ID GU112086; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC GU112086; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus [India:Guntur:OY136B:2006] segment DNA-A, DE complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus [India:Guntur:OY136B:2006] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RX DOI; 10.1007/s11262-012-0732-y. RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (09-OCT-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; fa6767991507c0c7b0fbf03a0dd630e1. DR EuropePMC; PMC3824786; 28324417. XX CC GenBank Accession Numbers GU112086-GU112087 represent the complete CC genome of Tomato leaf curl New Delhi virus CC [India:Guntur:OY136B:2006]. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Tomato leaf curl New Delhi virus FT [India:Guntur:OY136B:2006]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY136B" FT /mol_type="genomic DNA" FT /country="India:Guntur, Andhra Pradesh" FT /isolation_source="infected leaf" FT /collected_by="M.Krishnareddy" FT /collection_date="Aug-2006" FT /db_xref="taxon:908118" FT gene 122..460 FT /gene="AV2" FT CDS 122..460 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BQ46" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BQ46" FT /protein_id="ADO41070.1" FT /translation="MWDPLLHEFPETLHGLRCMLAVKYLQDIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKGMDQQADEP FT KTQNVQNV" FT gene 282..1052 FT /gene="AV1" FT CDS 282..1052 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BQ47" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E7BQ47" FT /protein_id="ADO41071.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSVESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYLQGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(312..797) FT /gene="AC5" FT CDS complement(312..797) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:E7BQ48" FT /protein_id="ADO41072.1" FT /translation="MHVLHRCCARFIVKHVKNFPKILWRSCRTPVTNQKKHDTVSMVFC FT LDVFIHPNFSLQIDRFHTKSLPYTMCESGSSRYITNTHDFTDMRYIVPRFNRLHFTGAF FT TSPWNVRTSIHSVHSGFSVHRPVGPCLCFCDAGNGDNCTSSIGAVEVETSAYFRCGR" FT gene complement(1049..1453) FT /gene="AC3" FT CDS complement(1049..1453) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BQ49" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BQ49" FT /protein_id="ADO41073.1" FT /translation="MDSRTGEYITADRAESGVYTWEIRNPLYFKILDHASMPFLTQRDI FT IKIQIQFNHNLRKALGLHKCFLTFQIWTGLRPQIGIFLKVFKTQVLKYLDMLGVIGIYN FT VIRAVYHVLDNVLEQTIDVWTSYDIKPDIY" FT gene complement(1179..1598) FT /gene="AC2" FT CDS complement(1179..1598) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BQ50" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BQ50" FT /protein_id="ADO41074.1" FT /translation="MPSSSHSKNHSIPVAKTSLPQKRKKSIRRRRVDLPCGCTYYISIN FT CHDHGFTHRGVHHCGSSREWRIYLGNSKSPVFQNFGPRQHALPNTARHNQDSDTVQPQP FT AESPGASQVFSNFPNLDGLTPSDWDFLESLQNPGP" FT gene complement(1501..2586) FT /gene="AC1" FT CDS complement(1501..2586) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BQ51" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BQ51" FT /protein_id="ADO41075.1" FT /translation="MAPPSRFRINAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDILEWGVFQIDGRSARGGQQTANDAYAQAINTGNKDEALKVIRELAPKDYVLQFH FT NLITNLDRIFQPRSEVYVSPFSISSFDRVPPELVDWVSENVVCAAARPFRPISVVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNPGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPTEEEEEHSQEAS" FT gene complement(2127..2429) FT /gene="AC4" FT CDS complement(2127..2429) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BQ52" FT /protein_id="ADO41076.1" FT /translation="MGHRISMFLSNSRENSNARITDSSTWCPQVGQHISIRTFRELNQH FT RTSKRTSTKTETSSNGVFSRSMDDLLVVVSKQQTMHMLRRLTQEIKMRPLKSLGS" XX SQ Sequence 2742 BP; 754 A; 581 C; 624 G; 783 T; 0 other; accggatggc cgcgcgattt ttttaggtgg ggcgtcaagc caatgaaatt cgggctacat 60 ggcttctata atgcatatgg agcgataaat agacttgctc accaagtttg gatccacaaa 120 catgtgggat ccactattgc acgaatttcc agaaacgtta catggtctaa ggtgcatgct 180 agctgtaaaa tatctgcaag atatagagaa gaactattcc ccagacacag tcggttacga 240 tcttgtccga gatctgattc ttgttcttcg agcaaagaac tatggcgaag cgaccagcag 300 atatcatcat ttcaacgccc gcatcgaaag tacgccgacg tctcaacttc gacagcccct 360 atggagctcg tgcagttgtc cccattgccc gcgtcacaaa agcaaaggca tggaccaaca 420 ggccgatgaa ccgaaaaccc agaatgtaca gaatgtatag aagtccggac gttccaaggg 480 gatgtgaagg cccctgtaaa gtgcagtctg ttgaatcgag gcacgatgta tctcatatcg 540 gtaaagtcat gtgtgttagt gatgtaacgc gaggaaccgg actcacacat cgtgtaggga 600 agcgattttg tgtgaaatct gtctatctgc agggaaaaat ttggatggat gaaaacatca 660 agacaaaaaa ccatactaac agtgtcatgt tttttttggt tcgtgaccgg cgtccgacag 720 gatcgccaca agattttggg gaagttttta acatgtttga caatgaaccg agcacagcaa 780 cggtgaagaa catgcatcgt gatcgttatc aagtcttacg gaagtggcat gcgaccgtga 840 cgggaggaac atatgcatct agggagcaag cattagttag gaagtttgtt agggttaata 900 attatgtagt ttataatcaa caagaggccg gcaagtatga gaatcatact gaaaacgcat 960 taatgctgta tatggcctgt actcacgcat caaatcctgt atatgctacg ttgaagatcc 1020 ggatctattt ttatgattcg gtaacaaatt aataaatatc cggttttata tcatatgaag 1080 tccatacatc aatcgtttgt tccaatacat tatccaatac atgataaact gctcttatta 1140 cattataaat tcctatgaca cctaacatat ccaggtactt aaggacctgg gttttgaaga 1200 ctttcaagaa aatcccaatc tgagggcgta agcccgtcca gatttggaaa gttagaaaac 1260 acttgtgaag ccccagggct ttccgcaggt tgtggttgaa ctgtatctga atcttgatta 1320 tgtcgcgctg tgttaggaag ggcatgctgg cgtggtccaa aattttgaaa tacaggggat 1380 ttcgaatttc ccaggtatat acgccactct ctgctcgatc cgcagtgatg tactcccctg 1440 tgcgtgaatc catgatcatg gcagttgatc gatatataat acgtacagcc acaaggcaga 1500 tcaactcgcc tcctgcgaat gctcttcttc ctcttctgtg ggagcgatgt tttcgcgacc 1560 ggaatagagt ggttcttcga gtgtgatgaa gacggcattc ttgattgccc actgcttcag 1620 tgctgcattt ttctcctcgt ccagatattc tttatagctg gaattgggtc ctggattgca 1680 gaggaagata gtgggaattc cacctttaat catgaccggc tttccgtact tggtattgct 1740 ttgccagtca cgctgggccc ccatgaattc tttaaaatgc tttagatagt ggggatcgac 1800 gtcatcaatg acgttgtacc aggcatcatt gctatacacc tttgggctca gatctagatg 1860 tccacacaag taattgtgtg gtcctaagca acgagcccac attgttttgc ccgtcctact 1920 atctccctct atgactacac ttattggtct aaaaggccgc gcagcggcac acactacatt 1980 ctcagatacc caatcgacga gttctggcgg aactctgtcg aaggaagaaa ttgaaaatgg 2040 agaaacataa acctcggatc gaggttgaaa aatgcgatct aaatttgtaa ttaaattgtg 2100 aaactgcaga acataatcct ttggtgctaa ctccctaatg actttaaggg cctcatcttt 2160 atttcctgtg ttaatcgcct gagcatatgc atcgtttgct gtttgctgac caccacgagc 2220 agatcgtcca tcgatctgga aaacacccca ttcgaggatg tctccgtctt tgtcgatgta 2280 cgctttgacg tccgatgctg atttagctcc ctgaatgttc ggatggaaat gtgctgaccg 2340 acttggggac accaagtcga agaatctgtt attcttgcat tggaattttc cctcgaattg 2400 gataagaaca tggatatgcg gtgacccatc ctcatgaagc tctcgacaga tcttgatgaa 2460 tttcttcgaa gttggggttt ctagggtttg caattgggaa agtgcctctt cctttgtaag 2520 agagcacttt ggatatgtga ggaaatagtt tttcgcattt attctaaaac gacttggcgg 2580 agccataaaa cttgacgttt cgatccggtg tctctcaact tcttctatgt aattggtgtc 2640 tggagtccca tatataggtg agacactata tggcataatt gtaattttgg aaagaaaatt 2700 actttaattc aaattcccta aagcggccat tcgtataata tt 2742 //