, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Impatiens necrotic spot virus isolate HDL segment M, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4948 RX DOI; 10.1094/PDIS-94-4-0484C. RX AGRICOLA; IND44357612. RA Liu Y.T., Zheng Y.X., Li Y.Z., Li Z.Y.; RT "First Report of Impatiens necrotic spot virus on Spiderlily in China"; RL Plant Dis. 94(4):484-484(2010). XX RN [2] RP 1-4948 RA Liu Y.T., Zheng Y.X., Li Y.Z., Li Z.Y.; RT ; RL Submitted (15-OCT-2009) to the INSDC. RL Biotechnology, Yunnan Agricultural University, Jinhei Road, Kunming, Yunnan RL 650201, China XX DR MD5; 37666b639e8a0065b4cedc0eb5753a4c. DR EuropePMC; PMC4755677; 26889117. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..4948 FT /organism="Impatiens necrotic spot virus" FT /segment="M" FT /host="Hymenocallis littoralis (spiderlily)" FT /isolate="HDL" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="24-Jul-2009" FT /db_xref="taxon:11612" FT CDS 86..997 FT /codon_start=1 FT /product="non-structural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:D1LZX4" FT /protein_id="ACY71045.1" FT /translation="MNSLFKSLRSSSSRELDHPRVATTLSKQGADIVVHNPSANHNNKE FT VLQRAMDSSKGKILMNNTGTSSLGTYDSDQISESESYDLSARMIVDTNHHISSWKNDLF FT VGNGDKAATKIIKIHPTWDSRKQYMMISRIVIWICPTIADPDGKLAVALIDPNKSVNAR FT TVLKGQGSIKDPICFVFYLNWSIPKVNNTSENCVQLHLLCDQVYKKDVSFASVMYSWTK FT EFCDSPRADLDKSCMIIPINRAIRAKSQAFIEACKLIIPKGNSEKQIRRQLAELSANLE FT KSVEEEENVTDNKIEISFDNEI" FT CDS complement(1461..4862) FT /codon_start=1 FT /product="G2-G1 polyprotein" FT /db_xref="GOA:D1LZX5" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:D1LZX5" FT /protein_id="ACY71046.1" FT /translation="MKILKMCELLIKISVCTLVVTSVILSFMALKETDAKIHVERGDHP FT EIYDEAYYDRSVDHKNEILDTLAEMLQNATGKTLRPTRDTQTVLANNEVPQSPSGLSST FT PTTISVMDLPNPCLNASSLTCSIKGVSTFNVYYQVESNGVIYSCISDTITKLGNCEGSS FT ELPRSFETVPVVPITKIDNKRKLSIGTKFYIIESLENYNYPIMYNSRPTNGTVSLQSVK FT FSGDCKISKTNIVNSYTVSLTTPEKIMGYVVKREGSDMSHSIISFSGSVSLTFTEENMD FT GKHNLLCGDKSSKVPLVDKRVRDCIIKYSKNIYKQTACINFSWLRLIIIALIVYFPIRY FT LVNKTSKTLFLWYDLLGLITYPILLLINYLWSYFPLKCKVCGNLCLVTHECSKLCICNK FT NKASEEHSEECPIITRTAEKNKKYNWASIEWFHLIVNTKISLSFLKAVTETLIGFLILS FT QMPMSMAQTAQCLDSCYYVPGCDRFVTNRYDKCPEKDQCFCAIKENSIVESNFLTNVVT FT EGPMDCIPYQECKGRITENALVTFVKCRFGCEYASIFQSKPLDNGFLEYSGDTLGLNAV FT NLHFMKRLRNGIIDFYNKTEKYGYISGDALKSNESDIPESIFPRKSLIFDSMIDGKYRY FT MIEESLLSGGGTVFSLNDKSSSTAQKFVVYIKKVGIQYDVSEQYTTAPIQSTHTDFFST FT CTGKCSDCRKEQPITGYQDFCITPTSYWGCEEVWCLAINEGATCGFCRNVYDMDQSFRI FT YSVIKSTIKSEVCISGFVGAKCFTVSEEVPSESGYFQADILADFHNDGLTIAHGPDSHV FT YAGNIARLNDPSKMFGHPQLSHQGDPIFSKKTLDTNDLSWDCSAIGKKTVTIKSCGYDT FT YRFKTGLNQISDIPVQFTDQNSFYMEKIFSLGKLKIVLDLPSELFKTVPKKPILSSVSL FT SCKGCFLCSQGLRCAASFISDITFSARLTMRQCSLSTYQIAVKKGANKYNLTMFCTSNP FT EKQKMIIEPEGDKSYSVEALVDSVTVLEPENIIDQNDQYAHEEQQYNSDTSVWSFWDYV FT KSPFNFIASHFGSFFDTVRVILLILFVFALAYLCSIVATMCRGYVRNKSYKTKYIEDIN FT DYSLVSTSSGRDTITRRRPPLDFSGI" XX SQ Sequence 4948 BP; 1657 A; 843 C; 814 G; 1634 T; 0 other; agagcaatca