ID GU112081; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC GU112081; XX DT 02-JAN-2011 (Rel. 107, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 3) XX DE Cotton leaf curl Alabad virus isolate OY77 segment DNA-A, complete DE sequence. XX KW . XX OS Cotton leaf curl Alabad virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2744 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2744 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (09-OCT-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; 6a667ca6afe6373ed9d536ca91c19652. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Cotton leaf curl Alabad virus" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY77" FT /mol_type="genomic DNA" FT /geo_loc_name="India: Karnal, Haryana" FT /isolation_source="leaf" FT /collected_by="M.Krishnareddy" FT /collection_date="2005" FT /db_xref="taxon:222456" FT gene 121..486 FT /gene="AV2" FT CDS 121..486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /protein_id="ADO41045.1" FT /translation="MWDPLLNECPDTVHGFRCMLSVKYLQLLSQEYSPDTLGYDLIRDL FT ICIVRSRNYVEASCRYRHFYARIESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ADO41046.1" FT /translation="MSKRAADIVISTPESKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKSKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629..985) FT /gene="AC5" FT CDS complement(629..985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /protein_id="ADO41047.1" FT /translation="MSTSHVKHQCILGVILVFSCFLLVVNNVVINPNKLLDQSLLLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFIYRSSITNKEKHHRIR FT MVLGLDVLVHPDLT" FT gene complement(1054..1458) FT /gene="AC3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /protein_id="ADO41048.1" FT /translation="MDSRTGALITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY" FT gene complement(1151..1603) FT /gene="AC2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /protein_id="ADO41049.1" FT /translation="MRSSSHLKDPCTQVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQNPQPRQPSIHDEHGHNNTQDPFQLQP FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQVSQQSRCNLT" FT gene complement(1500..2591) FT /gene="AC1" FT CDS complement(1500..2591) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /protein_id="ADO41050.1" FT /translation="MPRNNSFCINAKNIFLTFPKCPIPKEQMLDILSNISCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPHTSTQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGTFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELEEWVSENVMDAAARPLRPQSLDIEGD FT SQTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPL FT YSGTNQSTAQGSEEAHQEEESRS" FT gene complement(2177..2434) FT /gene="AC4" FT CDS complement(2177..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="ADO41051.1" FT /translation="MGLCISMHSSNSKVKPSSETPDISMSLTLIPPPNSIQTSRELSPA FT LMLSPTSRRTEITSTGAHFRSMEDLQEEVNRQLMMLLQKP" XX SQ Sequence 2744 BP; 729 A; 536 C; 641 G; 838 T; 0 other; accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg atgcagactc 60 aaagcttaga taacgctcct tagactatca gtacgtgccc actaagtttc aattcaaaaa 120 atgtgggatc cactattaaa cgagtgcccg gatacggttc acggttttcg ttgtatgctt 180 tctgtgaaat atttgcaact tttgtcgcag gagtattcac cagatacgct tggttacgat 240 ttaatacggg atttaatttg tattgtccgt tctcgtaatt atgtcgaagc gagctgcaga 300 tatcgtcatt tctacgcccg aatcgaaagt acgccggcgt ctgaacttcg gcagcccata 360 caccagccgt gctgctgccc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag 420 gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg 480 atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg 540 taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagatc tggatggacg agaacatcaa 660 gtccaagaac catacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccggtaga 720 taaaccacaa gattttggtg aagtatttaa tatgtttgat aacgagccca gtacggcgac 780 cgtgaagaac atgcataggg atcggtacca ggtgttgagg aaatggcatg caaccgttac 840 tggtggacaa tatgcgagta aggagcaggc tttggtcaag aagtttgtta gggttaataa 900 ctacgttgtt tacaaccagc aggaagcagg aaaatacgag aatcacaccg agaatgcatt 960 gatgctttac atggcttgta ctcatgctag caacccagtg tatgctacgc ttaagattcg 1020 tatttatttt tatgactctg taacgaacta atattaataa agtttgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aatacatgtt caacggcttt 1140 aataactaaa ttaagtgaga ttacacctag attgttgaga tacttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgtattccca gagctttccg taggttgtag ttgaaatgga tcctgagtgt 1320 tattatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ttgaggattt tgaaatagag 1380 gggatttgga accttccaga tatagacgcc attctttgct tgagctgcag tgatgagtgc 1440 ccctgtgcga gaatccatgg ttgtggcagt tgattgacag ataataagaa cacccgcatt 1500 caagatctac tctcctcctc ctgatgcgcc tcttcgcttc cctgtgctgt actttgattg 1560 gtacctgagt acaggggtcc ttcaagtgtg atgaagatcg cattctttac tgcccagttc 1620 tttagtgcgg tgttcttttc ctcgtctagg aattctttat aactgctgtt gggaccagga 1680 ttgcagagga agattgttgg tatcccgcct ttaatttgaa ctggcttccc gtactttgtg 1740 ttggattgcc agtccctttg ggcccccatg aactctttaa agtgtttgag gaaatgcggg 1800 tcgacgtcat caatgacatt ataccaggcg tcgttactgt agaccttggg actcaggtcc 1860 agatgtccac acaaatagtt atgtggtccc agtgatctag cccacatcgt cttgccggtc 1920 tgactgtctc cctcaatgtc caaactttga ggtctcagag gccgcgcagc ggcatccatg 1980 acattctcgg agacccactc ttcaagttct tcaggaactt gattaaaaga agaagataaa 2040 aaaggagaaa cataaacctc caacggagga gtgaaaatcc tatctaaatt actatttaaa 2100 ttatgatatt gaaaaataaa tttttctggg agtttttccc ttattatagc catagctgct 2160 tctttagaac ctgcatttag ggcttctgca gcagcatcat tagctgtctg ttgacctcct 2220 cttgcagatc ttccatcgat ctgaaatgtg ccccagtcga tgtaatctcc gtccttctcg 2280 atgtaggact taacatcaga gctggactta gctccctgga agtttggatg gaattgggtg 2340 gaggtatgag ggtgagtgac atcgaaatgt ctggggtttc tgaacttggc tttacctttg 2400 aattggatga gtgcatggat atgcagagac ccatcttggt gtttttcttg tgcaacccta 2460 atgaataatt tgtctgaagg gcatgaaatg ttagataata tatctaacat ctgttctttt 2520 ggaattgggc attttgggaa agtaagaaaa atattttttg catttatgca aaaagaatta 2580 tttctgggca tttttgctat cggggacact taaaactcat atcaattggg gacactgggg 2640 actcatttat actgcgtccc taaatggcat aaatgtaaat atttgccttt atgtttgaat 2700 ttcaaattcc aaacgctcca aaaagcggcc atccgtataa tatt 2744 //