ID GU112004; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC GU112004; XX DT 02-JAN-2011 (Rel. 107, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 3) XX DE Cotton leaf curl Alabad virus isolate OY81B segment DNA-A, complete DE sequence. XX KW . XX OS Cotton leaf curl Alabad virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2744 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2744 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (26-SEP-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; 9d2c6768c5bda6e19d7284d597fe5b67. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Cotton leaf curl Alabad virus" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY81B" FT /mol_type="genomic DNA" FT /geo_loc_name="India: Karnal, Haryana" FT /isolation_source="leaf" FT /collected_by="M.Krishnareddy" FT /collection_date="2005" FT /db_xref="taxon:222456" FT gene 121..486 FT /gene="AV2" FT CDS 121..486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /protein_id="ADO40510.1" FT /translation="MWDPLVNELRIRFTGFVICYLVKYLQLLSLEYSPVTLGYELIRDL FT ICIVRSRNYVEASCRYRHFYARVESTPASELRQRIHQPCCCPHCPRYKTTGMVKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ADO40511.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSAYTSRAAAPIVRVTKQQAWS FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWTDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLSKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629..985) FT /gene="AC5" FT CDS complement(629..985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /protein_id="ADO40512.1" FT /translation="MGTSHIKHQRILRVILVFSCLLLVVNNIIVNPNKLLNQRLFLTRI FT LSTSNGCMPFTQHLVPIPMHVLNGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR FT MVLGLDVLVRPYLT" FT gene complement(1054..1458) FT /gene="AC3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /protein_id="ADO40513.1" FT /translation="MDSRTGERITAAHSTNGVFIWEVPNPLYFKILSHDNRPFTTNMDI FT ITMRIQFNYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1151..1603) FT /gene="AC2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /protein_id="ADO40514.1" FT /translation="MQHSSFSPNRSTPVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSFNEWRLYLGGSKSPLFQNPQPRQPSIHDEHGHHNNEDPIQLQP FT SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLT" FT gene complement(1500..2591) FT /gene="AC1" FT CDS complement(1500..2591) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /protein_id="ADO40515.1" FT /translation="MPRNNSFCINAKNIFLTFPKCPIPKEQMLDILSNISCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPHTSTQFHPNFQGAKSSSDVKTYM FT EKDGDILDHGVFQVDGRSARGGCQTANDAYAEAINAGSKAQALKVLRELAPRDFLLQFH FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAGRPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFVFLTQPL FT YSGTNQSSTQGSEESAQEETSGP" FT gene complement(2132..2434) FT /gene="AC4" FT CDS complement(2132..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="ADO40516.1" FT /translation="MGLCISMHSSNSKVKPSSETPDISMSLTLIPPPNSIQTSRELNPA FT PMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSKSLGS" XX SQ Sequence 2744 BP; 732 A; 527 C; 661 G; 824 T; 0 other; accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg atgcagactc 60 aaagcttaga taacgctcct tcggctataa gtacgtgcgc actaagtttc aaattgaaac 120 atgtgggatc cactagtaaa cgaactccgg atacggttca cgggtttcgt tatatgctat 180 ctggtaaaat atctgcaact tttgtcgctg gagtattcac cagttacgct tgggtacgag 240 ttaatacggg atttaatttg tattgtacgc tctcgtaatt atgtcgaagc gagctgccga 300 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg gcagcgcata 360 caccagccgt gctgctgccc ccattgtccg cgttacaaaa caacaggcat ggtcaaacag 420 gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg 480 atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg 540 taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggacggacg agaacatcaa 660 gaccaagaac catacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccgacaga 720 taaaccacaa gattttggtg aagtatttaa tatgtttgat aacgagccca gtacggcgac 780 cgttaagaac atgcataggg atcggtacca ggtgttgagt aaatggcatg caaccgttac 840 tggtggacaa tatgcgagta aggaacaggc gttggttaag aagtttgtta gggttaacaa 900 ttatgttgtt tacaaccagc aggaggcagg aaaatacgag aatcacacgg agaatgcgtt 960 gatgctttat atggcttgta cccatgctag caacccagtt tatgctacgc ttaagattcg 1020 gatatatttt tatgactctg taacgaattg aaattaataa agattgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aatacatgtt cgacggcttt 1140 aataactaaa ttaagtgaga ttacacctag attgttgaga tatttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgcactccca gagctttccg aaggttgtag ttgaattgga tcctcattgt 1320 tatgatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ctgaggattt tgaaataaag 1380 gggatttgga acctcccaga taaagacgcc attcgttgaa tgagctgcag tgatgcgttc 1440 ccctgtgcga gaatccatgg ttgtggcagt tgatacttag gtaatagctg catccacact 1500 caaggtccac tcgtttcctc ctgtgcgctc tcttcgcttc cctgtgttga actttgattg 1560 gtaccggagt agagcggttg ggtgagaaag acgaatgttg cattttttaa agcccaggat 1620 tttaaggctg agttcttatc ctcgtctaag aactctttat agctggcgtt gggtcctgga 1680 ttgcagagga agattgttgg tatgccgcct ttaatttgaa ctggcttccc gtactttgtg 1740 tttgattgcc agtccctttg ggcccccatg aactctttaa agtgtttgag gaagtgcgga 1800 tcgacatcat caatgacgtt ataccacgca tcattgctgt aaactttggg gcttaaatct 1860 aaatgaccac ataagtaatt atgtggccct aacgacctag cccacattgt ttttccagta 1920 cgactatctc cctcaattac tatactttga ggtctcaggg gccgcccagc ggcatcgaca 1980 acgttctcgc acgcccactc ttcaagttct tctggaactt gatcaaatga agaagaagaa 2040 aaaggagaaa cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa 2100 ttatgaaatt gaagtagaaa gtctcttggg gctaactccc taaggacttt gagggcctga 2160 gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt tggcagtttg gcaacctcct 2220 ctagctgatc ttccatcgac ttggaaaact ccatgatcaa ggatgtctcc gtctttctcc 2280 atgtaggttt tgacatcgga gctggattta gctccctgga agtttggatg gaattgggtg 2340 gaggtatgag ggtgagtgac atcgaaatgt ctggggtttc tgaacttggc tttacctttg 2400 aattggatga gtgcatggat atgcagagac ccatcttggt gtttttcttg tgcaacccta 2460 atgaataatt tgtctgaagg gcatgaaatg ttagataata tatctaacat ctgttctttt 2520 ggaattgggc attttgggaa agtaagaaaa atattttttg catttatgca aaaagaatta 2580 tttctgggca tttttgctat cggggacact taaaactcat atcaattggg gacactgggg 2640 actcatttat actgcgtccc taaatggcat aaatgtaaat atttgccttt atgtttgaat 2700 ttcaaattcc aaacgctcca aaaagcggcc atccgtataa tatt 2744 //