ID GU112076; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC GU112076; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Bhendi yellow vein mosaic virus [India:Karnal:OY79A:2005] segment DNA-A, DE complete sequence. XX KW . XX OS Bhendi yellow vein mosaic virus [India:Karnal:OY79A:2005] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RX DOI; 10.1007/s11262-012-0732-y. RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2740 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2740 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (01-OCT-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; bd6867f4c0dd84fa91545648216a756a. DR EuropePMC; PMC3824786; 28324417. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Bhendi yellow vein mosaic virus FT [India:Karnal:OY79A:2005]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY79A" FT /mol_type="genomic DNA" FT /country="India:Karnal, Haryana" FT /isolation_source="leaf" FT /collected_by="V.Venkataravanappa" FT /collection_date="2005" FT /db_xref="taxon:908096" FT gene 121..486 FT /gene="AV2" FT CDS 121..486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BPY6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BPY6" FT /protein_id="ADO41010.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYPRVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BPY7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BPY7" FT /protein_id="ADO41011.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629..985) FT /gene="AC5" FT CDS complement(629..985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="GOA:E7BPY8" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:E7BPY8" FT /protein_id="ADO41012.1" FT /translation="MGTSHIKHQRILRMILVFSCFLLVVNNIIVNPNKLLDQRLFLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYLTKILWFIYRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1054..1458) FT /gene="AC3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BPY9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BPY9" FT /protein_id="ADO41013.1" FT /translation="MDSLTGARITATHSTNGVFIWEVPNPLYFNILNHDNRPFTTNMDI FT ITMRIHFNYNLRKALGMHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY" FT gene complement(1151..1603) FT /gene="AC2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BPZ0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BPZ0" FT /protein_id="ADO41014.1" FT /translation="MQHSSSSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCTYYLCIN FT CHNHGFSHRGTHHCNSFNEWRLYLGGSKSPLFQYPQPRQPSIHDEHGHHNNEDPFQLQP FT SESSGNAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQVSQQSRCNLN" FT gene complement(1500..2591) FT /gene="AC1" FT CDS complement(1500..2591) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BPZ1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BPZ1" FT /protein_id="ADO41015.1" FT /translation="MPPSKRFQIYSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIK FT ICRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALKVIRELAPKDYVLQFH FT NLNANLDRIFTPPLEVYVSPFSSSSFDQVPEELEEWVSENVVDAAARPLRPLSLVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKGFLDEEKNSALKAWALKNAAFVFLTEPL FT YSGTNQSSAQGSEETHQEEESGS" FT gene complement(2132..2434) FT /gene="AC4" FT CDS complement(2132..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BPZ2" FT /protein_id="ADO41016.1" FT /translation="MGNLIFTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSKQPTTLTPQHLTQAVSQRLLKSLGS" XX SQ Sequence 2740 BP; 729 A; 551 C; 652 G; 808 T; 0 other; accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg atgcagactc 60 aaagcttaga taacgctcct tcggctataa gtacttgcgc actaagtttc aattcaaaaa 120 atgtgggatc cactattaaa cgagttcccg gatacggttc acgggtttcg ttgtatgcta 180 tctgtaaaat atttgcaact tttgtcgcag gattattctc cagataccct tggttacgag 240 ttaatacggg atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga 300 tatcgtcatt tctacccccg cgtcgaaagt acgccggcgt ctgaacttcg gcagcccata 360 caccagccgt gctgctgccc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag 420 gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg 480 atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg 540 taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg agaacatcaa 660 gaccaagaac catacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccggtaga 720 taaaccacag gattttggtg aggtatttaa tatgtttgat aacgagccca gtacggcgac 780 cgtgaagaac atgcataggg atcggtacca ggtgttgagg aaatggcatg caaccgttac 840 tggtggacaa tatgcgagta aggaacaggc gttggtcaag aagtttgtta gggttaacaa 900 ttatgttgtt tacaaccaac aggaagcagg aaaatacgag aatcatacgg agaatgcgtt 960 gatgctttat atggcttgta cccatgctag caacccagtg tatgctacgc tgaagattcg 1020 gatttatttt tatgactctg taacgaattg aaattaataa agtttgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aatacatgtt caacagcttt 1140 aataactaaa ttaattgaga ttacacctag attgttgaga tacttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgcattccca gagctttccg aaggttgtag ttgaaatgga tcctcattgt 1320 tatgatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ttgaggatat tgaaataaag 1380 gggatttgga acctcccaga taaagacgcc attcgttgaa tgagttgcag tgatgcgtgc 1440 ccctgtgaga gaatccatgg ttgtggcagt tgatacatag gtaataggtg catccgcatt 1500 caagatccac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctga actttgattg 1560 gtacccgagt acaacggttc ggtgaggaag acgaatgctg cattttttaa agcccacgct 1620 tttaaagctg agttcttttc ctcgtccaag aaccctttat agcttgcgtt ggggcctgga 1680 ttgcagagga agattgttgg aatgccccct ttaatttgaa ctggcttccc gtactttgtg 1740 tttgattgcc agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg 1800 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg gctcagatcc 1860 aagtgcccac acaaataatt atgtgggcct aatgacctag cccacattgt tttgccagta 1920 cgactgtctc cctctaagac taaactcaaa ggacgcagag gccgcgcagc ggcgtccacg 1980 acattttcag atacccattc ttcaagttct tctggaactt gatcgaaaga agaagatgaa 2040 aaaggagaaa cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa 2100 ttatgaaatt gtaatacata atccttaggt gctaactccc taatgacttt aagagcctct 2160 gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt tggctgtttg ctgtccccct 2220 cttgcagatc gtccatcgat ctgaaactct ccccattcga gggtgtctcc gtccttgtcg 2280 atgtaggact tgacatctga gcttgattta gctccctgaa tgttcggatg gaaatgtact 2340 gacctgcttg gggagaccag gtcgaagaat cgctgattct ggcacttgta tttgccctcg 2400 aactggatga gcacgtgaag atgaggttcc ccatcctcgt gaagctctct gcagatcttg 2460 atgaattttt tatttgttgg ggtttgtagg ttttggagtt gggaaagtgc ttcctcttta 2520 gtaagagagc attttggata agtaaggaaa taatttttgg aatatatttg aaaacgttta 2580 gaaggtggca tgactaaaat tgagtaccga ttgactccct ctggcaactc tctctggtat 2640 atcgggaccc aatatatagt gagtaccaaa tggcgtatgt gtaattttgt aatgaaattc 2700 aaaatcctcg cgcgccagaa gcggccatcc gtataatatt 2740 //