gtgcatcaaa attatatcta gccgaattca atcattatct tctcaatatt 60 ttaattctta atctaccgtc cagagatgaa tagtttgttc aaatcgctca gatcatctag 120 cagcagggag ctagatcacc ctagggttgc aactacccta tctaaacaag gagcagacat 180 tgttgtacac aacccttctg ctaaccataa caacaaggaa gttctccaaa gagccatgga 240 tagctctaaa ggaaagattt tgatgaacaa tacaggcacc tcatcactag gcacatatga 300 ttctgaccag atatctgaat cagagtcgta tgatctttct gctagaatga ttgttgatac 360 aaatcatcat atctccagct ggaaaaatga tctttttgta ggtaatggtg ataaagctgc 420 aaccaagata attaagatac atccaacctg ggatagcaga aaacaataca tgatgatctc 480 aaggatagtt atctggatat gccctactat agctgatcct gatgggaaat tggctgtagc 540 tttaattgat cctaacaaga gtgttaatgc cagaactgtt ttgaaagggc aaggaagcat 600 taaagatcct atatgttttg ttttttatct aaattggtcc attccaaaag ttaacaacac 660 ttcagaaaat tgtgttcagc ttcatttatt atgtgatcaa gtttacaaga aagatgtctc 720 atttgctagt gtcatgtatt cttggacaaa agaattctgt gattcaccaa gagcagatct 780 ggataaaagc tgcatgataa tacccatcaa tagagctatt agagccaaat cgcaagcctt 840 cattgaagcc tgcaagttaa tcatacctaa aggcaattct gaaaagcaaa ttagaagaca 900 actagcagag ctaagtgcca atttagagaa atctgttgaa gaagaggaga atgttactga 960 taacaagata gagatatcat ttgataatga aatctaaata tgttttcatt taataataaa 1020 taatatatat tgttcacaat gtattgaatg tttaagtaaa caataaagca agataaaact 1080 atatatgtat atatatatag aaatataaaa tatatatgta tttgtgttta aaacaaatca 1140 aaacaaaaaa gagaaaaaaa gaaaataaaa caaaaaacaa aaacaaaaac taaaacaaac 1200 aaaaagcaaa aaatagaaaa aagaagaaaa aaccaaaaaa attgtaaata aataaggctc 1260 cggccagatt tggtctaaga cctttttatt tgtttttata cattttattt gtttttgttg 1320 gttttatttt ttattatttt tatattttta tatagtttgc ttatttaaca cttatttaga 1380 caaattaaat tttatttgat tacaattatt ctaccttatt taatttagaa cacatttggt 1440 gtatattcca atgaatttaa tcatataccg ctgaagtcta gaggaggtct tcttctagtg 1500 atggtgtctc taccagaaga tgtggaaacc agagaataat cattaatgtc ttcaatatat 1560 tttgtcttgt aagacttgtt tctaacatag cctctacaca ttgtggcaac aatagagcag 1620 aggtaagcaa gagcaaatac aaagagtatg agcaatatta ccctgactgt atcaaagaag 1680 gatccaaagt ggcttgctat aaagttaaaa gggcttttaa catagtccca aaagctccaa 1740 actgatgtgt cagaattata ttgctgttcc tcgtgtgcat attggtcatt ttgatcaatt 1800 atgttttctg gttccagcac agtaacagaa tctacaagtg cctcaactga gtatgatttg 1860 tctccttctg gttctataat cattttttgt ttttctgggt tagaagtgca gaacattgtc 1920 aagttatact tattagcacc tttctttact gctatctggt atgttgacaa tgaacattgt 1980 ctcatggtta acctagcaga aaaagttatg tctgatatga atgaggcagc acacctcagc 2040 ccttggctac ataagaaaca tcccttacag cttaaagaga cagaactcaa tataggcttt 2100 tttggtacag ttttaaacaa ttcagaaggt agatccaaaa caattttaag cttacctaga 2160 ctaaagatct tttccatata aaaactattc tggtcagtaa actgaactgg aatatctgat 2220 atttggttca aacctgtttt aaatctgtat gtgtcataac cgcatgattt tattgtaact 2280 gtttttttac caattgctga acaatcccag gacagatcgt ttgtatctaa tgttttctta 2340 gagaaaatgg gatcaccttg gtgtgaaagt tgaggatgac caaacatttt tgatggatca 2400 tttaatctag ctatgtttcc tgcatataca tgactatcag gtccatgagc tattgttaaa 2460 ccatcattat ggaaatccgc taatatatca gcctggaaat atcctgattc agatgggact 2520 tcctcagata cagtgaaaca ctttgctccc acaaatccag atatacatac ttcagacttg 2580 attgttgatt taataacaga ataaatcctg aaagattgat ccatatcata cacatttcta 2640 caaaacccac aagtggctcc ttcattgata gccaaacacc aaacctcttc acaaccccag 2700 taagatgttg gtgttatgca gaaatcttga tacccagtta ttggttgttc ttttctgcaa 2760 tctgagcatt tacctgtgca tgttgaaaag aaatcagtgt gggtgctttg tataggagct 2820 gtagtgtatt gttcagaaac atcatactgt attccaactt ttttaatata aacaacaaac 2880 ttctgagcag tgctggaact tttgtcatta agagagaaaa ctgtgcctcc acctgataat 2940 aaagattctt ctatcatgta tctatatttt ccatctatca tcgagtcaaa tatgagagat 3000 tttcttggga aaatgctttc aggtatgtct gattcattag atttaagtgc atctccagaa 3060 atgtatccat atttttcagt tttattgtag aaatcaatta taccattcct aagccttttc 3120 atgaagtgga gattcacagc attcaaaccc aatgtgtcac cagaatattc taagaaccca 3180 ttatctaaag gcttgctttg gaaaatagag gcatactcac aaccaaatct gcatttgaca 3240 aaagttacca aagcattttc agttatccta cctttgcatt cttgataagg tatacaatcc 3300 ataggacctt ctgtcacaac attggttaga aagttagatt ctacaataga attttcttta 3360 atagcacaga aacactggtc cttttcagga catttgtcat atctgtttgt aacaaagcgg 3420 tcacaaccag ggacataata acagctatcc aaacactgag cagtttgagc catagacata 3480 ggcatctgtg acaaaatcag aaatcctatc aaagtttctg tgactgcttt taggaaagag 3540 aggcttattt ttgtattaac tatcaaatgg aaccattcga tgctagccca gttgtatttc 3600 ttattcttct ctgctgttct agttattata ggacattctt ctgagtgttc ttcagaggct 3660 ttgtttttgt tacaaataca taattttgag cattcatggg ttaccaaaca taaatttcca 3720 cagaccttac atttcaaggg aaaataagac cataaataat ttatcagtag tagtatagga 3780 tacgttatca atcccagaag atcataccat agaaacagtg ttttagatgt tttatttacc 3840 aagtacctta tagggaaata gacaatcaga gcaattatga tcaatctaag ccatgagaag 3900 ttgatgcaag cagtttgttt gtaaatattt ttggagtact ttataataca atctctaact 3960 cttttatcca ccaaaggaac tttagaagat ttgtcaccgc acaataggtt atgcttacca 4020 tccatatttt cttctgtgaa agtcaaacta actgagccgg agaagcttat tatagaatga 4080 ctcatgtcac ttccttctct tttgacgaca taacccatga ttttctcggg tgtagttaat 4140 gaaactgtat aagaattaac tatgtttgtt tttgatattt tacaatcacc tgagaatttc 4200 acactctgga gagagactgt gccattagtt ggtctagaat tgtacatgat tggataattg 4260 taattctcca aactttcaat tatataaaat ttagttccta tagataattt ccttttgtta 4320 tcaatttttg ttattggtac aactggaaca gtttcaaagc ttcttggcaa ttcagaagat 4380 ccttcacagt ttcccaattt agttatagtg tcactgatac atgaatatat aacaccattg 4440 ctttctactt ggtaataaac attgaatgtt gaaactcctt taatgctaca agtcaaactt 4500 gaagcattta ggcatggatt tggtaaatcc ataactgata tagttgttgg tgtagaagac 4560 aatccacttg gagattgagg tacctcatta ttggcaagaa cggtttgagt atctcgtgtt 4620 ggtctaaggg ttttacctgt tgcattctgg agcatttcag ccaaagtatc tagaatttca 4680 tttttatgat cgacagaacg gtcataataa gcttcatcat aaatttctgg atgatcgccc 4740 ctttcaacat gaatctttgc atctgtctcc tttaatgcca taaaagataa gataacagaa 4800 gtaacaacta gtgtacatac actaatttta ataagtaact cgcacatctt tagaattttc 4860 attctaaaaa gtcgaataac actagttcta aaattgcttt atgagtttga tctgttgtat 4920 gtagagtttt gtttgcactg attgctct 4948 //